decreased T cell number - Ontology Report

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Keyword

ONTOLOGY REPORT - ANNOTATIONS

Term:	decreased T cell number	go back to main search page
Accession:	MP:0005018	browse the term
Definition:	fewer than normal T cell numbers
Synonyms:	exact_synonym:	decreased T cell count; reduced T cell number; reduced T lymphocyte number; reduced T-cell count

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decreased T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Abl1	c-abl oncogene 1, non-receptor tyrosine kinase		IAGP	2	31,544,076	31,659,747	RGD:5509061	MGI
G	Ada	adenosine deaminase		IAGP	2	163,552,320	163,575,913	RGD:5509061	MGI
G	Adam10	a disintegrin and metallopeptidase domain 10		IAGP	9	70,526,808	70,628,036	RGD:5509061	MGI
G	Adam17	a disintegrin and metallopeptidase domain 17		IAGP	12	21,329,370	21,379,452	RGD:5509061	MGI
G	Adrbk1	adrenergic receptor kinase, beta 1		IAGP	19	4,286,001	4,305,955	RGD:5509061	MGI
G	Apc	adenomatosis polyposis coli		IAGP	18	34,380,638	34,481,844	RGD:5509061	MGI
G	Apex2	apurinic/apyrimidinic endonuclease 2		IAGP	X	147,006,050	147,022,692	RGD:5509061	MGI
G	Apoe	apolipoprotein E		IAGP	7	20,281,593	20,284,515	RGD:5509061	MGI
G	Arhgdia	Rho GDP dissociation inhibitor (GDI) alpha		IAGP	11	120,438,549	120,442,934	RGD:5509061	MGI
G	Arhgdib	Rho, GDP dissociation inhibitor (GDI) beta		IAGP	6	136,872,230	136,890,238	RGD:5509061	MGI
G	Arid4a	AT rich interactive domain 4A (RBP1-like)		IAGP	12	72,116,954	72,200,338	RGD:5509061	MGI
G	Arid4b	AT rich interactive domain 4B (RBP1-like)		IAGP	13	14,156,059	14,291,870	RGD:5509061	MGI
G	Asxl1	additional sex combs like 1		IAGP	2	153,171,875	153,229,743	RGD:5509061	MGI
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Atp11c	ATPase, class VI, type 11C		IAGP	X	57,476,467	57,657,156	RGD:5509061	MGI
G	Bcl11a	B cell CLL/lymphoma 11A (zinc finger protein)		IAGP	11	23,978,056	24,073,558	RGD:5509061	MGI
G	Bcl2	B cell leukemia/lymphoma 2		IAGP	1	108,434,756	108,610,867	RGD:5509061	MGI
G	Birc5	baculoviral IAP repeat-containing 5		IAGP	11	117,710,551	117,717,057	RGD:5509061	MGI
G	Casp8	caspase 8		IAGP	1	58,852,218	58,904,347	RGD:5509061	MGI
G	Cblb	Casitas B-lineage lymphoma b		IAGP	16	52,031,662	52,208,160	RGD:5509061	MGI
G	Ccl19	chemokine (C-C motif) ligand 19		IAGP	4	42,768,057	42,770,050	RGD:5509061	MGI
G	Ccr5	chemokine (C-C motif) receptor 5		IAGP	9	124,036,282	124,041,922	RGD:5509061	MGI
G	Ccr7	chemokine (C-C motif) receptor 7		IAGP	11	99,005,513	99,016,391	RGD:5509061	MGI
G	Ccr9	chemokine (C-C motif) receptor 9		IAGP	9	123,676,329	123,692,575	RGD:5509061	MGI
G	Cd19	CD19 antigen		IAGP	7	133,551,962	133,558,384	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Cd4	CD4 antigen		IEA	6	124,814,711	124,838,227	RGD:5509061	MGI
G	Cd47	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)		IAGP	16	49,855,767	49,911,801	RGD:5509061	MGI
G	Cd79a	CD79A antigen (immunoglobulin-associated alpha)		IAGP	7	25,682,530	25,687,216	RGD:5509061	MGI
G	Chst3	carbohydrate (chondroitin 6/keratan) sulfotransferase 3		IAGP	10	59,644,275	59,682,008	RGD:5509061	MGI
G	Cops8	COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)		IAGP	1	92,500,000	92,509,916	RGD:5509061	MGI
G	Coro1a	coronin, actin binding protein 1A		IAGP	7	133,843,288	133,848,268	RGD:5509061	MGI
G	Crebbp	CREB binding protein		IAGP	16	4,084,048	4,213,404	RGD:5509061	MGI
G	Ctcf	CCCTC-binding factor		IAGP	8	108,160,438	108,206,822	RGD:5509061	MGI
G	Ctla4	cytotoxic T-lymphocyte-associated protein 4		IAGP	1	60,965,869	60,972,674	RGD:5509061	MGI
G	Cxcr4	chemokine (C-X-C motif) receptor 4		IAGP	1	130,484,776	130,488,876	RGD:5509061	MGI
G	Cycs	cytochrome c, somatic		IAGP	6	50,512,562	50,516,473	RGD:5509061	MGI
G	Cyp27b1	cytochrome P450, family 27, subfamily b, polypeptide 1		IAGP	10	126,485,302	126,490,062	RGD:5509061	MGI
G	Dck	deoxycytidine kinase		IAGP	5	89,194,038	89,212,302	RGD:5509061	MGI
G	Ddx58	DEAD (Asp-Glu-Ala-Asp) box polypeptide 58		IAGP	4	40,150,810	40,186,858	RGD:5509061	MGI
G	Diap1	diaphanous homolog 1 (Drosophila)		IAGP	18	38,004,478	38,095,065	RGD:5509061	MGI
G	Dicer1	dicer 1, ribonuclease type III		IAGP	12	105,925,952	105,990,162	RGD:5509061	MGI
G	Dicer1	dicer 1, ribonuclease type III		IAGP	12	105,925,952	105,990,162	RGD:5509061	MGI
G	Dmd	dystrophin, muscular dystrophy		IAGP	X	80,194,209	82,450,389	RGD:5509061	MGI
G	Dock2	dedicator of cyto-kinesis 2		IAGP	11	34,126,864	34,414,545	RGD:5509061	MGI
G	Dock2	dedicator of cyto-kinesis 2		IAGP	11	34,126,864	34,414,545	RGD:5509061	MGI
G	Dock8	dedicator of cytokinesis 8		IAGP	19	25,074,019	25,276,922	RGD:5509061	MGI
G	Efnb1	ephrin B1		IAGP	X	96,331,469	96,344,330	RGD:5509061	MGI
G	Efnb2	ephrin B2		IAGP	8	8,617,439	8,660,773	RGD:5509061	MGI
G	Elk4	ELK4, member of ETS oncogene family		IAGP	1	133,904,182	133,922,261	RGD:5509061	MGI
G	Ets1	E26 avian leukemia oncogene 1, 5' domain		IAGP	9	32,503,627	32,565,405	RGD:5509061	MGI
G	Fas	Fas (TNF receptor superfamily member 6)		IAGP	19	34,365,149	34,402,260	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxo1	forkhead box O1		IAGP	3	52,072,259	52,154,031	RGD:5509061	MGI
G	Foxo1	forkhead box O1		IAGP	3	52,072,259	52,154,031	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	Galnt1	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1		IAGP	18	24,363,845	24,445,317	RGD:5509061	MGI
G	Gata3	GATA binding protein 3		IAGP	2	9,778,705	9,800,227	RGD:5509061	MGI
G	Gfi1	growth factor independent 1		IAGP	5	108,145,674	108,153,363	RGD:5509061	MGI
G	Gimap5	GTPase, IMAP family member 5		IAGP	6	48,696,196	48,704,199	RGD:5509061	MGI
G	Gon4l	gon-4-like (C.elegans)		IAGP	3	88,639,150	88,714,021	RGD:5509061	MGI
G	Gpr30	G protein-coupled receptor 30		IAGP	5	139,899,133	139,903,754	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	H2afx	H2A histone family, member X		IAGP	9	44,142,798	44,144,160	RGD:5509061	MGI
