ONTOLOGY REPORT - ANNOTATIONS

Term:Arthritis, Rheumatoid
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Accession:RDO:0002315 term browser browse the term
Definition:A chronic systemic disease, primarily of the joints, marked by inflammatory changes in the synovial membranes and articular structures, widespread fibrinoid degeneration of the collagen fibers in mesenchymal tissues, and by atrophy and rarefaction of bony structures. Etiology is unknown, but autoimmune mechanisms have been implicated.
Synonyms:exact_synonym: RA;   RHEUMATOID ARTHRITIS, SUSCEPTIBILITY TO
 primary_id: MESH:D001172
 alt_id: OMIM:114835;   OMIM:180300;   OMIM:600558

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Arthritis, Rheumatoid term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G A2m alpha-2-macroglobulin GBrowse link IEA 4 158,103,711 158,153,423 RGD:1331525 RGD
G Adipoq adiponectin, C1Q and collagen domain containing GBrowse link ISS 11 79,908,291 79,911,065 RGD:5686424 RGD
G Adrb3 adrenoceptor beta 3 GBrowse link ISS 16 69,163,620 69,166,384 RGD:5684893 RGD
G Adrbk1 adrenergic, beta, receptor kinase 1 GBrowse link ISS 1 206,873,002 206,892,868 RGD:5688373 RGD
G Adrbk1 adrenergic, beta, receptor kinase 1 GBrowse link ISS 1 206,873,002 206,892,868 RGD:5688380 RGD
G Ager advanced glycosylation end product-specific receptor GBrowse link ISS 20 4,250,613 4,253,540 RGD:704409 RGD
G Ang angiogenin, ribonuclease, RNase A family, 5 GBrowse link ISS 15 27,083,089 27,083,526 RGD:6892721 RGD
G Apoa4 apolipoprotein A-IV GBrowse link ISS 8 49,233,142 49,233,431 RGD:5685646 RGD
G Bglap bone gamma-carboxyglutamate (gla) protein GBrowse link ISS 2 180,482,313 180,483,290 RGD:6483600 RGD
G Bglap bone gamma-carboxyglutamate (gla) protein GBrowse link ISS 2 180,482,313 180,483,290 RGD:6483593 RGD
G Bst1 bone marrow stromal cell antigen 1 GBrowse link ISS 14 72,404,263 72,414,500 RGD:704409 RGD
G C4b complement component 4B (Chido blood group) GBrowse link ISS 20 4,300,687 4,315,882 RGD:5688263 RGD
G Casp7 caspase 7 GBrowse link ISS 1 262,689,300 262,721,591 RGD:5684540 RGD
G Cast calpastatin GBrowse link ISS 2 1,495,048 1,608,477 RGD:5683620 RGD
G Ccl2 chemokine (C-C motif) ligand 2 GBrowse link ISS 10 70,256,263 70,258,061 RGD:4891442 RGD
G Ccr1 chemokine (C-C motif) receptor 1 GBrowse link ISS 8 128,693,658 128,699,213 RGD:5688170 RGD
G Ccr3 chemokine (C-C motif) receptor 3 GBrowse link ISS 8 128,759,943 128,769,341 RGD:4145632 RGD
G Ccr5 chemokine (C-C motif) receptor 5 GBrowse link No_Association ISS 8 128,907,157 128,912,272 RGD:1626283 RGD
G Ccr5 chemokine (C-C motif) receptor 5 GBrowse link Resistance ISS 8 128,907,157 128,912,272 RGD:1626290 RGD
G Cd244 Cd244 molecule, natural killer cell receptor 2B4 GBrowse link ISS 13 87,513,413 87,531,211 RGD:7240710 OMIM
G Cd28 Cd28 molecule GBrowse link ISS 9 59,342,273 59,367,743 RGD:5131619 RGD
G Cd40 CD40 molecule, TNF receptor superfamily member 5 GBrowse link ISS 3 156,092,602 156,107,427 RGD:5490972 RGD
G Cd80 Cd80 molecule GBrowse link ISS 11 64,045,358 64,070,072 RGD:6893647 RGD
G Chi3l1 chitinase 3-like 1 (cartilage glycoprotein-39) GBrowse link Severity ISS 13 47,139,658 47,147,591 RGD:4892605 RGD
