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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:RNA transport pathway
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Accession:PW:0001160 term browser browse the term
Definition:The pathway whereby various RNA molecules synthesized in the nucleus are exported to the cytoplasm to be further processed such as protein-coding mRNA or to fulfill particular functions.
Synonyms:related_synonym: RNA transport


show annotations for term's descendants           Sort by:
RNA transport pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700009N14Rikl RIKEN cDNA 1700009N14 gene like IEA KEGG rno:03013 NCBI chr 5:54,456,005...54,457,381
Ensembl chr 5:54,455,893...54,457,677 		JBrowse link
G Aaas aladin WD repeat nucleoporin IEA KEGG rno:03013 NCBI chr 7:133,464,315...133,483,961
Ensembl chr 7:133,464,315...133,483,961 		JBrowse link
G Acin1 apoptotic chromatin condensation inducer 1 IEA KEGG rno:03013 NCBI chr15:28,102,112...28,147,001
Ensembl chr15:28,102,112...28,147,001 		JBrowse link
G Alyref Aly/REF export factor IEA KEGG rno:03013 NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069 		JBrowse link
G Casc3 CASC3 exon junction complex subunit IEA KEGG rno:03013 NCBI chr10:83,769,014...83,788,966
Ensembl chr10:83,769,001...83,788,966 		JBrowse link
G Clns1a chloride nucleotide-sensitive channel 1A IEA KEGG rno:03013 NCBI chr 1:152,019,369...152,039,670
Ensembl chr 1:152,019,378...152,039,661 		JBrowse link
G Ddx20 DEAD-box helicase 20 IEA KEGG rno:03013 NCBI chr 2:193,158,761...193,168,484
Ensembl chr 2:193,158,823...193,166,774 		JBrowse link
G Eef1a1 eukaryotic translation elongation factor 1 alpha 1 IEA KEGG rno:03013 NCBI chr 8:79,341,554...79,344,784
Ensembl chr 8:79,341,557...79,344,839 		JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 IEA KEGG rno:03013 NCBI chr 3:168,265,893...168,275,071
Ensembl chr 3:168,195,357...168,275,071 		JBrowse link
G Eif1 eukaryotic translation initiation factor 1 IEA KEGG rno:03013 NCBI chr10:85,246,751...85,248,842
Ensembl chr10:85,246,764...85,427,327 		JBrowse link
G Eif1b eukaryotic translation initiation factor 1B IEA KEGG rno:03013 NCBI chr 8:120,203,561...120,206,176
Ensembl chr 8:120,203,451...120,206,176 		JBrowse link
G Eif2b1 eukaryotic translation initiation factor 2B subunit alpha IEA KEGG rno:03013 NCBI chr12:32,025,593...32,033,848
Ensembl chr12:32,025,557...32,046,601 		JBrowse link
G Eif2b2 eukaryotic translation initiation factor 2B subunit beta IEA KEGG rno:03013 NCBI chr 6:104,866,926...104,873,351
Ensembl chr 6:104,866,753...104,873,353 		JBrowse link
G Eif2b3 eukaryotic translation initiation factor 2B subunit gamma IEA KEGG rno:03013 NCBI chr 5:130,492,167...130,558,692
Ensembl chr 5:130,492,220...130,563,332 		JBrowse link
G Eif2b4 eukaryotic translation initiation factor 2B subunit delta IEA KEGG rno:03013 NCBI chr 6:25,183,177...25,188,832
Ensembl chr 6:25,183,186...25,188,829 		JBrowse link
G Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon IEA KEGG rno:03013 NCBI chr11:80,394,433...80,404,468
Ensembl chr11:80,394,433...80,404,419 		JBrowse link
G Eif2s1 eukaryotic translation initiation factor 2 subunit alpha IEA KEGG rno:03013 NCBI chr 6:97,672,829...97,697,499
Ensembl chr 6:97,672,766...97,706,225 		JBrowse link
G Eif2s2 eukaryotic translation initiation factor 2 subunit beta IEA KEGG rno:03013 NCBI chr 3:143,374,652...143,395,460
Ensembl chr 3:143,373,686...143,395,432 		JBrowse link