G	Hax1	HCLS1 associated X-1		IAGP	3	89,799,379	89,802,608	RGD:5509061	MGI
G	Hnrnpl	heterogeneous nuclear ribonucleoprotein L		IAGP	7	29,595,909	29,607,285	RGD:5509061	MGI
G	Hr	hairless		IAGP	14	70,953,863	70,973,350	RGD:5509061	MGI
G	Hrh1	histamine receptor H1		IAGP	6	114,347,930	114,433,290	RGD:5509061	MGI
G	Icos	inducible T cell co-stimulator		IAGP	1	61,034,758	61,057,164	RGD:5509061	MGI
G	Ifitm1	interferon induced transmembrane protein 1		IAGP	7	148,153,328	148,155,726	RGD:5509061	MGI
G	Igbp1	immunoglobulin (CD79A) binding protein 1		IAGP	X	97,689,630	97,711,464	RGD:5509061	MGI
G	Igh	immunoglobulin heavy chain complex		IAGP	12	114,496,979	117,248,165	RGD:5509061	MGI
G	Ikbkb	inhibitor of kappaB kinase beta		IAGP	8	23,769,677	23,817,055	RGD:5509061	MGI
G	Ikbkg	inhibitor of kappaB kinase gamma		IAGP	X	71,638,630	71,699,117	RGD:5509061	MGI
G	Il10ra	interleukin 10 receptor, alpha		IAGP	9	45,061,922	45,077,229	RGD:5509061	MGI
G	Il1r1	interleukin 1 receptor, type I		IAGP	1	40,281,925	40,373,022	RGD:5509061	MGI
G	Il23a	interleukin 23, alpha subunit p19		IAGP	10	127,733,196	127,735,140	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il6	interleukin 6		IAGP	5	30,339,701	30,346,508	RGD:5509061	MGI
G	Il7	interleukin 7		IAGP	3	7,572,077	7,613,427	RGD:5509061	MGI
G	Il7	interleukin 7		IAGP	3	7,572,077	7,613,427	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Irf2	interferon regulatory factor 2		IAGP	8	47,825,099	47,932,812	RGD:5509061	MGI
G	Irf4	interferon regulatory factor 4		IAGP	13	30,841,127	30,858,796	RGD:5509061	MGI
G	Itga4	integrin alpha 4		IAGP	2	79,095,583	79,173,271	RGD:5509061	MGI
G	Itga6	integrin alpha 6		IAGP	2	71,625,140	71,694,815	RGD:5509061	MGI
G	Itgae	integrin alpha E, epithelial-associated		IAGP	11	72,904,097	72,960,951	RGD:5509061	MGI
G	Itk	IL2 inducible T cell kinase		IAGP	11	46,138,652	46,203,017	RGD:5509061	MGI
G	Itk	IL2 inducible T cell kinase		IAGP	11	46,138,652	46,203,017	RGD:5509061	MGI
G	Jak3	Janus kinase 3		IEA	8	74,200,473	74,214,473	RGD:5509061	MGI
G	Kitl	kit ligand		IAGP	10	99,478,458	99,563,046	RGD:5509061	MGI
G	Klf2	Kruppel-like factor 2 (lung)		IAGP	8	74,842,961	74,845,553	RGD:5509061	MGI
G	Klrk1	killer cell lectin-like receptor subfamily K, member 1		IAGP	6	129,560,339	129,573,859	RGD:5509061	MGI
G	Kmt2e	lysine (K)-specific methyltransferase 2E		IAGP	5	22,940,247	23,010,047	RGD:5509061	MGI
G	Lama2	laminin, alpha 2		IAGP	10	26,701,091	27,336,748	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lbr	lamin B receptor		IAGP	1	183,745,446	183,772,532	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lcp2	lymphocyte cytosolic protein 2		IAGP	11	33,947,201	33,992,280	RGD:5509061	MGI
G	Lrfn2	leucine rich repeat and fibronectin type III domain containing 2		IAGP	17	49,071,907	49,236,915	RGD:5509061	MGI
G	Lta	lymphotoxin A		IAGP	17	35,340,110	35,342,296	RGD:5509061	MGI
G	Lta	lymphotoxin A		IAGP	17	35,340,110	35,342,296	RGD:5509061	MGI
G	Lyst	lysosomal trafficking regulator		IAGP	13	13,682,676	13,869,707	RGD:5509061	MGI
G	Lyve1	lymphatic vessel endothelial hyaluronan receptor 1		IAGP	7	117,994,121	118,006,467	RGD:5509061	MGI
G	Map3k14	mitogen-activated protein kinase kinase kinase 14		IAGP	11	103,081,078	103,128,715	RGD:5509061	MGI
G	Map3k7	mitogen-activated protein kinase kinase kinase 7		IAGP	4	32,051,082	32,110,442	RGD:5509061	MGI
G	Map3k7	mitogen-activated protein kinase kinase kinase 7		IAGP	4	32,051,082	32,110,442	RGD:5509061	MGI
G	Mapk3	mitogen-activated protein kinase 3		IAGP	7	133,903,140	133,909,330	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mdm2	transformed mouse 3T3 cell double minute 2		IAGP	10	117,125,961	117,147,772	RGD:5509061	MGI
G	Mefv	Mediterranean fever		IAGP	16	3,707,215	3,718,124	RGD:5509061	MGI
G	Mertk	c-mer proto-oncogene tyrosine kinase		IAGP	2	128,524,733	128,627,923	RGD:5509061	MGI
G	Mgat2	mannoside acetylglucosaminyltransferase 2		IAGP	12	70,285,145	70,287,760	RGD:5509061	MGI
G	Mpz	myelin protein zero		IAGP	1	173,080,844	173,091,254	RGD:5509061	MGI
G	Mrc1	mannose receptor, C type 1		IAGP	2	14,151,041	14,253,650	RGD:5509061	MGI
G	Mt1	metallothionein 1		IAGP	8	96,702,989	96,704,227	RGD:5509061	MGI
G	Mt2	metallothionein 2		IAGP	8	96,696,518	96,697,467	RGD:5509061	MGI
G	Myc	myelocytomatosis oncogene		IAGP	15	61,816,896	61,821,916	RGD:5509061	MGI
G	Nampt	nicotinamide phosphoribosyltransferase		IAGP	12	33,505,200	33,538,234	RGD:5509061	MGI
G	Nbn	nibrin		IAGP	4	15,885,114	15,919,736	RGD:5509061	MGI
G	Ncaph2	non-SMC condensin II complex, subunit H2		IAGP	15	89,186,153	89,203,259	RGD:5509061	MGI
G	Nfatc2	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2		IAGP	2	168,301,910	168,427,155	RGD:5509061	MGI
G	Nfatc3	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3		IAGP	8	108,583,503	108,654,437	RGD:5509061	MGI
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		IAGP	2	75,513,576	75,542,698	RGD:5509061	MGI
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105		IAGP	3	135,247,619	135,354,511	RGD:5509061	MGI
G	Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100		IAGP	19	46,379,227	46,386,580	RGD:5509061	MGI
G	Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)		IAGP	19	43,686,815	43,690,382	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Ogt	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)		IAGP	X	98,835,403	98,879,690	RGD:5509061	MGI
G	Pbx1	pre B cell leukemia homeobox 1		IAGP	1	170,049,495	170,362,389	RGD:5509061	MGI
G	Pcsk1	proprotein convertase subtilisin/kexin type 1		IAGP	13	75,227,435	75,269,946	RGD:5509061	MGI
G	Pdpk1	3-phosphoinositide dependent protein kinase 1		IAGP	17	24,210,647	24,278,561	RGD:5509061	MGI
G	Pgm3	phosphoglucomutase 3		IAGP	9	86,446,083	86,465,449	RGD:5509061	MGI
G	Pik3cd	phosphatidylinositol 3-kinase catalytic delta polypeptide		IAGP	4	149,023,277	149,075,738	RGD:5509061	MGI