G Ciita class II, major histocompatibility complex, transactivator GBrowse link Susceptibility ISS 10 5,087,174 5,133,418 RGD:1358146 RGD
G Ciita class II, major histocompatibility complex, transactivator GBrowse link No_Association ISS 10 5,087,174 5,133,418 RGD:5491189 RGD
G Ciita class II, major histocompatibility complex, transactivator GBrowse link ISS 10 5,087,174 5,133,418 RGD:5491176 RGD
G Clec16a C-type lectin domain family 16, member A GBrowse link ISS 10 4,870,719 5,069,691 RGD:5491176 RGD
G Crp C-reactive protein, pentraxin-related GBrowse link IED 13 88,702,243 88,703,153 RGD:6904209 RGD
G Crp C-reactive protein, pentraxin-related GBrowse link ISS 13 88,702,243 88,703,153 RGD:6904209 RGD
G Cx3cl1 chemokine (C-X3-C motif) ligand 1 GBrowse link ISS 19 10,666,940 10,676,424 RGD:4892002 RGD
G Cxcr3 chemokine (C-X-C motif) receptor 3 GBrowse link ISS X 89,794,276 89,796,927 RGD:4145632 RGD
G Esr2 estrogen receptor 2 (ER beta) GBrowse link Severity ISS 6 98,691,167 98,775,299 RGD:5508794 RGD
G F2rl1 coagulation factor II (thrombin) receptor-like 1 GBrowse link ISS 2 25,886,177 25,899,128 RGD:735010 RGD
G Fcgr2a Fc fragment of IgG, low affinity IIa, receptor GBrowse link ISS 13 86,898,651 86,911,743 RGD:5147984 RGD
G Fcgr2a Fc fragment of IgG, low affinity IIa, receptor GBrowse link ISS 13 86,898,651 86,911,743 RGD:5147978 RGD
G Fcgr3a Fc fragment of IgG, low affinity IIIa, receptor GBrowse link Susceptibility ISS 13 86,867,641 86,877,665 RGD:5508391 RGD
G Fcgr3a Fc fragment of IgG, low affinity IIIa, receptor GBrowse link ISS 13 86,867,641 86,877,665 RGD:5508467 RGD
G Gc group specific component GBrowse link ISS 14 20,166,243 20,197,060 RGD:5509931 RGD
G Grk5 G protein-coupled receptor kinase 5 GBrowse link No_Association ISS 1 267,495,534 267,693,144 RGD:5688373 RGD
G Grk5 G protein-coupled receptor kinase 5 GBrowse link No_Association ISS 1 267,495,534 267,693,144 RGD:5688380 RGD
G Grk6 G protein-coupled receptor kinase 6 GBrowse link ISS 17 15,220,992 15,236,617 RGD:5688380 RGD
G Grk6 G protein-coupled receptor kinase 6 GBrowse link ISS 17 15,220,992 15,236,617 RGD:5688373 RGD
G Gstm1 glutathione S-transferase mu 1 GBrowse link ISS 2 203,575,444 203,580,821 RGD:5490993 RGD
G Gstm1 glutathione S-transferase mu 1 GBrowse link Susceptibility ISS 2 203,575,444 203,580,821 RGD:5490994 RGD
G Gstm1 glutathione S-transferase mu 1 GBrowse link Susceptibility ISS 2 203,575,444 203,580,821 RGD:5490998 RGD
G Gstt1 glutathione S-transferase theta 1 GBrowse link Susceptibility ISS 20 13,604,355 13,621,456 RGD:5490983 RGD
G Gstt1 glutathione S-transferase theta 1 GBrowse link ISS 20 13,604,355 13,621,456 RGD:5490982 RGD
G Gstt1 glutathione S-transferase theta 1 GBrowse link Severity ISS 20 13,604,355 13,621,456 RGD:5490553 RGD
G Hspa4 heat shock protein 4 GBrowse link ISS 10 38,705,629 38,749,058 RGD:5688784 RGD
G Hspa5 heat shock protein 5 GBrowse link ISS 3 13,783,825 13,788,022 RGD:5685639 RGD
G Igf2 insulin-like growth factor 2 GBrowse link ISS 1 202,906,624 202,915,231 RGD:5510014 RGD
G Igf2 insulin-like growth factor 2 GBrowse link ISS 1 202,906,624 202,915,231 RGD:5510001 RGD
