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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:pentose phosphate pathway - non-oxidative phase
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Accession:PW:0000574 term browser browse the term
Definition:The non-oxidative (circular) phase of the pentose phosphate pathway involves conversion of ribulose-5-phosphate to ribose-5-phosphate, important in the synthesis of nucleotides and nucleic acids, or of 3 or 6 carbon sugars.
Synonyms:related_synonym: pentose-phosphate shunt, non-oxidative branch


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pentose phosphate pathway - non-oxidative phase term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rpe ribulose-5-phosphate-3-epimerase TAS RGD PMID:12721358 RGD:1641814 NCBI chr 9:68,191,027...68,211,295
Ensembl chr 9:68,191,292...68,211,591 		JBrowse link
G Rpia ribose 5-phosphate isomerase A TAS RGD PMID:12721358 RGD:1641814 NCBI chr 4:102,723,712...102,749,374
Ensembl chr 4:102,723,712...102,749,355 		JBrowse link
G Taldo1 transaldolase 1 IDA
TAS		 RGD PMID:8477719 PMID:12721358 RGD:1641803, RGD:1641814 NCBI chr 1:196,493,634...196,503,965
Ensembl chr 1:196,493,589...196,503,974 		JBrowse link
G Tkt transketolase TAS
IDA		 RGD PMID:9924800 PMID:16116031 PMID:12721358 RGD:1641798, RGD:1580394, RGD:1641814 NCBI chr16:5,723,764...5,748,702
Ensembl chr16:5,723,762...5,748,698 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6092
    classic metabolic pathway 1854
      carbohydrate metabolic pathway 526
        glucose metabolic pathway 153
          pentose phosphate pathway 27
            pentose phosphate pathway - non-oxidative phase 4
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