G	Pik3cd	phosphatidylinositol 3-kinase catalytic delta polypeptide		IAGP	4	149,023,277	149,075,738	RGD:5509061	MGI
G	Pik3cd	phosphatidylinositol 3-kinase catalytic delta polypeptide		IAGP	4	149,023,277	149,075,738	RGD:5509061	MGI
G	Pik3cg	phosphoinositide-3-kinase, catalytic, gamma polypeptide		IAGP	12	32,858,262	32,893,514	RGD:5509061	MGI
G	Pik3cg	phosphoinositide-3-kinase, catalytic, gamma polypeptide		IAGP	12	32,858,262	32,893,514	RGD:5509061	MGI
G	Pla2g10	phospholipase A2, group X		IAGP	16	13,715,155	13,730,678	RGD:5509061	MGI
G	Plcg1	phospholipase C, gamma 1		IAGP	2	160,557,046	160,601,496	RGD:5509061	MGI
G	Pou2af1	POU domain, class 2, associating factor 1		IAGP	9	51,021,795	51,048,184	RGD:5509061	MGI
G	Ppp3cb	protein phosphatase 3, catalytic subunit, beta isoform		IAGP	14	21,318,536	21,365,795	RGD:5509061	MGI
G	Prkch	protein kinase C, eta		IAGP	12	74,686,028	74,879,172	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Ptcra	pre T cell antigen receptor alpha		IAGP	17	46,892,612	46,900,661	RGD:5509061	MGI
G	Ptpn2	protein tyrosine phosphatase, non-receptor type 2		IAGP	18	67,825,155	67,884,275	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Rad50	RAD50 homolog (S. cerevisiae)		IAGP	11	53,463,021	53,520,821	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rasa3	RAS p21 protein activator 3		IAGP	8	13,567,218	13,677,587	RGD:5509061	MGI
G	Rassf2	Ras association (RalGDS/AF-6) domain family member 2		IAGP	2	131,818,586	131,855,724	RGD:5509061	MGI
G	Relb	avian reticuloendotheliosis viral (v-rel) oncogene related B		IAGP	7	20,191,571	20,214,787	RGD:5509061	MGI
G	Relb	avian reticuloendotheliosis viral (v-rel) oncogene related B		IAGP	7	20,191,571	20,214,787	RGD:5509061	MGI
G	Rhoh	ras homolog gene family, member H		IAGP	5	66,254,808	66,287,939	RGD:5509061	MGI
G	Rhoh	ras homolog gene family, member H		IAGP	5	66,254,808	66,287,939	RGD:5509061	MGI
G	Rnf8	ring finger protein 8		IAGP	17	29,751,776	29,778,604	RGD:5509061	MGI
G	Rorc	RAR-related orphan receptor gamma		IAGP	3	94,176,748	94,202,161	RGD:5509061	MGI
G	Rpl22	ribosomal protein L22		IAGP	4	151,699,987	151,708,180	RGD:5509061	MGI
G	Rras2	related RAS viral (r-ras) oncogene homolog 2		IAGP	7	121,190,296	121,261,295	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Ruvbl2	RuvB-like protein 2		IAGP	7	52,677,268	52,689,834	RGD:5509061	MGI
G	Scmh1	sex comb on midleg homolog 1		IAGP	4	120,077,886	120,202,804	RGD:5509061	MGI
G	Sema4d	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D		IAGP	13	51,796,617	51,889,013	RGD:5509061	MGI
G	Serpini2	serine (or cysteine) peptidase inhibitor, clade I, member 2		IAGP	3	75,046,293	75,074,000	RGD:5509061	MGI
G	Sfpi1	SFFV proviral integration 1		IAGP	2	90,936,954	90,955,913	RGD:5509061	MGI
G	Sgpl1	sphingosine phosphate lyase 1		IAGP	10	60,561,390	60,610,413	RGD:5509061	MGI
G	Siae	sialic acid acetylesterase		IAGP	9	37,421,432	37,455,903	RGD:5509061	MGI
G	Sirpa	signal-regulatory protein alpha		IAGP	2	129,418,575	129,457,964	RGD:5509061	MGI
G	Sphk1	sphingosine kinase 1		IAGP	11	116,393,225	116,397,989	RGD:5509061	MGI
G	Sphk1	sphingosine kinase 1		IAGP	11	116,393,225	116,397,989	RGD:5509061	MGI
G	Sphk2	sphingosine kinase 2		IAGP	7	52,964,833	52,973,372	RGD:5509061	MGI
G	Sphk2	sphingosine kinase 2		IAGP	7	52,964,833	52,973,372	RGD:5509061	MGI
G	Spp1	secreted phosphoprotein 1		IAGP	5	104,869,403	104,879,477	RGD:5509061	MGI
G	Srf	serum response factor		IAGP	17	46,683,788	46,693,111	RGD:5509061	MGI
G	Srsf2	serine/arginine-rich splicing factor 2		IAGP	11	116,711,211	116,714,408	RGD:5509061	MGI
G	Stam	signal transducing adaptor molecule (SH3 domain and ITAM motif) 1		IAGP	2	13,995,739	14,069,965	RGD:5509061	MGI
G	Stam2	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2		IAGP	2	52,547,725	52,601,183	RGD:5509061	MGI
G	Stat5a	signal transducer and activator of transcription 5A		IAGP	11	100,720,665	100,746,483	RGD:5509061	MGI
G	Stat5b	signal transducer and activator of transcription 5B		IAGP	11	100,642,045	100,711,899	RGD:5509061	MGI
G	Stk4	serine/threonine kinase 4		IAGP	2	163,899,914	163,981,257	RGD:5509061	MGI
G	Stk4	serine/threonine kinase 4		IAGP	2	163,899,914	163,981,257	RGD:5509061	MGI
G	Stk4	serine/threonine kinase 4		IAGP	2	163,899,914	163,981,257	RGD:5509061	MGI
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IAGP	18	37,800,145	37,803,858	RGD:5509061	MGI
G	Tapbp	TAP binding protein		IAGP	17	34,056,423	34,066,235	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
G	Tcf3	transcription factor 3		IAGP	10	79,871,910	79,896,398	RGD:5509061	MGI
G	Tcf7	transcription factor 7, T cell specific		IAGP	11	52,066,106	52,096,073	RGD:5509061	MGI
G	Tcirg1	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3		IAGP	19	3,896,050	3,907,133	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcrb	T cell receptor beta chain		IAGP	6	40,841,295	41,508,370	RGD:5509061	MGI
G	Tcrb	T cell receptor beta chain		IAGP	6	40,841,295	41,508,370	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
G	Tespa1	thymocyte expressed, positive selection associated 1		IAGP	10	129,759,908	129,799,698	RGD:5509061	MGI
G	Tnf	tumor necrosis factor		IAGP	17	35,336,335	35,338,941	RGD:5509061	MGI
G	Tox	thymocyte selection-associated high mobility group box		IAGP	4	6,614,533	6,917,870	RGD:5509061	MGI
G	Tpp2	tripeptidyl peptidase II		IAGP	1	43,990,852	44,059,816	RGD:5509061	MGI
G	Traf3	TNF receptor-associated factor 3		IAGP	12	112,404,759	112,505,359	RGD:5509061	MGI
G	Traf3ip2	TRAF3 interacting protein 2		IAGP	10	39,332,740	39,375,113	RGD:5509061	MGI
G	Trp53bp1	transformation related protein 53 binding protein 1		IAGP	2	121,022,463	121,097,122	RGD:5509061	MGI
G	Trpm7	transient receptor potential cation channel, subfamily M, member 7		IAGP	2	126,617,294	126,701,997	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav2	vav 2 oncogene		IAGP	2	27,119,155	27,282,345	RGD:5509061	MGI
