PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: NXF1-NXT1 export pathway
Accession: PW:0001625
browse the term
Definition: The NXF1-NXT export pathway is involved in the trafficking of bulk mRNA. It is dependent upon the TREX/THO complex for receptor recruitment to the cargo.
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Alyref
Aly/REF export factor
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069
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Ddx19b
DEAD-box helicase 19B
ISO
RGD
PMID:23583578
RGD:9743967
NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259
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Ddx39b
DExD-box helicase 39B
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996
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Gle1
GLE1 RNA export mediator
ISO
RGD
PMID:23583578
RGD:9743967
NCBI chr 3:13,209,312...13,237,018
Ensembl chr 3:13,209,322...13,237,379
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Nup214
nucleoporin 214
ISO
RGD
PMID:23583578
RGD:9743967
NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568
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Nxf1
nuclear RNA export factor 1
ISO
RGD
PMID:23583578
RGD:9743967
NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636
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Nxt1
nuclear transport factor 2-like export factor 1
ISO
RGD
PMID:23583578
RGD:9743967
NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907
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Sarnp
SAP domain containing ribonucleoprotein
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr 7:1,251,096...1,305,335
Ensembl chr 7:1,251,098...1,305,332
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Thoc1
THO complex subunit 1
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr18:983,824...1,019,123
Ensembl chr18:983,824...1,019,114
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Thoc2
THO complex subunit 2
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr X:120,634,966...120,749,569
Ensembl chr X:120,634,968...120,749,513
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Thoc5
THO complex subunit 5
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718
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Thoc6
THO complex subunit 6
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr10:12,700,051...12,705,411
Ensembl chr10:12,700,051...12,706,925
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Thoc7
THO complex subunit 7
ISO
RGD
PMID:22178508
RGD:9743960
NCBI chr15:11,262,362...11,277,200
Ensembl chr15:11,262,613...11,277,193
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all