G Eif3a eukaryotic translation initiation factor 3, subunit A IEA KEGG rno:03013 NCBI chr 1:259,902,767...259,932,976
Ensembl chr 1:259,902,680...259,932,976 		JBrowse link
G Eif3b eukaryotic translation initiation factor 3, subunit B IEA KEGG rno:03013 NCBI chr12:14,196,403...14,220,865
Ensembl chr12:14,196,403...14,220,886 		JBrowse link
G Eif3c eukaryotic translation initiation factor 3, subunit C IEA KEGG rno:03013 NCBI chr 1:181,134,604...181,152,489
Ensembl chr 1:181,134,604...181,152,493 		JBrowse link
G Eif3d eukaryotic translation initiation factor 3, subunit D IEA KEGG rno:03013 NCBI chr 7:109,539,795...109,552,184
Ensembl chr 7:109,539,356...109,552,206 		JBrowse link
G Eif3e eukaryotic translation initiation factor 3 subunit E IEA KEGG rno:03013 NCBI chr 7:74,339,848...74,372,483
Ensembl chr 7:74,339,828...74,373,096 		JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F IEA KEGG rno:03013 NCBI chr 1:162,934,220...162,943,204
Ensembl chr 1:162,934,212...162,943,204 		JBrowse link
G Eif3g eukaryotic translation initiation factor 3, subunit G IEA KEGG rno:03013 NCBI chr 8:19,429,728...19,433,760
Ensembl chr 8:19,429,643...19,433,808 		JBrowse link
G Eif3h eukaryotic translation initiation factor 3, subunit H IEA KEGG rno:03013 NCBI chr 7:83,091,037...83,174,451
Ensembl chr 7:83,091,039...83,174,451 		JBrowse link
G Eif3i eukaryotic translation initiation factor 3, subunit I IEA KEGG rno:03013 NCBI chr 5:141,935,135...141,942,589
Ensembl chr 5:141,935,044...141,942,676 		JBrowse link
G Eif3j eukaryotic translation initiation factor 3, subunit J IEA KEGG rno:03013 NCBI chr 3:108,985,103...109,007,341
Ensembl chr 3:108,985,118...109,007,953 		JBrowse link
G Eif4a1 eukaryotic translation initiation factor 4A1 IEA KEGG rno:03013 NCBI chr10:54,384,345...54,389,855
Ensembl chr10:54,384,347...54,389,858 		JBrowse link
G Eif4a2 eukaryotic translation initiation factor 4A2 IEA KEGG rno:03013 NCBI chr11:77,764,126...77,770,810
Ensembl chr11:77,764,124...77,770,781 		JBrowse link
G Eif4a3 eukaryotic translation initiation factor 4A3 IEA KEGG rno:03013 NCBI chr10:104,549,038...104,559,032
Ensembl chr10:104,549,038...104,559,057 		JBrowse link
G Eif4b eukaryotic translation initiation factor 4B IEA KEGG rno:03013 NCBI chr 7:133,206,637...133,228,436 JBrowse link
G Eif4e eukaryotic translation initiation factor 4E IEA KEGG rno:03013 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683 		JBrowse link
G Eif4e2 eukaryotic translation initiation factor 4E family member 2 IEA KEGG rno:03013 NCBI chr 9:87,886,126...87,914,470
Ensembl chr 9:87,878,085...87,914,482 		JBrowse link
G Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 IEA KEGG rno:03013 NCBI chr16:64,792,595...64,805,984
Ensembl chr16:64,790,226...64,805,984 		JBrowse link
G Eif4g1 eukaryotic translation initiation factor 4 gamma 1 IEA KEGG rno:03013 NCBI chr11:80,221,919...80,241,958
Ensembl chr11:80,221,919...80,241,941 		JBrowse link
G Eif4g2 eukaryotic translation initiation factor 4, gamma 2 IEA KEGG rno:03013 NCBI chr 1:165,181,433...165,193,583
Ensembl chr 1:165,181,434...165,193,588 		JBrowse link
G Eif4g3 eukaryotic translation initiation factor 4 gamma, 3 IEA KEGG rno:03013 NCBI chr 5:150,197,410...150,418,862
Ensembl chr 5:150,195,226...150,418,363 		JBrowse link
G Eif5 eukaryotic translation initiation factor 5 IEA KEGG rno:03013 NCBI chr 6:130,589,162...130,597,656
Ensembl chr 6:130,589,143...130,597,656 		JBrowse link