G Il10 interleukin 10 GBrowse link ISS 13 43,953,900 43,957,766 RGD:7240710 OMIM
G Il1a interleukin 1 alpha GBrowse link ISS 3 116,913,612 116,924,114 RGD:4142818 RGD
G Il1b interleukin 1 beta GBrowse link ISS 3 116,964,422 116,970,867 RGD:6482656 RGD
G Il1rn interleukin 1 receptor antagonist GBrowse link ISS 3 2,607,800 2,613,216 RGD:7174696 RGD
G Il20 interleukin 20 GBrowse link ISS 13 43,860,611 43,863,964 RGD:5147395 RGD
G Il21r interleukin 21 receptor GBrowse link ISS 1 184,665,737 184,693,583 RGD:6892964 RGD
G Il3 interleukin 3 GBrowse link ISS 10 39,684,691 39,687,041 RGD:5686905 RGD
G Il5 interleukin 5 GBrowse link ISS 10 39,177,786 39,180,657 RGD:5687156 RGD
G Jak2 Janus kinase 2 GBrowse link ISS 1 232,915,995 232,974,763 RGD:6483024 RGD
G Lrrk2 leucine-rich repeat kinase 2 GBrowse link ISS 7 130,105,902 130,267,747 RGD:5508419 RGD
G Mdk midkine GBrowse link ISS 3 76,309,988 76,311,345 RGD:1581200 RGD
G Mmp1 matrix metallopeptidase 1 (interstitial collagenase) GBrowse link ISS 8 4,333,773 4,354,284 RGD:7207129 RGD
G Mmp3 matrix metallopeptidase 3 GBrowse link ISS 8 4,315,601 4,329,146 RGD:7241254 RGD
G Mmp3 matrix metallopeptidase 3 GBrowse link ISS 8 4,315,601 4,329,146 RGD:7207128 RGD
G Mmp8 matrix metallopeptidase 8 GBrowse link ISS 8 4,402,124 4,410,976 RGD:7207131 RGD
G Mmp9 matrix metallopeptidase 9 GBrowse link ISS 3 155,985,473 155,993,433 RGD:1582623 RGD
G Mt-nd1 mitochondrially encoded NADH dehydrogenase 1 GBrowse link ISS MT 2,740 3,694 RGD:5490238 RGD
G Nfkbil1 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 GBrowse link ISS 20 3,629,246 3,644,222 RGD:1331681 RGD
G Nfkbil1 nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1 GBrowse link ISS 20 3,629,246 3,644,222 RGD:7240710 OMIM
G Notch4 notch 4 GBrowse link ISS 20 4,263,205 4,287,312 RGD:6480790 RGD
G Npsr1 neuropeptide S receptor 1 GBrowse link ISS 8 23,736,081 23,970,242 RGD:4891930 RGD
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 GBrowse link IEP 18 32,371,496 32,459,145 RGD:4892311 RGD
G Padi4 peptidyl arginine deiminase, type IV GBrowse link ISS 5 159,580,718 159,614,628 RGD:7240710 OMIM
G Pdgfb platelet-derived growth factor beta polypeptide GBrowse link ISS 7 118,244,385 118,262,021 RGD:6482653 RGD
G Pgf placental growth factor GBrowse link ISS 6 109,215,540 109,226,122 RGD:6483591 RGD
G Pla2g7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma) GBrowse link ISS 9 13,057,988 13,100,289 RGD:6482776 RGD
G Plaur plasminogen activator, urokinase receptor GBrowse link ISS 1 79,708,646 79,712,881 RGD:6484117 RGD
G Ptgs2 prostaglandin-endoperoxide synthase 2 GBrowse link ISS 13 64,427,288 64,432,978 RGD:5508313 RGD
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) GBrowse link ISS 2 199,083,186 199,144,309 RGD:6484595 RGD
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) GBrowse link ISS 2 199,083,186 199,144,309 RGD:6484535 RGD
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) GBrowse link ISS 2 199,083,186 199,144,309 RGD:7240710 OMIM
G RT1-Ba RT1 class II, locus Ba GBrowse link ISS 20 4,697,971 4,702,564 RGD:5147860 RGD
G RT1-Ba RT1 class II, locus Ba GBrowse link ISS 20 4,697,971 4,702,564 RGD:5147859 RGD