G	Vav2	vav 2 oncogene		IAGP	2	27,119,155	27,282,345	RGD:5509061	MGI
G	Vav3	vav 3 oncogene		IAGP	3	109,143,601	109,488,612	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Wasl	Wiskott-Aldrich syndrome-like (human)		IAGP	6	24,563,810	24,614,995	RGD:5509061	MGI
G	Xcl1	chemokine (C motif) ligand 1		IAGP	1	166,861,779	166,865,641	RGD:5509061	MGI
G	Zap70	zeta-chain (TCR) associated protein kinase		IAGP	1	36,818,706	36,839,661	RGD:5509061	MGI
G	Zap70	zeta-chain (TCR) associated protein kinase		IAGP	1	36,818,706	36,839,661	RGD:5509061	MGI
G	Zap70	zeta-chain (TCR) associated protein kinase		IAGP	1	36,818,706	36,839,661	RGD:5509061	MGI
G	Zap70	zeta-chain (TCR) associated protein kinase		IAGP	1	36,818,706	36,839,661	RGD:5509061	MGI
G	Zbtb1	zinc finger and BTB domain containing 1		IAGP	12	77,471,253	77,489,734	RGD:5509061	MGI
G	Zeb1	zinc finger E-box binding homeobox 1		IAGP	18	5,591,889	5,774,909	RGD:5509061	MGI
G	Zfx	zinc finger protein X-linked		IAGP	X	91,319,970	91,368,746	RGD:5509061	MGI
absent CD8-positive T cells
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	B2m	beta-2 microglobulin		IAGP	2	121,973,423	121,978,818	RGD:5509061	MGI
G	B2m	beta-2 microglobulin		IAGP	2	121,973,423	121,978,818	RGD:5509061	MGI
G	B2m	beta-2 microglobulin		IAGP	2	121,973,423	121,978,818	RGD:5509061	MGI
G	B2m	beta-2 microglobulin		IAGP	2	121,973,423	121,978,818	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Csk	c-src tyrosine kinase		IAGP	9	57,474,453	57,492,987	RGD:5509061	MGI
G	Dll4	delta-like 4 (Drosophila)		IAGP	2	119,151,520	119,161,402	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	H2-Ab1	histocompatibility 2, class II antigen A, beta 1		IAGP	17	34,400,172	34,406,363	RGD:5509061	MGI
G	H2-D1	histocompatibility 2, D region locus 1		IAGP	17	35,400,039	35,404,442	RGD:5509061	MGI
G	H2-K1	histocompatibility 2, K1, K region		IAGP	17	34,132,957	34,137,278	RGD:5509061	MGI
G	Itpkb	inositol 1,4,5-trisphosphate 3-kinase B		IAGP	1	182,260,607	182,353,790	RGD:5509061	MGI
G	Itpkc	inositol 1,4,5-trisphosphate 3-kinase C		IAGP	7	27,992,189	28,013,616	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lig4	ligase IV, DNA, ATP-dependent		IEA	8	9,970,020	9,976,323	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mpz	myelin protein zero		IAGP	1	173,080,844	173,091,254	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IAGP	9	21,420,613	21,508,674	RGD:5509061	MGI
G	Tap1	transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)		IAGP	17	34,324,501	34,334,170	RGD:5509061	MGI
G	Tap2	transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)		IEA	17	34,341,424	34,353,266	RGD:5509061	MGI
G	Tcrb	T cell receptor beta chain		IAGP	6	40,841,295	41,508,370	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
absent NK T cells
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Lyst	lysosomal trafficking regulator		IEA	13	13,682,676	13,869,707	RGD:5509061	MGI
G	Pdpk1	3-phosphoinositide dependent protein kinase 1		IAGP	17	24,210,647	24,278,561	RGD:5509061	MGI
G	Sh2d1a	SH2 domain protein 1A		IAGP	X	39,855,785	39,875,252	RGD:5509061	MGI
G	Tbx21	T-box 21		IAGP	11	96,959,321	96,976,645	RGD:5509061	MGI
G	Tbx21	T-box 21		IAGP	11	96,959,321	96,976,645	RGD:5509061	MGI
absent regulatory T cells
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Map3k7	mitogen-activated protein kinase kinase kinase 7		IAGP	4	32,051,082	32,110,442	RGD:5509061	MGI
absent single-positive T cells
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cd3d	CD3 antigen, delta polypeptide		IAGP	9	44,789,869	44,795,135	RGD:5509061	MGI
G	Cd3g	CD3 antigen, gamma polypeptide		IAGP	9	44,777,655	44,788,514	RGD:5509061	MGI
G	Ins2	insulin II		IAGP	7	149,864,561	149,865,613	RGD:5509061	MGI
G	Itpkb	inositol 1,4,5-trisphosphate 3-kinase B		IAGP	1	182,260,607	182,353,790	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Prf1	perforin 1 (pore forming protein)		IAGP	10	60,760,584	60,767,011	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
absent T cells
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bcl11b	B cell leukemia/lymphoma 11B		IAGP	12	109,148,613	109,241,624	RGD:5509061	MGI
G	Bcl2l11	BCL2-like 11 (apoptosis facilitator)		IAGP	2	127,951,774	127,988,283	RGD:5509061	MGI
G	Cbfb	core binding factor beta		IAGP	8	107,694,574	107,741,889	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	Ikzf1	IKAROS family zinc finger 1		IAGP	11	11,586,216	11,672,929	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Klf2	Kruppel-like factor 2 (lung)		IAGP	8	74,842,961	74,845,553	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lyz2	lysozyme 2		IAGP	10	116,714,597	116,719,328	RGD:5509061	MGI
G	Nlrp3	NLR family, pyrin domain containing 3		IAGP	11	59,356,188	59,380,458	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IEA	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Xrcc5	X-ray repair complementing defective repair in Chinese hamster cells 5		IAGP	1	72,353,995	72,441,527	RGD:5509061	MGI
G	Zap70	zeta-chain (TCR) associated protein kinase		IEA	1	36,818,706	36,839,661	RGD:5509061	MGI
G	Zbtb1	zinc finger and BTB domain containing 1		IAGP	12	77,471,253	77,489,734	RGD:5509061	MGI
decreased activated T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Bcl10	B cell leukemia/lymphoma 10		IAGP	3	145,587,342	145,597,247	RGD:5509061	MGI
G	Fadd	Fas (TNFRSF6)-associated via death domain		IAGP	7	151,764,228	151,768,341	RGD:5509061	MGI
G	Fas	Fas (TNF receptor superfamily member 6)		IAGP	19	34,365,149	34,402,260	RGD:5509061	MGI
G	H2-M3	histocompatibility 2, M region locus 3		IAGP	17	37,407,179	37,411,430	RGD:5509061	MGI
G	Il23a	interleukin 23, alpha subunit p19		IAGP	10	127,733,196	127,735,140	RGD:5509061	MGI
G	Sell	selectin, lymphocyte		IAGP	1	165,992,207	166,010,916	RGD:5509061	MGI
