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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:phytanic acid degradation pathway
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Accession:PW:0002564 term browser browse the term
Definition:Those metabolic reactions involved in the oxidation of phytanic acid, a branched chain fatty acid. Phytanic acid alpha-oxidation in the peroxisome results in pristanic acid, which can then follow a beta degradation pathway.
Synonyms:related_synonym: SMP:00450


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phytanic acid degradation pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcd1 ATP binding cassette subfamily D member 1 ISO SMPDB SMP:00450 NCBI chr  X:151,428,334...151,450,115
Ensembl chr  X:151,428,578...151,450,115 		JBrowse link
G Abcd2 ATP binding cassette subfamily D member 2 ISO SMPDB SMP:00450 NCBI chr 7:122,263,034...122,311,642
Ensembl chr 7:122,263,032...122,311,642 		JBrowse link
G Aldh3a2 aldehyde dehydrogenase 3 family, member A2 ISO SMPDB SMP:00450 NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281 		JBrowse link
G Hacl1 2-hydroxyacyl-CoA lyase 1 ISO SMPDB SMP:00450 NCBI chr16:6,826,881...6,863,027
Ensembl chr16:6,824,906...6,863,027 		JBrowse link
G Phyh phytanoyl-CoA 2-hydroxylase ISO SMPDB SMP:00450 NCBI chr17:73,329,461...73,346,359
Ensembl chr17:73,329,082...73,346,409 		JBrowse link
G Slc27a2 solute carrier family 27 member 2 ISO SMPDB SMP:00450 NCBI chr 3:113,804,728...113,842,208
Ensembl chr 3:113,804,728...113,842,208 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    classic metabolic pathway 1854
      lipid metabolic pathway 488
        fatty acid metabolic pathway 191
          fatty acid degradation pathway 42
            fatty acid alpha degradation pathway 6
              phytanic acid degradation pathway 6
paths to the root