G RT1-Bb RT1 class II, locus Bb GBrowse link ISS 20 4,730,559 4,736,201 RGD:5147860 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:4144826 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:5147616 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link Susceptibility ISS 20 4,671,489 4,681,058 RGD:5147567 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:5147860 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:7240710 OMIM
G Runx1 runt-related transcription factor 1 GBrowse link No_Association ISS 11 32,623,461 32,725,404 RGD:6482837 RGD
G Runx1 runt-related transcription factor 1 GBrowse link ISS 11 32,623,461 32,725,404 RGD:6482836 RGD
G Runx1 runt-related transcription factor 1 GBrowse link No_Association ISS 11 32,623,461 32,725,404 RGD:6482840 RGD
G Runx1 runt-related transcription factor 1 GBrowse link No_Association ISS 11 32,623,461 32,725,404 RGD:6482839 RGD
G Sema3c sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C GBrowse link ISS 4 13,739,659 13,914,636 RGD:1580084 RGD
G Slc11a1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 GBrowse link Severity ISS 9 73,714,692 73,725,523 RGD:5684967 RGD
G Slc11a1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 GBrowse link ISS 9 73,714,692 73,725,523 RGD:5684971 RGD
G Spp1 secreted phosphoprotein 1 ISS RGD:1581382 RGD
G Stat3 signal transducer and activator of transcription 3 (acute-phase response factor) GBrowse link ISS 10 89,821,078 89,872,970 RGD:6892936 RGD
G Stat4 signal transducer and activator of transcription 4 GBrowse link ISS 9 46,510,251 46,650,076 RGD:7240710 OMIM
G Tap2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) GBrowse link ISS 20 4,770,446 4,784,488 RGD:6482275 RGD
G Thbd thrombomodulin GBrowse link ISS 3 137,158,955 137,162,607 RGD:5685020 RGD
G Vim vimentin GBrowse link ISS 17 87,847,280 87,855,763 RGD:6480508 RGD
Q Aia10 Adjuvant induced arthritis QTL 10 GBrowse link Induced IAGP 15 83,677,810 109,758,846 RGD:2316974 RGD
Q Aia11 Adjuvant induced arthritis QTL 11 GBrowse link Induced IAGP 17 71,569,891 77,806,121 RGD:2316974 RGD
Q Aia12 Adjuvant induced arthritis QTL 12 GBrowse link Induced IAGP 17 49,069,974 94,069,974 RGD:2316974 RGD
Q Aia13 Adjuvant induced arthritis QTL 13 GBrowse link Induced IAGP 2 77,630,629 79,118,861 RGD:2316974 RGD
Q Aia14 Adjuvant induced arthritis QTL 14 Induced IAGP RGD:2316974 RGD
Q Aia15 Adjuvant induced arthritis QTL 15 GBrowse link Induced IAGP 7 21,202,126 66,202,126 RGD:2316974 RGD
Q Aia16 Adjuvant induced arthritis QTL 16 GBrowse link Induced IAGP 7 65,025,373 110,025,373 RGD:2316974 RGD
Q Aia17 Adjuvant induced arthritis QTL 17 GBrowse link Induced IAGP 7 87,525,274 132,525,274 RGD:2316974 RGD
Q Aia18 Adjuvant induced arthritis QTL 18 GBrowse link Induced IAGP 8 10,116,155 55,116,155 RGD:2316974 RGD
Q Aia19 Adjuvant induced arthritis QTL 19 GBrowse link Induced IAGP 10 70,229,781 115,229,781 RGD:2316974 RGD
Q Aia20 Adjuvant induced arthritis QTL 20 GBrowse link Induced IAGP 10 41,317,054 86,317,054 RGD:2316974 RGD
Q Aia21 Adjuvant induced arthritis QTL 21 GBrowse link Induced IAGP 13 10,688,543 55,688,543 RGD:2316974 RGD
Q Aia22 Adjuvant induced arthritis QTL 22 GBrowse link Induced IAGP 13 1 23,584,369 RGD:2316974 RGD