G	Smad7	SMAD family member 7		IAGP	18	75,527,019	75,555,588	RGD:5509061	MGI
decreased CD4-positive, alpha-beta memory T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha		IAGP	12	56,590,396	56,593,634	RGD:5509061	MGI
decreased CD8-positive, alpha-beta memory T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ncr1	natural cytotoxicity triggering receptor 1		IAGP	7	4,289,326	4,296,766	RGD:5509061	MGI
G	Serpina3g	serine (or cysteine) peptidase inhibitor, clade A, member 3G		IAGP	12	105,474,452	105,480,144	RGD:5509061	MGI
decreased DN1 thymic pro-T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Gmnn	geminin		IAGP	13	24,843,714	24,853,806	RGD:5509061	MGI
G	Hes1	hairy and enhancer of split 1 (Drosophila)		IAGP	16	30,065,443	30,067,882	RGD:5509061	MGI
G	Mcm4	minichromosome maintenance deficient 4 homolog (S. cerevisiae)		IAGP	16	15,623,990	15,637,493	RGD:5509061	MGI
G	Prkch	protein kinase C, eta		IAGP	12	74,686,028	74,879,172	RGD:5509061	MGI
G	Prkcq	protein kinase C, theta		IAGP	2	11,094,009	11,222,853	RGD:5509061	MGI
G	Rictor	RPTOR independent companion of MTOR, complex 2		IAGP	15	6,658,381	6,750,401	RGD:5509061	MGI
G	Syk	spleen tyrosine kinase		IAGP	13	52,692,251	52,744,161	RGD:5509061	MGI
decreased DN2 thymocyte number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bcl11a	B cell CLL/lymphoma 11A (zinc finger protein)		IAGP	11	23,978,056	24,073,558	RGD:5509061	MGI
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Hes1	hairy and enhancer of split 1 (Drosophila)		IAGP	16	30,065,443	30,067,882	RGD:5509061	MGI
G	Msi2	musashi RNA-binding protein 2		IAGP	11	88,152,884	88,403,661	RGD:5509061	MGI
G	Prnp	prion protein		IAGP	2	131,735,664	131,764,167	RGD:5509061	MGI
G	Rictor	RPTOR independent companion of MTOR, complex 2		IAGP	15	6,658,381	6,750,401	RGD:5509061	MGI
G	Zbtb1	zinc finger and BTB domain containing 1		IAGP	12	77,471,253	77,489,734	RGD:5509061	MGI
decreased DN3 thymocyte number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hes1	hairy and enhancer of split 1 (Drosophila)		IAGP	16	30,065,443	30,067,882	RGD:5509061	MGI
G	Msi2	musashi RNA-binding protein 2		IAGP	11	88,152,884	88,403,661	RGD:5509061	MGI
G	Rictor	RPTOR independent companion of MTOR, complex 2		IAGP	15	6,658,381	6,750,401	RGD:5509061	MGI
G	Zbtb1	zinc finger and BTB domain containing 1		IAGP	12	77,471,253	77,489,734	RGD:5509061	MGI
decreased DN4 thymocyte number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Efnb1	ephrin B1		IAGP	X	96,331,469	96,344,330	RGD:5509061	MGI
G	Efnb2	ephrin B2		IAGP	8	8,617,439	8,660,773	RGD:5509061	MGI
G	Gmnn	geminin		IAGP	13	24,843,714	24,853,806	RGD:5509061	MGI
G	Hes1	hairy and enhancer of split 1 (Drosophila)		IAGP	16	30,065,443	30,067,882	RGD:5509061	MGI
G	Nkap	NFKB activating protein		IAGP	X	34,666,758	34,690,741	RGD:5509061	MGI
G	Prkch	protein kinase C, eta		IAGP	12	74,686,028	74,879,172	RGD:5509061	MGI
G	Prkcq	protein kinase C, theta		IAGP	2	11,094,009	11,222,853	RGD:5509061	MGI
G	Prnp	prion protein		IAGP	2	131,735,664	131,764,167	RGD:5509061	MGI
G	Ptcra	pre T cell antigen receptor alpha		IAGP	17	46,892,612	46,900,661	RGD:5509061	MGI
G	Rictor	RPTOR independent companion of MTOR, complex 2		IAGP	15	6,658,381	6,750,401	RGD:5509061	MGI
G	Sos1	son of sevenless homolog 1 (Drosophila)		IAGP	17	80,793,092	80,879,793	RGD:5509061	MGI
G	Zbtb1	zinc finger and BTB domain containing 1		IAGP	12	77,471,253	77,489,734	RGD:5509061	MGI
decreased double-negative T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bcl11b	B cell leukemia/lymphoma 11B		IAGP	12	109,148,613	109,241,624	RGD:5509061	MGI
G	Birc5	baculoviral IAP repeat-containing 5		IAGP	11	117,710,551	117,717,057	RGD:5509061	MGI
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Chek2	checkpoint kinase 2		IAGP	5	111,269,036	111,303,152	RGD:5509061	MGI
G	Cpa3	carboxypeptidase A3, mast cell		IAGP	3	20,115,515	20,142,080	RGD:5509061	MGI
G	Fas	Fas (TNF receptor superfamily member 6)		IAGP	19	34,365,149	34,402,260	RGD:5509061	MGI
G	Fas	Fas (TNF receptor superfamily member 6)		IAGP	19	34,365,149	34,402,260	RGD:5509061	MGI
G	Fbxw7	F-box and WD-40 domain protein 7		IAGP	3	84,619,499	84,783,120	RGD:5509061	MGI
G	Flt3l	FMS-like tyrosine kinase 3 ligand		IAGP	7	52,386,559	52,391,802	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Gata3	GATA binding protein 3		IAGP	2	9,778,705	9,800,227	RGD:5509061	MGI
G	Gfi1	growth factor independent 1		IAGP	5	108,145,674	108,153,363	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Ifng	interferon gamma		IAGP	10	117,878,103	117,882,948	RGD:5509061	MGI
G	Igbp1	immunoglobulin (CD79A) binding protein 1		IAGP	X	97,689,630	97,711,464	RGD:5509061	MGI
G	Igh	immunoglobulin heavy chain complex		IAGP	12	114,496,979	117,248,165	RGD:5509061	MGI
G	Ikzf1	IKAROS family zinc finger 1		IAGP	11	11,586,216	11,672,929	RGD:5509061	MGI
G	Il2	interleukin 2		IAGP	3	37,019,635	37,024,876	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il7	interleukin 7		IAGP	3	7,572,077	7,613,427	RGD:5509061	MGI
G	Kat6a	K(lysine) acetyltransferase 6A		IAGP	8	23,970,011	24,053,734	RGD:5509061	MGI
G	Kit	kit oncogene		IAGP	5	75,971,012	76,052,747	RGD:5509061	MGI
G	Kitl	kit ligand		IAGP	10	99,478,458	99,563,046	RGD:5509061	MGI
G	Kmt2e	lysine (K)-specific methyltransferase 2E		IAGP	5	22,940,247	23,010,047	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lcp2	lymphocyte cytosolic protein 2		IAGP	11	33,947,201	33,992,280	RGD:5509061	MGI
G	Lig4	ligase IV, DNA, ATP-dependent		IAGP	8	9,970,020	9,976,323	RGD:5509061	MGI
G	Lrfn2	leucine rich repeat and fibronectin type III domain containing 2		IAGP	17	49,071,907	49,236,915	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mdm2	transformed mouse 3T3 cell double minute 2		IAGP	10	117,125,961	117,147,772	RGD:5509061	MGI
G	Msi2	musashi RNA-binding protein 2		IAGP	11	88,152,884	88,403,661	RGD:5509061	MGI