G Eif5b eukaryotic translation initiation factor 5B IEA KEGG rno:03013 NCBI chr 9:40,222,769...40,277,482
Ensembl chr 9:40,222,898...40,277,482 		JBrowse link
G Elac1 elaC ribonuclease Z 1 IEA KEGG rno:03013 NCBI chr18:67,321,231...67,341,358
Ensembl chr18:67,323,583...67,340,936 		JBrowse link
G Elac2 elaC ribonuclease Z 2 IEA KEGG rno:03013 NCBI chr10:49,632,308...49,655,614
Ensembl chr10:49,632,378...49,655,614 		JBrowse link
G Gemin4 gem (nuclear organelle) associated protein 4 IEA KEGG rno:03013 NCBI chr10:61,062,420...61,073,529
Ensembl chr10:61,066,425...61,073,431
Ensembl chr10:61,066,425...61,073,431 		JBrowse link
G Gemin5 gem (nuclear organelle) associated protein 5 IEA KEGG rno:03013 NCBI chr10:42,295,729...42,342,902
Ensembl chr10:42,297,515...42,342,892 		JBrowse link
G Gemin6 gem (nuclear organelle) associated protein 6 IEA KEGG rno:03013 NCBI chr 6:14,786,090...14,790,617
Ensembl chr 6:14,786,070...14,790,612 		JBrowse link
G Gemin7 gem (nuclear organelle) associated protein 7 IEA KEGG rno:03013 NCBI chr 1:79,215,054...79,228,769
Ensembl chr 1:79,214,919...79,224,994 		JBrowse link
G Gemin8 gem (nuclear organelle) associated protein 8 IEA KEGG rno:03013 NCBI chr  X:28,259,806...28,278,641
Ensembl chr  X:28,259,793...28,278,663 		JBrowse link
G Kpnb1 karyopherin subunit beta 1 IEA KEGG rno:03013 NCBI chr10:82,145,662...82,174,437
Ensembl chr10:82,145,420...82,174,605 		JBrowse link
G Magoh mago homolog, exon junction complex subunit IEA KEGG rno:03013 NCBI chr 5:122,639,268...122,646,650
Ensembl chr 5:122,639,308...122,646,617 		JBrowse link
G Magohb mago homolog B, exon junction complex subunit IEA KEGG rno:03013 NCBI chr 4:165,034,131...165,041,977
Ensembl chr 4:165,034,122...165,041,967 		JBrowse link
G Ncbp1 nuclear cap binding protein subunit 1 IEA KEGG rno:03013 NCBI chr 5:60,416,023...60,449,004
Ensembl chr 5:60,415,982...60,449,089 		JBrowse link
G Ndc1 NDC1 transmembrane nucleoporin IEA KEGG rno:03013 NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291 		JBrowse link
G Nmd3 NMD3 ribosome export adaptor IEA KEGG rno:03013 NCBI chr 2:154,012,973...154,038,466
Ensembl chr 2:154,013,020...154,039,259 		JBrowse link
G Nup107 nucleoporin 107 IEA KEGG rno:03013 NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370 		JBrowse link
G Nup133 nucleoporin 133 IEA KEGG rno:03013 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Nup153 nucleoporin 153 IEA KEGG rno:03013 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup155 nucleoporin 155 IEA KEGG rno:03013 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148 		JBrowse link
G Nup160 nucleoporin 160 IEA KEGG rno:03013 NCBI chr 3:76,665,786...76,729,296
Ensembl chr 3:76,665,786...76,724,565 		JBrowse link
G Nup188 nucleoporin 188 IEA KEGG rno:03013 NCBI chr 3:13,559,917...13,616,313
Ensembl chr 3:13,559,990...13,616,307 		JBrowse link
G Nup205 nucleoporin 205 IEA KEGG rno:03013 NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844 		JBrowse link
G Nup210 nucleoporin 210 IEA KEGG rno:03013 NCBI chr 4:123,511,558...123,609,874
Ensembl chr 4:123,511,559...123,609,874 		JBrowse link
G Nup210l nucleoporin 210-like IEA KEGG rno:03013 NCBI chr 2:175,545,999...175,665,332
Ensembl chr 2:175,547,988...175,665,332 		JBrowse link
G Nup214 nucleoporin 214 IEA KEGG rno:03013 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nup35 nucleoporin 35 IEA KEGG rno:03013 NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130 		JBrowse link
