PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: calcium/calmodulin dependent kinase signaling pathway
Accession: PW:0000316
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Definition: The multifunctional calcium/calmodulin-dependent serine/threonine kinases (CAMKs) play important regulatory roles in the cardiac, muscle, nervous and immune tissues. They are represented by CAMK2 whose Ca2+/CaM binding leads to autophosphorylation and activation and the CAMK cascades that depend on an upstream CAMK kinase (CAMKK) for phosphorylation of an 'activation loop' and subsequent activation. CAMK1 and CAMK4 are the two CAMK signaling cascades.
Synonyms: related_synonym: CaMK signaling pathway; calmodulin dependent kinase signaling pathway
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Ednrb
endothelin receptor type B
IMP
RGD
PMID:15245872
RGD:1581866
NCBI chr15:80,640,839...80,672,115
Ensembl chr15:80,643,043...80,672,115
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Cacna1c
calcium voltage-gated channel subunit alpha1 C
ISO
RGD
PMID:23091085
RGD:7240708
NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
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Cacnb2
calcium voltage-gated channel auxiliary subunit beta 2
ISO
RGD
PMID:23091085
RGD:7240708
NCBI chr17:77,564,630...77,910,000
Ensembl chr17:77,564,460...77,909,106
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Cacng2
calcium voltage-gated channel auxiliary subunit gamma 2
ISO
RGD
PMID:22334212
RGD:7240704
NCBI chr 7:109,572,838...109,698,516
Ensembl chr 7:109,574,459...109,697,227
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Calm1
calmodulin 1
ISO
RGD
PMID:22717267 PMID:23091085
RGD:7240705 , RGD:7240708
NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227
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Calm2
calmodulin 2
ISO
RGD
PMID:22717267 PMID:23091085
RGD:7240705 , RGD:7240708
NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287 Ensembl chr15:7,091,567...7,104,287
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Calm3
calmodulin 3
ISO
RGD
PMID:22717267 PMID:23091085
RGD:7240705 , RGD:7240708
NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207
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Camk2a
calcium/calmodulin-dependent protein kinase II alpha
ISO
RGD
PMID:22334212 PMID:22717267
RGD:7240704 , RGD:7240705
NCBI chr18:54,378,642...54,441,120
Ensembl chr18:54,378,784...54,438,994
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Camk2b
calcium/calmodulin-dependent protein kinase II beta
ISO
RGD
PMID:22334212 PMID:22717267
RGD:7240704 , RGD:7240705
NCBI chr14:80,845,206...80,934,172
Ensembl chr14:80,845,238...80,933,994
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Camk2d
calcium/calmodulin-dependent protein kinase II delta
ISO
RGD
PMID:22717267 PMID:23091085
RGD:7240705 , RGD:7240708
NCBI chr 2:215,023,785...215,287,351
Ensembl chr 2:215,024,004...215,286,178
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Camk2g
calcium/calmodulin-dependent protein kinase II gamma
ISO
RGD
PMID:22717267
RGD:7240705
NCBI chr15:3,504,017...3,563,050
Ensembl chr15:3,504,085...3,563,050
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Camk2n1
calcium/calmodulin-dependent protein kinase II inhibitor 1
ISO
RGD
PMID:21070840 PMID:21301225
RGD:7240706 , RGD:7240707
NCBI chr 5:150,674,819...150,676,600
Ensembl chr 5:150,673,507...150,676,600
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Camk2n2
calcium/calmodulin-dependent protein kinase II inhibitor 2
ISO
RGD
PMID:21070840 PMID:21301225
RGD:7240706 , RGD:7240707
NCBI chr11:80,289,702...80,290,829
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Dlg1
discs large MAGUK scaffold protein 1
ISO
RGD
PMID:22717267
RGD:7240705
NCBI chr11:68,911,883...69,103,230
Ensembl chr11:68,911,883...69,102,689
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Gria1
glutamate ionotropic receptor AMPA type subunit 1
ISO
RGD
PMID:22334212
RGD:7240704
NCBI chr10:41,210,713...41,527,283
Ensembl chr10:41,210,713...41,527,283
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Grin1
glutamate ionotropic receptor NMDA type subunit 1
ISO
RGD
PMID:22717267
RGD:7240705
NCBI chr 3:8,103,680...8,130,603
Ensembl chr 3:8,103,680...8,130,603
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Grin2a
glutamate ionotropic receptor NMDA type subunit 2A
ISO
RGD
PMID:22717267
RGD:7240705
NCBI chr10:5,629,683...6,053,262
Ensembl chr10:5,631,369...6,044,637
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Grin2b
glutamate ionotropic receptor NMDA type subunit 2B
ISO
RGD
PMID:22334212 PMID:22717267
RGD:7240704 , RGD:7240705
NCBI chr 4:168,580,824...169,044,110
Ensembl chr 4:168,599,546...169,042,279
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Hdac4
histone deacetylase 4
ISO
RGD
PMID:21255680
RGD:7241019
NCBI chr 9:92,503,467...92,750,164
Ensembl chr 9:92,507,611...92,750,164
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Hdac5
histone deacetylase 5
ISO
RGD
PMID:21255680
RGD:7241019
NCBI chr10:87,152,978...87,187,921
Ensembl chr10:87,152,978...87,188,235
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Lrrc7
leucine rich repeat containing 7
ISO
RGD
PMID:22717267
RGD:7240705
NCBI chr 2:247,146,616...247,634,945
Ensembl chr 2:247,147,752...247,634,547
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Pln
phospholamban
ISO
RGD
PMID:23091085
RGD:7240708
NCBI chr20:32,629,537...32,639,559
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Ppm1e
protein phosphatase, Mg2+/Mn2+ dependent, 1E
ISO
RGD
PMID:18454172
RGD:7241020
NCBI chr10:72,051,643...72,187,439
Ensembl chr10:72,055,208...72,187,282
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Ppm1f
protein phosphatase, Mg2+/Mn2+ dependent, 1F
TAS
RGD
PMID:18454172
RGD:7241020
NCBI chr11:84,064,422...84,094,410
Ensembl chr11:84,064,420...84,094,340
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Ppp1cc
protein phosphatase 1 catalytic subunit gamma
ISO
RGD
PMID:18454172
RGD:7241020
NCBI chr12:34,383,072...34,400,553
Ensembl chr12:34,383,072...34,400,553
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Ppp2ca
protein phosphatase 2 catalytic subunit alpha
TAS
RGD
PMID:18454172
RGD:7241020
NCBI chr10:36,358,110...36,377,864
Ensembl chr10:36,358,101...36,377,862
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Ryr2
ryanodine receptor 2
ISO
RGD
PMID:23091085
RGD:7240708
NCBI chr17:58,389,925...58,975,641
Ensembl chr17:58,389,925...58,975,142
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Scn5a
sodium voltage-gated channel alpha subunit 5
ISO
RGD
PMID:23091085
RGD:7240708
NCBI chr 8:119,220,905...119,318,816
Ensembl chr 8:119,220,905...119,318,769
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Syngap1
synaptic Ras GTPase activating protein 1
ISO
RGD
PMID:22717267
RGD:7240705
NCBI chr20:5,026,366...5,056,659
Ensembl chr20:5,026,364...5,056,672
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