Q Aia23 Adjuvant induced arthritis QTL 23 GBrowse link Induced IAGP 13 1,084,268 33,188,609 RGD:2316974 RGD
Q Aia24 Adjuvant induced arthritis QTL 24 GBrowse link Induced IAGP 15 58,412,001 80,362,100 RGD:2316974 RGD
Q Aia25 Adjuvant induced arthritis QTL 25 GBrowse link Induced IAGP 17 59,104,944 71,569,891 RGD:2316974 RGD
Q Aia26 Adjuvant induced arthritis QTL 26 GBrowse link Induced IAGP 17 49,069,974 94,069,974 RGD:2316974 RGD
Q Aia27 Adjuvant induced arthritis QTL 27 GBrowse link Induced IAGP 20 3,039,759 37,383,914 RGD:2316974 RGD
Q Aia6 Adjuvant induced arthritis QTL 6 GBrowse link Induced IAGP 10 70,229,781 115,229,781 RGD:2316974 RGD
Q Aia7 Adjuvant induced arthritis QTL 7 GBrowse link Induced IAGP 10 41,317,054 86,317,054 RGD:2316974 RGD
Q Aia8 Adjuvant induced arthritis QTL 8 GBrowse link Induced IAGP 13 10,688,543 55,688,543 RGD:2316974 RGD
Q Aia9 Adjuvant induced arthritis QTL 9 GBrowse link Induced IAGP 13 1,084,268 33,188,609 RGD:2316974 RGD
Q Apr1 Acute phase response QTL 1 GBrowse link IED 12 20,418,353 46,782,294 RGD:629561 RGD
Q Apr2 Acute phase response QTL 2 GBrowse link IED 5 142,573,432 173,096,209 RGD:629561 RGD
Q Apr3 Acute phase response QTL 3 GBrowse link IED 10 16,579,339 61,579,339 RGD:629561 RGD
Q Apr4 Acute phase response QTL 4 GBrowse link IED 12 2,248,421 46,782,294 RGD:629561 RGD
Q Apr5 Acute phase response QTL 5 GBrowse link IED 12 568,621 45,568,621 RGD:629561 RGD
Q Apr6 Acute phase response QTL 6 GBrowse link IED 14 1 42,665,455 RGD:629561 RGD
Q Cia1 Collagen induced arthritis QTL 1 GBrowse link IED 20 3,660,646 14,605,852 RGD:61062 RGD
Q Cia10 Collagen induced arthritis QTL 10 GBrowse link IED 2 188,136,088 233,136,088 RGD:61063 RGD
Q Cia11 Collagen induced arthritis QTL 11 GBrowse link IED 3 26,674,018 97,524,000 RGD:61066 RGD
Q Cia12 Collagen induced arthritis QTL 12 GBrowse link IED 12 7,148,164 36,894,750 RGD:61066 RGD
Q Cia13 Collagen induced arthritis QTL 13 GBrowse link IED 4 134,858,561 171,204,531 RGD:61067 RGD
Q Cia14 Collagen induced arthritis QTL 14 GBrowse link IED 19 24,304,442 45,692,656 RGD:61066 RGD
Q Cia15 Collagen induced arthritis QTL 15 GBrowse link IED 9 2,948,882 39,821,284 RGD:61067 RGD
Q Cia16 Collagen induced arthritis QTL 16 GBrowse link IED 10 6,380,753 100,633,982 RGD:61067 RGD
Q Cia17 Collagen induced arthritis QTL 17 GBrowse link IED 18 32,458,819 73,666,623 RGD:61067 RGD
Q Cia18 Collagen induced arthritis QTL 18 GBrowse link IED X 4,384,157 49,384,157 RGD:61067 RGD
Q Cia19 Collagen induced arthritis QTL 19 GBrowse link IED X 1 88,514,313 RGD:61067 RGD
Q Cia2 Collagen induced arthritis QTL 2 GBrowse link IED 1 33,153,323 78,153,323 RGD:61062 RGD
Q Cia24 Collagen induced arthritis QTL 24 GBrowse link IED 4 149,304,432 179,854,843 RGD:61066 RGD
Q Cia27 Collagen induced arthritis QTL 27 GBrowse link IAGP 10 95,695,048 111,406,914 RGD:61063 RGD
Q Cia3 Collagen induced arthritis QTL 3 GBrowse link IED 4 104,415,843 149,415,843 RGD:61062 RGD
Q Cia4 Collagen induced arthritis QTL 4 GBrowse link IED 7 62,224,456 66,202,126 RGD:61062 RGD
Q Cia4 Collagen induced arthritis QTL 4 GBrowse link IED 7 62,224,456 66,202,126 RGD:61069 RGD