G Nup37 nucleoporin 37 IEA KEGG rno:03013 NCBI chr 7:22,556,544...22,609,622
Ensembl chr 7:22,573,764...22,609,616 		JBrowse link
G Nup42 nucleoporin 42 IEA KEGG rno:03013 NCBI chr 4:10,985,554...11,002,591
Ensembl chr 4:10,985,554...11,002,591 		JBrowse link
G Nup43 nucleoporin 43 IEA KEGG rno:03013 NCBI chr 1:2,144,427...2,157,887
Ensembl chr 1:2,148,043...2,158,186 		JBrowse link
G Nup50 nucleoporin 50 IEA KEGG rno:03013 NCBI chr 7:116,047,960...116,065,231
Ensembl chr 7:116,048,021...116,066,905 		JBrowse link
G Nup54 nucleoporin 54 IEA KEGG rno:03013 NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028 		JBrowse link
G Nup58 nucleoporin 58 IEA KEGG rno:03013 NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060 		JBrowse link
G Nup62 nucleoporin 62 IEA KEGG rno:03013 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Nup85 nucleoporin 85 IEA KEGG rno:03013 NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043 		JBrowse link
G Nup88 nucleoporin 88 IEA KEGG rno:03013 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257 		JBrowse link
G Nup93 nucleoporin 93 IEA KEGG rno:03013 NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor IEA KEGG rno:03013 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Nxf1 nuclear RNA export factor 1 IEA KEGG rno:03013 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636 		JBrowse link
G Nxf3 nuclear RNA export factor 3 IEA KEGG rno:03013 NCBI chr  X:99,025,901...99,050,409
Ensembl chr  X:99,025,901...99,039,261 		JBrowse link
G Nxf7 nuclear RNA export factor 7 IEA KEGG rno:03013 NCBI chr  X:98,535,374...98,552,562
Ensembl chr  X:98,535,375...98,552,526 		JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 IEA KEGG rno:03013 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907 		JBrowse link
G Nxt2 nuclear transport factor 2-like export factor 2 IEA KEGG rno:03013 NCBI chr  X:105,855,616...105,862,902
Ensembl chr  X:105,855,608...105,862,899 		JBrowse link
G Pabpc1 poly(A) binding protein, cytoplasmic 1 IEA KEGG rno:03013 NCBI chr 7:67,777,438...67,789,731
Ensembl chr 7:67,777,381...67,789,744 		JBrowse link
G Pabpc1l poly(A) binding protein, cytoplasmic 1-like IEA KEGG rno:03013 NCBI chr 3:152,692,825...152,725,997
Ensembl chr 3:152,693,700...152,725,997 		JBrowse link
G Pabpc1l2a poly(A) binding protein, cytoplasmic 1-like 2A IEA KEGG rno:03013 NCBI chr  X:68,023,845...68,026,508 JBrowse link
G Pabpc2 poly(A) binding protein, cytoplasmic 2 IEA KEGG rno:03013 NCBI chr18:31,654,218...31,656,486
Ensembl chr18:31,654,218...31,656,286 		JBrowse link
G Pabpc4 poly(A) binding protein, cytoplasmic 4 IEA KEGG rno:03013 NCBI chr 5:135,563,142...135,578,985
Ensembl chr 5:135,563,562...135,578,979 		JBrowse link
G Pabpc4l poly(A) binding protein, cytoplasmic 4-like IEA KEGG rno:03013 NCBI chr 2:129,807,755...129,809,745
Ensembl chr 2:129,807,755...129,809,745 		JBrowse link
G Pabpc5 poly A binding protein, cytoplasmic 5 IEA KEGG rno:03013 NCBI chr  X:85,637,763...85,641,235
Ensembl chr  X:85,638,574...85,639,722 		JBrowse link
G Paip1 poly(A) binding protein interacting protein 1 IEA KEGG rno:03013 NCBI chr 2:51,523,190...51,550,241
Ensembl chr 2:51,522,921...51,550,241 		JBrowse link
G Phax phosphorylated adaptor for RNA export IEA KEGG rno:03013 NCBI chr18:50,053,133...50,069,823
Ensembl chr18:50,053,023...50,069,823 		JBrowse link
G Pigz phosphatidylinositol glycan anchor biosynthesis, class Z IEA KEGG rno:03013 NCBI chr11:68,831,847...68,851,798 JBrowse link