G	Myb	myeloblastosis oncogene		IAGP	10	20,844,736	20,880,790	RGD:5509061	MGI
G	Nampt	nicotinamide phosphoribosyltransferase		IAGP	12	33,505,200	33,538,234	RGD:5509061	MGI
G	Ncaph2	non-SMC condensin II complex, subunit H2		IAGP	15	89,186,153	89,203,259	RGD:5509061	MGI
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha		IAGP	12	56,590,396	56,593,634	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Pax1	paired box gene 1		IAGP	2	147,190,730	147,200,785	RGD:5509061	MGI
G	Pbx1	pre B cell leukemia homeobox 1		IAGP	1	170,049,495	170,362,389	RGD:5509061	MGI
G	Plcg1	phospholipase C, gamma 1		IAGP	2	160,557,046	160,601,496	RGD:5509061	MGI
G	Prkch	protein kinase C, eta		IAGP	12	74,686,028	74,879,172	RGD:5509061	MGI
G	Prkcq	protein kinase C, theta		IAGP	2	11,094,009	11,222,853	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Rad50	RAD50 homolog (S. cerevisiae)		IAGP	11	53,463,021	53,520,821	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rnf8	ring finger protein 8		IAGP	17	29,751,776	29,778,604	RGD:5509061	MGI
G	Rorc	RAR-related orphan receptor gamma		IAGP	3	94,176,748	94,202,161	RGD:5509061	MGI
G	Rpl22	ribosomal protein L22		IAGP	4	151,699,987	151,708,180	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Sfpi1	SFFV proviral integration 1		IAGP	2	90,936,954	90,955,913	RGD:5509061	MGI
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IAGP	9	21,420,613	21,508,674	RGD:5509061	MGI
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IAGP	9	21,420,613	21,508,674	RGD:5509061	MGI
G	Smc1a	structural maintenance of chromosomes 1A		IAGP	X	148,450,971	148,496,516	RGD:5509061	MGI
G	Sos1	son of sevenless homolog 1 (Drosophila)		IAGP	17	80,793,092	80,879,793	RGD:5509061	MGI
G	Supv3l1	suppressor of var1, 3-like 1 (S. cerevisiae)		IAGP	10	61,892,126	61,912,441	RGD:5509061	MGI
G	Tap1	transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)		IAGP	17	34,324,501	34,334,170	RGD:5509061	MGI
G	Tlr7	toll-like receptor 7		IAGP	X	163,742,863	163,768,460	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav2	vav 2 oncogene		IAGP	2	27,119,155	27,282,345	RGD:5509061	MGI
G	Vav3	vav 3 oncogene		IAGP	3	109,143,601	109,488,612	RGD:5509061	MGI
Q	Lmb2_m	lupus in MRL and B6 F2 cross (mouse)		IAGP				RGD:5509061	MGI
Q	Tcdel1_m	T cell clonal deletion 1 (mouse)		IAGP				RGD:5509061	MGI
Q	Tcdel2_m	T cell clonal deletion 2 (mouse)		IAGP				RGD:5509061	MGI
decreased double-positive T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ada	adenosine deaminase		IAGP	2	163,552,320	163,575,913	RGD:5509061	MGI
G	Adam10	a disintegrin and metallopeptidase domain 10		IAGP	9	70,526,808	70,628,036	RGD:5509061	MGI
G	Adam10	a disintegrin and metallopeptidase domain 10		IAGP	9	70,526,808	70,628,036	RGD:5509061	MGI
G	Aff1	AF4/FMR2 family, member 1		IAGP	5	104,183,181	104,284,341	RGD:5509061	MGI
G	Akt1	thymoma viral proto-oncogene 1		IAGP	12	113,892,032	113,912,487	RGD:5509061	MGI
G	Akt2	thymoma viral proto-oncogene 2		IAGP	7	28,376,579	28,424,472	RGD:5509061	MGI
G	Akt3	thymoma viral proto-oncogene 3		IAGP	1	178,952,246	179,178,898	RGD:5509061	MGI
G	Arhgdia	Rho GDP dissociation inhibitor (GDI) alpha		IAGP	11	120,438,549	120,442,934	RGD:5509061	MGI
G	Arhgdib	Rho, GDP dissociation inhibitor (GDI) beta		IAGP	6	136,872,230	136,890,238	RGD:5509061	MGI
G	Arid5b	AT rich interactive domain 5B (MRF1-like)		IAGP	10	67,558,341	67,741,474	RGD:5509061	MGI
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Bcl10	B cell leukemia/lymphoma 10		IAGP	3	145,587,342	145,597,247	RGD:5509061	MGI
G	Bcl11b	B cell leukemia/lymphoma 11B		IAGP	12	109,148,613	109,241,624	RGD:5509061	MGI
G	Bcl11b	B cell leukemia/lymphoma 11B		IAGP	12	109,148,613	109,241,624	RGD:5509061	MGI
G	Bcl2	B cell leukemia/lymphoma 2		IAGP	1	108,434,756	108,610,867	RGD:5509061	MGI
G	Bcl2l11	BCL2-like 11 (apoptosis facilitator)		IAGP	2	127,951,774	127,988,283	RGD:5509061	MGI
G	Bhlhe40	basic helix-loop-helix family, member e40		IAGP	6	108,610,623	108,616,919	RGD:5509061	MGI
G	Birc5	baculoviral IAP repeat-containing 5		IAGP	11	117,710,551	117,717,057	RGD:5509061	MGI
G	Bmi1	Bmi1 polycomb ring finger oncogene		IAGP	2	18,598,645	18,608,256	RGD:5509061	MGI
G	Brca1	breast cancer 1		IAGP	11	101,350,078	101,413,269	RGD:5509061	MGI
G	Cacnb4	calcium channel, voltage-dependent, beta 4 subunit		IAGP	2	52,283,840	52,532,101	RGD:5509061	MGI
G	Cbfb	core binding factor beta		IAGP	8	107,694,574	107,741,889	RGD:5509061	MGI
G	Cbfb	core binding factor beta		IAGP	8	107,694,574	107,741,889	RGD:5509061	MGI
G	Ccnd3	cyclin D3		IAGP	17	47,642,000	47,736,638	RGD:5509061	MGI
G	Ccnd3	cyclin D3		IAGP	17	47,642,000	47,736,638	RGD:5509061	MGI
G	Ccnd3	cyclin D3		IAGP	17	47,642,000	47,736,638	RGD:5509061	MGI
G	Ccr9	chemokine (C-C motif) receptor 9		IAGP	9	123,676,329	123,692,575	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Cd3e	CD3 antigen, epsilon polypeptide		IAGP	9	44,806,826	44,817,673	RGD:5509061	MGI
G	Cd4	CD4 antigen		IAGP	6	124,814,711	124,838,227	RGD:5509061	MGI
G	Cd4	CD4 antigen		IAGP	6	124,814,711	124,838,227	RGD:5509061	MGI
G	Cd4	CD4 antigen		IAGP	6	124,814,711	124,838,227	RGD:5509061	MGI
G	Cd4	CD4 antigen		IAGP	6	124,814,711	124,838,227	RGD:5509061	MGI
G	Cd5	CD5 antigen		IAGP	19	10,792,633	10,813,464	RGD:5509061	MGI
G	Cd79a	CD79A antigen (immunoglobulin-associated alpha)		IAGP	7	25,682,530	25,687,216	RGD:5509061	MGI
G	Cd80	CD80 antigen		IAGP	16	38,459,013	38,487,015	RGD:5509061	MGI
G	Cd86	CD86 antigen		IAGP	16	36,603,955	36,666,163	RGD:5509061	MGI
G	Cd8a	CD8 antigen, alpha chain		IAGP	6	71,323,421	71,329,165	RGD:5509061	MGI
G	Cd8a	CD8 antigen, alpha chain		IAGP	6	71,323,421	71,329,165	RGD:5509061	MGI
G	Cd8a	CD8 antigen, alpha chain		IAGP	6	71,323,421	71,329,165	RGD:5509061	MGI
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Cdkn1b	cyclin-dependent kinase inhibitor 1B		IAGP	6	134,870,419	134,875,543	RGD:5509061	MGI
