ONTOLOGY REPORT - ANNOTATIONS

Term:Germinoma
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Accession:RDO:0005406 term browser browse the term
Definition:A malignant neoplasm of the germinal tissue of the GONADS; MEDIASTINUM; or pineal region. Germinomas are uniform in appearance, consisting of large, round cells with vesicular nuclei and clear or finely granular eosinophilic-staining cytoplasm. (Stedman, 265th ed; from DeVita Jr et al., Cancer: Principles & Practice of Oncology, 3d ed, pp1642-3)
Synonyms:exact_synonym: Germinomas
 primary_id: MESH:D018237

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Germinoma term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Braf v-raf murine sarcoma viral oncogene homolog B1 GBrowse link ISS 4 67,117,759 67,243,058 RGD:2315865 RGD
G Ccnd2 cyclin D2 GBrowse link ISS 4 163,523,817 163,546,501 RGD:2296039 RGD
G Cdkn2a cyclin-dependent kinase inhibitor 2A GBrowse link ISS 5 108,908,749 108,916,380 RGD:2289698 RGD
G Cdkn2a_v1 cyclin-dependent kinase inhibitor 2A, variant 1 ISS RGD:2289698 RGD
G Cdkn2a_v2 cyclin-dependent kinase inhibitor 2A, variant 2 ISS RGD:2289698 RGD
G Mgp matrix Gla protein GBrowse link ISS 4 173,910,595 173,913,917 RGD:2293578 RGD
G Pdpn podoplanin GBrowse link ISS 5 162,142,251 162,175,921 RGD:2292236 RGD
Dysgerminoma term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Amhr2 anti-Mullerian hormone receptor, type II GBrowse link ISS 7 141,203,832 141,212,653 RGD:2315651 RGD
G Fgfr2 fibroblast growth factor receptor 2 GBrowse link ISS 1 189,482,975 189,589,279 RGD:2289660 RGD
G Inha inhibin alpha GBrowse link ISS 9 74,781,223 74,784,124 RGD:2290380 RGD
G Kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog GBrowse link ISS 14 34,906,043 34,984,819 RGD:2292181 RGD
G Pou5f1 POU class 5 homeobox 1 ISS RGD:2292443 RGD
G St14 suppression of tumorigenicity 14 (colon carcinoma) GBrowse link ISS 8 30,916,769 30,932,214 RGD:2315091 RGD
Seminoma term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Ccnd2 cyclin D2 GBrowse link ISS 4 163,523,817 163,546,501 RGD:2289154 RGD
G Chek2 checkpoint kinase 2 GBrowse link ISS 12 45,933,900 45,965,427 RGD:2298484 RGD
G Fas Fas (TNF receptor superfamily, member 6) GBrowse link ISS 1 238,259,443 238,274,745 RGD:2290049 RGD
G Faslg Fas ligand (TNF superfamily, member 6) GBrowse link ISS 13 77,472,950 77,480,210 RGD:2290049 RGD
G Fhit fragile histidine triad GBrowse link ISS 15 15,823,461 17,329,184 RGD:2289879 RGD
G Hmbs hydroxymethylbilane synthase GBrowse link ISS 8 47,314,235 47,321,604 RGD:2301683 RGD
G Hras Harvey rat sarcoma virus oncogene GBrowse link ISS 1 201,385,705 201,388,987 RGD:2314832 RGD
G Inha inhibin alpha GBrowse link ISS 9 74,781,223 74,784,124 RGD:2290380 RGD
G Insr insulin receptor GBrowse link ISS 12 2,934,967 3,087,691 RGD:2290460 RGD
G Jup junction plakoglobin GBrowse link ISS 10 89,307,938 89,335,254 RGD:2291872 RGD
G Kcne1 potassium voltage-gated channel, Isk-related family, member 1 GBrowse link ISS 11 32,344,529 32,355,189 RGD:1580497 RGD
G Kcnq1 potassium voltage-gated channel, KQT-like subfamily, member 1 GBrowse link ISS 1 203,383,401 203,803,687 RGD:1580497 RGD
G Kit v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog GBrowse link ISS 14 34,906,043 34,984,819 RGD:2292181 RGD
G Kras v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog GBrowse link ISS 4 182,869,242 182,895,106 RGD:2314915 RGD
G Pcna proliferating cell nuclear antigen GBrowse link Disease_progression ISS 3 120,008,715 120,012,589 RGD:2315012 RGD
G Pdgfra platelet derived growth factor receptor, alpha polypeptide GBrowse link ISS 14 35,369,422 35,418,126 RGD:2292154 RGD
G Pdpn podoplanin GBrowse link ISS 5 162,142,251 162,175,921 RGD:2292234 RGD
G Pla2g16 phospholipase A2, group XVI GBrowse link ISS 1 210,281,109 210,315,280 RGD:2290002 RGD
G Pou5f1 POU class 5 homeobox 1 ISS RGD:2292429 RGD
G Pou5f1 POU class 5 homeobox 1 ISS RGD:2292432 RGD
G Pou5f1 POU class 5 homeobox 1 ISS RGD:2292433 RGD
G Prmt5 protein arginine methyltransferase 5 GBrowse link ISS 15 32,574,951 32,584,336 RGD:2299953 RGD
G Rb1 retinoblastoma 1 GBrowse link ISS 15 53,828,881 53,962,099 RGD:2299891 RGD
G Smad4 SMAD family member 4 GBrowse link ISS 18 70,432,705 70,461,541 RGD:2299975 RGD
G Tspy1 testis specific protein, Y-linked 1 ISS RGD:2315445 RGD
G Tymp thymidine phosphorylase GBrowse link ISS 7 127,666,518 127,671,624 RGD:2293724 RGD
G Vegfa vascular endothelial growth factor A GBrowse link Disease_progression ISS 9 10,520,730 10,536,071 RGD:2315467 RGD
G Xrcc1 X-ray repair complementing defective repair in Chinese hamster cells 1 GBrowse link Susceptibility ISS 1 79,834,167 79,860,300 RGD:2302576 RGD
G Zfp354a zinc finger protein 354A GBrowse link ISS 10 36,654,406 36,665,659 RGD:2291889 RGD
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  Diseases 30477
    Neoplasms 5210
      Neoplasms by Histologic Type 1784
        Neoplasms, Germ Cell and Embryonal 308
          Germinoma 42
            Dysgerminoma 6
            Seminoma 29
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