G Pnn pinin, desmosome associated protein IEA KEGG rno:03013 NCBI chr 6:76,758,138...76,766,451
Ensembl chr 6:76,758,117...76,766,889 		JBrowse link
G Pom121 POM121 transmembrane nucleoporin IEA KEGG rno:03013 NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294 		JBrowse link
G Pom121l2 POM121 transmembrane nucleoporin-like 2 IEA KEGG rno:03013 NCBI chr17:42,546,144...42,553,447
Ensembl chr17:42,546,326...42,553,423 		JBrowse link
G Pop1 POP1 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03013 NCBI chr 7:65,705,348...65,733,143
Ensembl chr 7:65,705,368...65,733,141 		JBrowse link
G Pop4 POP4 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03013 NCBI chr 1:90,960,026...90,968,360
Ensembl chr 1:90,960,022...90,968,443 		JBrowse link
G Pop5 POP5 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03013 NCBI chr12:41,376,755...41,384,882
Ensembl chr12:41,376,755...41,381,336 		JBrowse link
G Pop7 POP7 homolog, ribonuclease P/MRP subunit IEA KEGG rno:03013 NCBI chr12:19,189,384...19,190,425
Ensembl chr12:19,189,138...19,190,674 		JBrowse link
G Prmt5 protein arginine methyltransferase 5 IEA KEGG rno:03013 NCBI chr15:27,968,893...27,978,291
Ensembl chr15:27,968,910...27,978,296 		JBrowse link
G Pym1 PYM homolog 1, exon junction complex associated factor IEA KEGG rno:03013 NCBI chr 7:1,177,746...1,200,899
Ensembl chr 7:1,178,008...1,198,937 		JBrowse link
G Rae1 ribonucleic acid export 1 IEA KEGG rno:03013 NCBI chr 3:161,779,096...161,794,048
Ensembl chr 3:161,779,088...161,794,038 		JBrowse link
G Ran RAN, member RAS oncogene family IEA KEGG rno:03013 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276 		JBrowse link
G Ranbp2 RAN binding protein 2 IEA KEGG rno:03013 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 IEA KEGG rno:03013 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438 		JBrowse link
G Rasl2-9 RAS-like, family 2, locus 9 IEA KEGG rno:03013 NCBI chr 1:68,720,879...68,734,930
Ensembl chr 1:68,720,879...68,722,057 		JBrowse link
G Rbm8a RNA binding motif protein 8A IEA KEGG rno:03013 NCBI chr 2:184,165,189...184,167,959
Ensembl chr 2:184,165,193...184,167,959 		JBrowse link
G Rnps1 RNA binding protein with serine rich domain 1 IEA KEGG rno:03013 NCBI chr10:13,445,516...13,455,858
Ensembl chr10:13,445,653...13,455,858 		JBrowse link
G Rpp14 ribonuclease P/MRP subunit p14 IEA KEGG rno:03013 NCBI chr15:16,837,796...16,847,970
Ensembl chr15:16,836,859...16,852,101
Ensembl chr15:16,836,859...16,852,101 		JBrowse link
G Rpp21 ribonuclease P/MRP subunit p21 IEA KEGG rno:03013 NCBI chr20:2,018,170...2,020,100
Ensembl chr20:2,018,147...2,020,106 		JBrowse link
G Rpp25 ribonuclease P and MRP subunit p25 IEA KEGG rno:03013 NCBI chr 8:57,907,352...57,908,732
Ensembl chr 8:57,907,352...57,908,732 		JBrowse link
G Rpp30 ribonuclease P/MRP subunit p30 IEA KEGG rno:03013 NCBI chr 1:233,786,048...233,808,958
Ensembl chr 1:233,786,099...233,808,952 		JBrowse link
G Rpp38 ribonuclease P/MRP subunit p38 IEA KEGG rno:03013 NCBI chr17:74,914,066...74,917,742
Ensembl chr17:74,908,932...74,927,431 		JBrowse link
G Rpp40 ribonuclease P/MRP subunit p40 IEA KEGG rno:03013 NCBI chr17:28,947,752...28,956,788
Ensembl chr17:28,947,734...28,956,788 		JBrowse link
G Sap18 Sin3A associated protein 18 IEA KEGG rno:03013 NCBI chr15:31,943,228...31,947,534
Ensembl chr15:31,943,230...31,950,038
Ensembl chr10:31,943,230...31,950,038 		JBrowse link