G	Chd4	chromodomain helicase DNA binding protein 4		IAGP	6	125,046,181	125,080,532	RGD:5509061	MGI
G	Col10a1	collagen, type X, alpha 1		IAGP	10	34,109,787	34,116,891	RGD:5509061	MGI
G	Cops5	COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)		IAGP	1	10,014,911	10,027,979	RGD:5509061	MGI
G	Cpa3	carboxypeptidase A3, mast cell		IAGP	3	20,115,515	20,142,080	RGD:5509061	MGI
G	Crebbp	CREB binding protein		IAGP	16	4,084,048	4,213,404	RGD:5509061	MGI
G	Crebbp	CREB binding protein		IAGP	16	4,084,048	4,213,404	RGD:5509061	MGI
G	Ctcf	CCCTC-binding factor		IAGP	8	108,160,438	108,206,822	RGD:5509061	MGI
G	Ctla4	cytotoxic T-lymphocyte-associated protein 4		IAGP	1	60,965,869	60,972,674	RGD:5509061	MGI
G	Ctla4	cytotoxic T-lymphocyte-associated protein 4		IAGP	1	60,965,869	60,972,674	RGD:5509061	MGI
G	Ctsd	cathepsin D		IAGP	7	149,561,821	149,573,775	RGD:5509061	MGI
G	Cux1	cut-like homeobox 1		IAGP	5	136,724,005	137,043,301	RGD:5509061	MGI
G	Cxcr4	chemokine (C-X-C motif) receptor 4		IAGP	1	130,484,776	130,488,876	RGD:5509061	MGI
G	Dck	deoxycytidine kinase		IAGP	5	89,194,038	89,212,302	RGD:5509061	MGI
G	Dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)		IAGP	2	3,341,403	3,378,385	RGD:5509061	MGI
G	Dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)		IAGP	2	3,341,403	3,378,385	RGD:5509061	MGI
G	Dffb	DNA fragmentation factor, beta subunit		IAGP	4	153,338,558	153,349,190	RGD:5509061	MGI
G	Dll4	delta-like 4 (Drosophila)		IAGP	2	119,151,520	119,161,402	RGD:5509061	MGI
G	Dll4	delta-like 4 (Drosophila)		IAGP	2	119,151,520	119,161,402	RGD:5509061	MGI
G	Dnase2a	deoxyribonuclease II alpha		IAGP	8	87,432,523	87,435,360	RGD:5509061	MGI
G	Dnmt3b	DNA methyltransferase 3B		IAGP	2	153,475,190	153,513,466	RGD:5509061	MGI
G	Dock2	dedicator of cyto-kinesis 2		IAGP	11	34,126,864	34,414,545	RGD:5509061	MGI
G	E2f1	E2F transcription factor 1		IAGP	2	154,385,375	154,395,588	RGD:5509061	MGI
G	E2f4	E2F transcription factor 4		IAGP	8	107,821,563	107,829,270	RGD:5509061	MGI
G	E2f6	E2F transcription factor 6		IAGP	12	16,817,771	16,833,558	RGD:5509061	MGI
G	Efnb1	ephrin B1		IAGP	X	96,331,469	96,344,330	RGD:5509061	MGI
G	Efnb2	ephrin B2		IAGP	8	8,617,439	8,660,773	RGD:5509061	MGI
G	Elavl1	ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)		IAGP	8	4,284,782	4,325,100	RGD:5509061	MGI
G	Ep300	E1A binding protein p300		IAGP	15	81,416,644	81,482,507	RGD:5509061	MGI
G	Ezh2	enhancer of zeste homolog 2 (Drosophila)		IAGP	6	47,480,273	47,545,029	RGD:5509061	MGI
G	Fadd	Fas (TNFRSF6)-associated via death domain		IAGP	7	151,764,228	151,768,341	RGD:5509061	MGI
G	Fos	FBJ osteosarcoma oncogene		IAGP	12	86,814,851	86,818,219	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxo1	forkhead box O1		IAGP	3	52,072,259	52,154,031	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	Gata3	GATA binding protein 3		IAGP	2	9,778,705	9,800,227	RGD:5509061	MGI
G	Gba	glucosidase, beta, acid		IAGP	3	89,006,850	89,012,603	RGD:5509061	MGI
G	Gmnn	geminin		IAGP	13	24,843,714	24,853,806	RGD:5509061	MGI
G	Grb2	growth factor receptor bound protein 2		IAGP	11	115,505,444	115,569,911	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Hax1	HCLS1 associated X-1		IAGP	3	89,799,379	89,802,608	RGD:5509061	MGI
G	Hax1	HCLS1 associated X-1		IAGP	3	89,799,379	89,802,608	RGD:5509061	MGI
G	Hcls1	hematopoietic cell specific Lyn substrate 1		IAGP	16	36,935,069	36,963,300	RGD:5509061	MGI
G	Hdac1	histone deacetylase 1		IAGP	4	129,193,348	129,219,890	RGD:5509061	MGI
G	Hdac2	histone deacetylase 2		IAGP	10	36,694,350	36,721,694	RGD:5509061	MGI
G	Hes1	hairy and enhancer of split 1 (Drosophila)		IAGP	16	30,065,443	30,067,882	RGD:5509061	MGI
G	Hivep3	human immunodeficiency virus type I enhancer binding protein 3		IAGP	4	119,487,283	119,808,016	RGD:5509061	MGI
G	Hnrnpl	heterogeneous nuclear ribonucleoprotein L		IAGP	7	29,595,909	29,607,285	RGD:5509061	MGI
G	Htra2	HtrA serine peptidase 2		IAGP	6	83,001,260	83,004,565	RGD:5509061	MGI
G	Igh	immunoglobulin heavy chain complex		IAGP	12	114,496,979	117,248,165	RGD:5509061	MGI
G	Ikzf1	IKAROS family zinc finger 1		IAGP	11	11,586,216	11,672,929	RGD:5509061	MGI
G	Ikzf1	IKAROS family zinc finger 1		IAGP	11	11,586,216	11,672,929	RGD:5509061	MGI
G	Ikzf1	IKAROS family zinc finger 1		IAGP	11	11,586,216	11,672,929	RGD:5509061	MGI
G	Il2	interleukin 2		IAGP	3	37,019,635	37,024,876	RGD:5509061	MGI
G	Il2rb	interleukin 2 receptor, beta chain		IAGP	15	78,310,978	78,325,496	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il6st	interleukin 6 signal transducer		IAGP	13	113,254,278	113,297,068	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Itgb2	integrin beta 2		IAGP	10	76,993,093	77,028,419	RGD:5509061	MGI
G	Itk	IL2 inducible T cell kinase		IAGP	11	46,138,652	46,203,017	RGD:5509061	MGI
G	Kit	kit oncogene		IAGP	5	75,971,012	76,052,747	RGD:5509061	MGI
G	Kitl	kit ligand		IAGP	10	99,478,458	99,563,046	RGD:5509061	MGI
G	Kmt2e	lysine (K)-specific methyltransferase 2E		IAGP	5	22,940,247	23,010,047	RGD:5509061	MGI
G	Lama2	laminin, alpha 2		IAGP	10	26,701,091	27,336,748	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lcp2	lymphocyte cytosolic protein 2		IAGP	11	33,947,201	33,992,280	RGD:5509061	MGI
G	Lcp2	lymphocyte cytosolic protein 2		IAGP	11	33,947,201	33,992,280	RGD:5509061	MGI
G	Lig4	ligase IV, DNA, ATP-dependent		IAGP	8	9,970,020	9,976,323	RGD:5509061	MGI
G	Map3k3	mitogen-activated protein kinase kinase kinase 3		IAGP	11	105,946,216	106,016,760	RGD:5509061	MGI
G	Mapk1	mitogen-activated protein kinase 1		IAGP	16	16,983,475	17,047,546	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mdm2	transformed mouse 3T3 cell double minute 2		IAGP	10	117,125,961	117,147,772	RGD:5509061	MGI
G	Mertk	c-mer proto-oncogene tyrosine kinase		IAGP	2	128,524,733	128,627,923	RGD:5509061	MGI
G	Msi2	musashi RNA-binding protein 2		IAGP	11	88,152,884	88,403,661	RGD:5509061	MGI