Q Cia5 Collagen induced arthritis QTL 5 GBrowse link IED 10 95,692,240 140,692,240 RGD:61062 RGD
Q Cia6 Collagen induced arthritis QTL 6 GBrowse link IED 8 86,627,869 127,907,359 RGD:61067 RGD
Q Cia7 Collagen induced arthritis QTL 7 GBrowse link IED 2 59,700,886 146,659,672 RGD:61067 RGD
Q Cia7 Collagen induced arthritis QTL 7 GBrowse link IED 2 59,700,886 146,659,672 RGD:61063 RGD
Q Cia8 Collagen induced arthritis QTL 8 IED RGD:61069 RGD
Q Cia9 Collagen induced arthritis QTL 9 IED RGD:61063 RGD
Q Ciaa1 CIA Autoantibody QTL 1 GBrowse link IED 20 2,790,511 4,530,895 RGD:61066 RGD
Q Ciaa1 CIA Autoantibody QTL 1 GBrowse link IED 20 2,790,511 4,530,895 RGD:61062 RGD
Q Ciaa2 CIA Autoantibody QTL 2 GBrowse link IED 10 64,308,668 95,695,218 RGD:61066 RGD
Q Ciaa2 CIA Autoantibody QTL 2 GBrowse link IED 10 64,308,668 95,695,218 RGD:61518 RGD
Q Ciaa4 CIA Autoantibody QTL 4 GBrowse link IED 4 128,179,957 171,204,531 RGD:61067 RGD
Q Ciaa5 CIA Autoantibody QTL 5 GBrowse link IED 5 99,080,786 149,757,440 RGD:61067 RGD
Q Pia10 Pristane induced arthritis QTL 10 GBrowse link IED 10 24,006,429 160,657,542 RGD:61519 RGD
Q Pia26 Pristane induced arthritis QTL 26 GBrowse link IAGP 10 35,131,252 76,591,208 RGD:1358860 RGD
Q Pia27 Pristane induced arthritis QTL 27 GBrowse link No_Association IAGP 11 84,560,085 85,432,136 RGD:2302026 RGD
Q Pia28 Pristane induced arthritis QTL 28 GBrowse link IAGP 4 74,123,346 119,123,346 RGD:2302026 RGD
Q Pia29 Pristane induced arthritis QTL 29 GBrowse link No_Association IAGP 16 24,934,312 69,934,312 RGD:2302026 RGD
Q Pia30 Pristane induced arthritis QTL 30 GBrowse link IAGP 3 25,222,506 70,222,506 RGD:2302026 RGD
Q Pia31 Pristane induced arthritis QTL 31 GBrowse link IAGP 17 1 26,143,121 RGD:2302026 RGD
Q Pia32 Pristane induced arthritis QTL 32 GBrowse link IAGP 4 107,728,559 152,728,559 RGD:2302026 RGD
Q Pia33 Pristane induced arthritis QTL 33 GBrowse link IAGP 5 1 40,017,184 RGD:2302026 RGD
Q Pia34 Pristane induced arthritis QTL 34 IAGP RGD:2302026 RGD
Q Pia35 Pristane induced arthritis QTL 35 IAGP RGD:2302026 RGD
Q Pia36 Pristane induced arthritis QTL 36 GBrowse link IAGP 1 41,645,883 86,645,883 RGD:2302026 RGD
Q Pia37 Pristane induced arthritis QTL 37 GBrowse link IAGP 12 14,334,630 46,782,294 RGD:2302026 RGD
Q Pia38 Pristane induced arthritis QTL 38 GBrowse link IAGP 12 568,621 45,568,621 RGD:2302026 RGD
Q Pia39 Pristane induced arthritis QTL 39 GBrowse link IAGP 14 10,539,919 55,539,919 RGD:2302026 RGD
Q Pia40 Pristane induced arthritis QTL 40 GBrowse link Induced IED 20 1,616,449 5,447,380 RGD:2306838 RGD
Q Pia41 Pristane induced arthritis QTL 41 GBrowse link IAGP 1 183,163,129 185,328,208 RGD:6892695 RGD
Q Pia42 Pristane induced arthritis QTL 42 GBrowse link Induced IED 12 20,932,559 43,863,270 RGD:1600250 RGD
Q Scwia1 Streptococcal cell wall induced arthritis QTL 1 GBrowse link IED 4 73,972,453 154,937,227 RGD:61064 RGD
S BBDR/WorN Model TAS RGD:1578691 RGD
S DA DA TAS RGD:1004 RGD
S DA.ACI-(D12Wox12-D12Rat53)/Arb GBrowse link Induced IED 12 20,932,555 43,863,270 RGD:1600250 RGD
S DA.ACI-(D2Mit12-D2Mgh29)/Nsi GBrowse link IED 2 174,730,375 227,310,008 RGD:1358860 RGD
S DA.E3-(D11Got79-D11Rat50)/Rhd GBrowse link No_Association IED 11 82,238,710 84,841,212 RGD:2302066 RGD