G Sap18-ps1 Sin3A associated protein 18, pseudogene 1 IEA KEGG rno:03013 NCBI chr10:86,657,350...86,657,976
Ensembl chr10:86,657,353...86,657,975 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component IEA KEGG rno:03013 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Senp17 Sumo1/sentrin/SMT3 specific peptidase 17 IEA KEGG rno:03013 NCBI chr 4:161,126,901...161,128,328
Ensembl chr 4:161,126,901...161,128,328 		JBrowse link
G Senp18 Sumo1/sentrin/SMT3 specific peptidase 18 IEA KEGG rno:03013 NCBI chr 4:161,066,262...161,067,689
Ensembl chr 4:161,065,389...161,067,875 		JBrowse link
G Senp2 SUMO specific peptidase 2 IEA KEGG rno:03013 NCBI chr11:78,981,429...79,018,274
Ensembl chr11:78,981,432...79,018,238 		JBrowse link
G Smn1 survival of motor neuron 1, telomeric IEA KEGG rno:03013 NCBI chr 2:31,490,018...31,501,065
Ensembl chr 2:31,490,015...31,501,060 		JBrowse link
G Snupn snurportin 1 IEA KEGG rno:03013 NCBI chr 8:57,347,412...57,388,345
Ensembl chr 8:57,348,130...57,380,912 		JBrowse link
G Srrm1 serine and arginine repetitive matrix 1 IEA KEGG rno:03013 NCBI chr 5:147,559,515...147,591,895
Ensembl chr 5:147,559,514...147,591,849 		JBrowse link
G Strap serine/threonine kinase receptor associated protein IEA KEGG rno:03013 NCBI chr 4:170,646,042...170,660,291
Ensembl chr 4:170,646,001...170,660,828 		JBrowse link
G Sumo1 small ubiquitin-like modifier 1 IEA KEGG rno:03013 NCBI chr 9:61,078,790...61,108,697
Ensembl chr 9:61,077,435...61,108,761 		JBrowse link
G Sumo2 small ubiquitin-like modifier 2 IEA KEGG rno:03013 NCBI chr10:100,771,941...100,784,503
Ensembl chr10:100,686,797...100,784,513 		JBrowse link
G Sumo3 small ubiquitin-like modifier 3 IEA KEGG rno:03013 NCBI chr20:11,010,140...11,020,850
Ensembl chr20:11,007,148...11,020,877
Ensembl chr20:11,007,148...11,020,877 		JBrowse link
G Tacc3 transforming, acidic coiled-coil containing protein 3 IEA KEGG rno:03013 NCBI chr14:77,051,209...77,065,343
Ensembl chr14:77,051,215...77,065,219 		JBrowse link
G Tgs1 trimethylguanosine synthase 1 IEA KEGG rno:03013 NCBI chr 5:16,524,864...16,558,399
Ensembl chr 5:16,524,874...16,558,399 		JBrowse link
G Thoc1 THO complex subunit 1 IEA KEGG rno:03013 NCBI chr18:983,824...1,019,123
Ensembl chr18:983,824...1,019,114 		JBrowse link
G Thoc2 THO complex subunit 2 IEA KEGG rno:03013 NCBI chr  X:120,634,966...120,749,569
Ensembl chr  X:120,634,968...120,749,513 		JBrowse link
G Thoc3 THO complex subunit 3 IEA KEGG rno:03013 NCBI chr17:10,143,184...10,152,375
Ensembl chr17:10,143,139...10,152,370 		JBrowse link
G Thoc5 THO complex subunit 5 IEA KEGG rno:03013 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718 		JBrowse link
G Thoc6 THO complex subunit 6 IEA KEGG rno:03013 NCBI chr10:12,700,051...12,705,411
Ensembl chr10:12,700,051...12,706,925 		JBrowse link
G Thoc7 THO complex subunit 7 IEA KEGG rno:03013 NCBI chr15:11,262,362...11,277,200
Ensembl chr15:11,262,613...11,277,193 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein IEA KEGG rno:03013 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
G Trnt1 tRNA nucleotidyl transferase 1 IEA KEGG rno:03013 NCBI chr 4:139,681,115...139,703,611
Ensembl chr 4:139,680,858...139,703,611 		JBrowse link
G Ube2i ubiquitin-conjugating enzyme E2I IEA KEGG rno:03013 NCBI chr10:14,277,749...14,294,681
Ensembl chr10:69,701,618...69,702,443
Ensembl chr10:69,701,618...69,702,443 		JBrowse link
G Upf2 UPF2, regulator of nonsense mediated mRNA decay IEA KEGG rno:03013 NCBI chr17:72,224,575...72,335,896