S DA.E3-(D11Got79-D11Wox5)/Rhd GBrowse link No_Association IED 11 82,238,710 85,432,136 RGD:2302066 RGD
S DA.E3-(D12Got46-D12Rat26)/Rhd GBrowse link Resistance IDA 12 23,362,298 23,845,733 RGD:1625013 RGD
S DA.E3-(D4Wox49-D4Got136)/Rhd GBrowse link Resistance IED 4 159,060,677 160,528,447 RGD:2324629 RGD
S DA.F344-(D10Rat24-D10Rat11)/Nsi GBrowse link Induced IED 10 69,160,380 106,310,957 RGD:1359065 RGD
S DA.F344-(D10Rat37-D10Arb9)/Nsi GBrowse link Induced TAS 10 31,931,622 79,229,233 RGD:1599708 RGD
S DA.F344-(D10Rat37-D10Wox22)/Nsi GBrowse link Induced IED 10 31,931,622 100,633,982 RGD:1359065 RGD
S DA.F344-(D20Arb2-D20Arb8)/Arb GBrowse link Induced IED 20 2,790,511 2,811,567 RGD:629569 RGD
S DA.F344-Aia1/1 GBrowse link QTM 20 2,790,511 32,560,683 RGD:625379 RGD
S DA.F344-Aia1/2 GBrowse link QTM 4 36,592,628 85,014,222 RGD:625379 RGD
S DA.F344-Aia1/3 GBrowse link QTM 4 54,879,077 54,879,214 RGD:625379 RGD
S DA.F344-Aia1/4 GBrowse link QTM 10 24,006,429 24,006,612 RGD:625379 RGD
S DA/Bkl IED RGD:61066 RGD
S DA/ZtmRhd Susceptibility IAGP RGD:2302026 RGD
S E3.DA-(D12Wox5-D12Rat26)/Rhd GBrowse link Resistance IED 12 23,845,554 23,845,733 RGD:2306838 RGD
S E3.DA-(D20Rat45-D20Rat47)/Rhd GBrowse link Induced IED 6
20		 133,455,626
1,616,332		 133,455,718
5,447,494		 RGD:2306838 RGD
S E3.DA-(D4Wox22-D4Got132)(D12Wox5-D12Rat26)/Rhd Susceptibility IED RGD:2306838 RGD
S E3/ZtmRhd Resistance IAGP RGD:2302026 RGD
S LEW.1AV1.DA-(D10Got154-D10Rat135)/Ubc GBrowse link QTM 10 101,532,360 108,776,963 RGD:62404 RGD
S LEW.1AV1.DA-(D10Rat92-D10Rat135)/Ubc GBrowse link QTM 10 78,170,416 108,776,963 RGD:61087 RGD
S LEW.1AV1.DA-(D10Rat92-D10Wox17)/Ubc GBrowse link QTM 10 78,170,416 91,168,491 RGD:62404 RGD
S LEW.1AV1.DA-(D10Wox17-D10Rat135)/Ubc GBrowse link QTM 10 91,168,332 108,776,963 RGD:62404 RGD
S LEW.1F QTM RGD:631225 RGD
S PVG.LEW-(D1Rat270-D1Rat68)/Kini GBrowse link IAGP 1 130,290,073 193,070,197 RGD:6892695 RGD
S Rhd:F344,GK-G21 No_Association IED RGD:2302066 RGD
Arthritis, Juvenile Rheumatoid term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Ccr5 chemokine (C-C motif) receptor 5 GBrowse link No_Association ISS 8 128,907,157 128,912,272 RGD:1626283 RGD
G Ccr5 chemokine (C-C motif) receptor 5 GBrowse link ISS 8 128,907,157 128,912,272 RGD:1626284 RGD
G Ciita class II, major histocompatibility complex, transactivator GBrowse link Resistance ISS 10 5,087,174 5,133,418 RGD:5491187 RGD
G Ciita class II, major histocompatibility complex, transactivator GBrowse link No_Association ISS 10 5,087,174 5,133,418 RGD:5491189 RGD
G Crp C-reactive protein, pentraxin-related GBrowse link ISS 13 88,702,243 88,703,153 RGD:6906884 RGD
G Gstt1 glutathione S-transferase theta 1 GBrowse link Susceptibility ISS 20 13,604,355 13,621,456 RGD:5490992 RGD
G Hgf hepatocyte growth factor GBrowse link ISS 4 14,864,357 14,932,513 RGD:7240710 OMIM
G Il2 interleukin 2 GBrowse link ISS 2 123,655,005 123,659,709 RGD:5147870 RGD
G Il6 interleukin 6 GBrowse link ISS 4 456,799 461,376 RGD:7240710 OMIM
G Mif macrophage migration inhibitory factor (glycosylation-inhibiting factor) GBrowse link ISS 20 13,191,986 13,192,851 RGD:7240710 OMIM