Ensembl chr17:72,225,316...72,335,855 		JBrowse link
G Upf3a UPF3A, regulator of nonsense mediated mRNA decay IEA KEGG rno:03013 NCBI chr16:75,757,442...75,768,478
Ensembl chr16:75,757,441...75,769,345 		JBrowse link
G Upf3b UPF3B, regulator of nonsense mediated mRNA decay IEA KEGG rno:03013 NCBI chr  X:116,335,308...116,353,332
Ensembl chr  X:116,335,308...116,353,236 		JBrowse link
G Xpo1 exportin 1 IEA KEGG rno:03013 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498 		JBrowse link
G Xpo5 exportin 5 IEA KEGG rno:03013 NCBI chr 9:14,740,182...14,778,171
Ensembl chr 9:14,740,182...14,778,171 		JBrowse link
G Xpot exportin for tRNA IEA KEGG rno:03013 NCBI chr 7:57,111,536...57,152,013
Ensembl chr 7:57,111,536...57,152,099 		JBrowse link
CRM1 export pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anp32a acidic nuclear phosphoprotein 32 family member A ISO RGD PMID:23583578 RGD:9743967 NCBI chr 8:62,829,099...62,865,443
Ensembl chr 8:62,827,456...62,865,443 		JBrowse link
G Anp32b acidic nuclear phosphoprotein 32 family member B ISO RGD PMID:23583578 RGD:9743967 NCBI chr 5:60,743,077...60,765,726
Ensembl chr 5:60,743,443...60,765,717 		JBrowse link
G Eif4e eukaryotic translation initiation factor 4E ISO RGD PMID:23583578 RGD:9743967 NCBI chr 2:227,066,519...227,099,261
Ensembl chr 2:227,066,673...227,098,683 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr12:2,640,936...2,684,787
Ensembl chr12:2,645,061...2,684,784 		JBrowse link
G Lrpprc leucine-rich pentatricopeptide repeat containing ISO RGD PMID:23583578 RGD:9743967 NCBI chr 6:9,859,816...9,942,294
Ensembl chr 6:9,859,867...9,942,293 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO RGD PMID:23583578 RGD:9743967 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Nxf3 nuclear RNA export factor 3 ISO RGD PMID:23583578 RGD:9743967 NCBI chr  X:99,025,901...99,050,409
Ensembl chr  X:99,025,901...99,039,261 		JBrowse link
G Ran RAN, member RAS oncogene family ISO RGD PMID:23583578 RGD:9743967 NCBI chr12:27,674,049...27,678,598
Ensembl chr12:27,674,050...27,678,276 		JBrowse link
G Ranbp1 RAN binding protein 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr11:82,742,603...82,750,836
Ensembl chr11:82,742,600...82,750,838 		JBrowse link
G Ranbp2 RAN binding protein 2 ISO RGD PMID:23583578 RGD:9743967 NCBI chr20:26,442,156...26,493,481
Ensembl chr20:26,442,217...26,493,481 		JBrowse link
G Rangap1 RAN GTPase activating protein 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 7:113,224,695...113,250,441
Ensembl chr 7:113,224,703...113,250,438 		JBrowse link
G Xpo1 exportin 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr14:97,233,282...97,275,536
Ensembl chr14:97,233,270...97,275,498 		JBrowse link
mRNA nuclear export pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nup107 nucleoporin 107 ISO RGD PMID:25184662 RGD:9743947 NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370 		JBrowse link
G Nup133 nucleoporin 133 ISO RGD PMID:25184662 RGD:9743947 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Nup153 nucleoporin 153 ISO RGD PMID:25184662 RGD:9743947 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup160 nucleoporin 160 ISO RGD PMID:25184662 RGD:9743947 NCBI chr 3:76,665,786...76,729,296
Ensembl chr 3:76,665,786...76,724,565 		JBrowse link
G Nup214 nucleoporin 214 ISO RGD PMID:25184662 RGD:9743947 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nup37 nucleoporin 37 ISO RGD PMID:25184662 RGD:9743947 NCBI chr 7:22,556,544...22,609,622
Ensembl chr 7:22,573,764...22,609,616 		JBrowse link
G Nup43 nucleoporin 43 ISO RGD PMID:25184662 RGD:9743947 NCBI chr 1:2,144,427...2,157,887
Ensembl chr 1:2,148,043...2,158,186 		JBrowse link
G Nup54 nucleoporin 54 ISO RGD PMID:25184662 RGD:9743947 NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028 		JBrowse link
G Nup58 nucleoporin 58 ISO RGD PMID:25184662 RGD:9743947 NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060 		JBrowse link
G Nup62 nucleoporin 62 ISO RGD PMID:25184662 RGD:9743947 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Nup85 nucleoporin 85 ISO RGD PMID:25184662 RGD:9743947 NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor ISO RGD PMID:25184662 RGD:9743947 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Sec13 SEC13 homolog, nuclear pore and COPII coat complex component ISO RGD PMID:25184662 RGD:9743947 NCBI chr 4:146,877,739...146,891,130
Ensembl chr 4:146,875,524...146,891,173 		JBrowse link
G Seh1l SEH1-like nucleoporin ISO RGD PMID:25184662 RGD:9743947 NCBI chr18:61,346,986...61,369,987 JBrowse link
NXF1-NXT1 export pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Alyref Aly/REF export factor ISO RGD PMID:22178508 RGD:9743960 NCBI chr10:105,871,424...105,875,076
Ensembl chr10:105,871,306...105,875,069 		JBrowse link
G Ddx19b DEAD-box helicase 19B ISO RGD PMID:23583578 RGD:9743967 NCBI chr19:38,968,215...38,998,907
Ensembl chr19:38,968,215...38,997,259 		JBrowse link
G Ddx39b DExD-box helicase 39B ISO RGD PMID:22178508 RGD:9743960 NCBI chr20:3,547,702...3,585,064
Ensembl chr20:3,572,056...3,584,996 		JBrowse link
G Gle1 GLE1 RNA export mediator ISO RGD PMID:23583578 RGD:9743967 NCBI chr 3:13,209,312...13,237,018
Ensembl chr 3:13,209,322...13,237,379 		JBrowse link
G Nup214 nucleoporin 214 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nxf1 nuclear RNA export factor 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 1:205,655,442...205,668,637
Ensembl chr 1:205,655,375...205,668,636 		JBrowse link
G Nxt1 nuclear transport factor 2-like export factor 1 ISO RGD PMID:23583578 RGD:9743967 NCBI chr 3:136,108,975...136,111,897
Ensembl chr 3:136,108,862...136,111,907 		JBrowse link
G Sarnp SAP domain containing ribonucleoprotein ISO RGD PMID:22178508 RGD:9743960 NCBI chr 7:1,251,096...1,305,335
Ensembl chr 7:1,251,098...1,305,332 		JBrowse link
G Thoc1 THO complex subunit 1 ISO RGD PMID:22178508 RGD:9743960 NCBI chr18:983,824...1,019,123
Ensembl chr18:983,824...1,019,114 		JBrowse link
G Thoc2 THO complex subunit 2 ISO RGD PMID:22178508 RGD:9743960 NCBI chr  X:120,634,966...120,749,569
Ensembl chr  X:120,634,968...120,749,513 		JBrowse link
G Thoc5 THO complex subunit 5 ISO RGD PMID:22178508 RGD:9743960 NCBI chr14:79,758,805...79,792,718
Ensembl chr14:79,758,917...79,792,718 		JBrowse link
G Thoc6 THO complex subunit 6 ISO RGD PMID:22178508 RGD:9743960 NCBI chr10:12,700,051...12,705,411
Ensembl chr10:12,700,051...12,706,925 		JBrowse link
G Thoc7 THO complex subunit 7 ISO RGD PMID:22178508 RGD:9743960 NCBI chr15:11,262,362...11,277,200
Ensembl chr15:11,262,613...11,277,193 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    regulatory pathway 3871
      transport pathway 470
        RNA transport pathway 152
          mRNA nuclear export pathway + 37
          rRNA nuclear export pathway 0
          tRNA nuclear export pathway 0
paths to the root