G Ptpn22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) GBrowse link ISS 2 199,083,186 199,144,309 RGD:6484550 RGD
G RT1-Ba RT1 class II, locus Ba GBrowse link ISS 20 4,697,971 4,702,564 RGD:5147815 RGD
G RT1-Ba RT1 class II, locus Ba GBrowse link ISS 20 4,697,971 4,702,564 RGD:5147863 RGD
G RT1-Bb RT1 class II, locus Bb GBrowse link ISS 20 4,730,559 4,736,201 RGD:5147863 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:5147587 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:5147863 RGD
G Selp selectin P GBrowse link Severity ISS 13 79,886,614 79,922,180 RGD:6219006 RGD
G Sh2d2a SH2 domain containing 2A GBrowse link ISS 2 179,916,108 179,924,623 RGD:2298870 RGD
G Slc11a1 solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 GBrowse link ISS 9 73,714,692 73,725,523 RGD:5684977 RGD
G Thbd thrombomodulin GBrowse link ISS 3 137,158,955 137,162,607 RGD:5685023 RGD
S DA.E3-(D20Wox3-D20Mgh4)/Rhd GBrowse link IED 20 3,660,646 6,880,472 RGD:631850 RGD
Sjogren's Syndrome term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Cast calpastatin GBrowse link ISS 2 1,495,048 1,608,477 RGD:5683622 RGD
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 GBrowse link ISS 8 61,462,207 61,468,237 RGD:5147747 RGD
G Gdnf glial cell derived neurotrophic factor GBrowse link ISS 2 57,399,312 57,424,030 RGD:6218983 RGD
G Il10 interleukin 10 GBrowse link ISS 13 43,953,900 43,957,766 RGD:1580479 RGD
G RT1-Ba RT1 class II, locus Ba GBrowse link ISS 20 4,697,971 4,702,564 RGD:5147809 RGD
G RT1-Bb RT1 class II, locus Bb GBrowse link ISS 20 4,730,559 4,736,201 RGD:5147630 RGD
G RT1-Db1 RT1 class II, locus Db1 GBrowse link ISS 20 4,671,489 4,681,058 RGD:5147809 RGD
G Selp selectin P GBrowse link ISS 13 79,886,614 79,922,180 RGD:6478702 RGD
G Vim vimentin GBrowse link ISS 17 87,847,280 87,855,763 RGD:6480477 RGD
G Vip vasoactive intestinal peptide GBrowse link ISS 1 36,361,513 36,369,594 RGD:5685375 RGD
Sjögren-Mikulicz syndrome term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Gstm1 glutathione S-transferase mu 1 GBrowse link Susceptibility ISS 2 203,575,444 203,580,821 RGD:5491001 RGD
Term paths to the root
Path 1
Term Annotations click to browse term
  Diseases 30477
    Musculoskeletal Diseases 1854
      Rheumatic Diseases 336
        Arthritis, Rheumatoid 263
          Arthritis, Juvenile Rheumatoid + 21
          Caplan Syndrome 0
          Felty Syndrome 0
          Palindromic rheumatism 0
          Rheumatoid Nodule 0
          Rheumatoid Vasculitis 0
          Sjogren's Syndrome + 10
          Sjögren-Mikulicz syndrome 1
          Still's Disease, Adult-Onset 0
Path 2
Term Annotations click to browse term
  Diseases 30477
    Musculoskeletal Diseases 1854
      Joint Diseases 661
        Arthritis 603
          Arthritis, Rheumatoid 263
            Arthritis, Juvenile Rheumatoid + 21
            Caplan Syndrome 0
            Felty Syndrome 0
            Palindromic rheumatism 0
            Rheumatoid Nodule 0
            Rheumatoid Vasculitis 0
            Sjogren's Syndrome + 10
            Sjögren-Mikulicz syndrome 1
            Still's Disease, Adult-Onset 0
paths to the root

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