G	Mtor	mechanistic target of rapamycin (serine/threonine kinase)		IAGP	4	147,822,691	147,931,794	RGD:5509061	MGI
G	Myb	myeloblastosis oncogene		IAGP	10	20,844,736	20,880,790	RGD:5509061	MGI
G	Myb	myeloblastosis oncogene		IAGP	10	20,844,736	20,880,790	RGD:5509061	MGI
G	Ncaph2	non-SMC condensin II complex, subunit H2		IAGP	15	89,186,153	89,203,259	RGD:5509061	MGI
G	Nfatc1	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1		IAGP	18	80,802,944	80,909,810	RGD:5509061	MGI
G	Nfatc3	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3		IAGP	8	108,583,503	108,654,437	RGD:5509061	MGI
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105		IAGP	3	135,247,619	135,354,511	RGD:5509061	MGI
G	Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100		IAGP	19	46,379,227	46,386,580	RGD:5509061	MGI
G	Nfkb2	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100		IAGP	19	46,379,227	46,386,580	RGD:5509061	MGI
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha		IAGP	12	56,590,396	56,593,634	RGD:5509061	MGI
G	Nkap	NFKB activating protein		IAGP	X	34,666,758	34,690,741	RGD:5509061	MGI
G	Nlk	nemo like kinase		IAGP	11	78,380,670	78,510,927	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Nr3c1	nuclear receptor subfamily 3, group C, member 1		IAGP	18	39,570,199	39,646,899	RGD:5509061	MGI
G	Ogt	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)		IAGP	X	98,835,403	98,879,690	RGD:5509061	MGI
G	Parl	presenilin associated, rhomboid-like		IAGP	16	20,279,893	20,302,435	RGD:5509061	MGI
G	Pax1	paired box gene 1		IAGP	2	147,190,730	147,200,785	RGD:5509061	MGI
G	Pik3cd	phosphatidylinositol 3-kinase catalytic delta polypeptide		IAGP	4	149,023,277	149,075,738	RGD:5509061	MGI
G	Pik3cg	phosphoinositide-3-kinase, catalytic, gamma polypeptide		IAGP	12	32,858,262	32,893,514	RGD:5509061	MGI
G	Pla2g6	phospholipase A2, group VI		IAGP	15	79,116,658	79,158,598	RGD:5509061	MGI
G	Pnp	purine-nucleoside phosphorylase		IAGP	14	51,563,978	51,573,087	RGD:5509061	MGI
G	Pnp	purine-nucleoside phosphorylase		IAGP	14	51,563,978	51,573,087	RGD:5509061	MGI
G	Ppp4c	protein phosphatase 4, catalytic subunit		IAGP	7	133,929,382	133,935,985	RGD:5509061	MGI
G	Prkch	protein kinase C, eta		IAGP	12	74,686,028	74,879,172	RGD:5509061	MGI
G	Prkcq	protein kinase C, theta		IAGP	2	11,094,009	11,222,853	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Prnp	prion protein		IAGP	2	131,735,664	131,764,167	RGD:5509061	MGI
G	Prss16	protease, serine, 16 (thymus)		IAGP	13	22,094,045	22,101,610	RGD:5509061	MGI
G	Psme3	proteaseome (prosome, macropain) 28 subunit, 3		IAGP	11	101,177,565	101,184,845	RGD:5509061	MGI
G	Ptch1	patched homolog 1		IAGP	13	63,612,841	63,666,828	RGD:5509061	MGI
G	Ptcra	pre T cell antigen receptor alpha		IAGP	17	46,892,612	46,900,661	RGD:5509061	MGI
G	Ptcra	pre T cell antigen receptor alpha		IAGP	17	46,892,612	46,900,661	RGD:5509061	MGI
G	Ptk2	PTK2 protein tyrosine kinase 2		IAGP	15	73,035,535	73,253,621	RGD:5509061	MGI
G	Ptpn2	protein tyrosine phosphatase, non-receptor type 2		IAGP	18	67,825,155	67,884,275	RGD:5509061	MGI
G	Ptpn2	protein tyrosine phosphatase, non-receptor type 2		IAGP	18	67,825,155	67,884,275	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Rad21	RAD21 homolog (S. pombe)		IAGP	15	51,794,150	51,823,306	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rb1	retinoblastoma 1		IAGP	14	73,595,309	73,725,598	RGD:5509061	MGI
G	Rbpj	recombination signal binding protein for immunoglobulin kappa J region		IAGP	5	53,947,018	54,048,684	RGD:5509061	MGI
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		IAGP	19	5,637,490	5,648,130	RGD:5509061	MGI
G	Rhoh	ras homolog gene family, member H		IAGP	5	66,254,808	66,287,939	RGD:5509061	MGI
G	Rhoh	ras homolog gene family, member H		IAGP	5	66,254,808	66,287,939	RGD:5509061	MGI
G	Rictor	RPTOR independent companion of MTOR, complex 2		IAGP	15	6,658,381	6,750,401	RGD:5509061	MGI
G	Rnf8	ring finger protein 8		IAGP	17	29,751,776	29,778,604	RGD:5509061	MGI
G	Rorc	RAR-related orphan receptor gamma		IAGP	3	94,176,748	94,202,161	RGD:5509061	MGI
G	Rorc	RAR-related orphan receptor gamma		IAGP	3	94,176,748	94,202,161	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Ruvbl2	RuvB-like protein 2		IAGP	7	52,677,268	52,689,834	RGD:5509061	MGI
G	Sash3	SAM and SH3 domain containing 3		IAGP	X	45,499,704	45,514,740	RGD:5509061	MGI
G	Sfpi1	SFFV proviral integration 1		IAGP	2	90,936,954	90,955,913	RGD:5509061	MGI
G	Sgpl1	sphingosine phosphate lyase 1		IAGP	10	60,561,390	60,610,413	RGD:5509061	MGI
G	Shc1	src homology 2 domain-containing transforming protein C1		IAGP	3	89,222,473	89,233,951	RGD:5509061	MGI
G	Sirt6	sirtuin 6 (silent mating type information regulation 2, homolog) 6 (S. cerevisiae)		IAGP	10	81,084,531	81,090,353	RGD:5509061	MGI
G	Slc39a3	solute carrier family 39 (zinc transporter), member 3		IAGP	10	80,491,285	80,496,657	RGD:5509061	MGI
G	Slc46a2	solute carrier family 46, member 2		IAGP	4	59,918,771	59,927,928	RGD:5509061	MGI
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IAGP	9	21,420,613	21,508,674	RGD:5509061	MGI
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IAGP	9	21,420,613	21,508,674	RGD:5509061	MGI
G	Sos1	son of sevenless homolog 1 (Drosophila)		IAGP	17	80,793,092	80,879,793	RGD:5509061	MGI
G	Srsf2	serine/arginine-rich splicing factor 2		IAGP	11	116,711,211	116,714,408	RGD:5509061	MGI
G	St14	suppression of tumorigenicity 14 (colon carcinoma)		IAGP	9	30,896,175	30,939,384	RGD:5509061	MGI
G	Stk17b	serine/threonine kinase 17b (apoptosis-inducing)		IAGP	1	53,812,356	53,842,059	RGD:5509061	MGI
G	Supv3l1	suppressor of var1, 3-like 1 (S. cerevisiae)		IAGP	10	61,892,126	61,912,441	RGD:5509061	MGI
G	Suv420h1	suppressor of variegation 4-20 homolog 1 (Drosophila)		IAGP	19	3,767,421	3,818,303	RGD:5509061	MGI
G	Suv420h2	suppressor of variegation 4-20 homolog 2 (Drosophila)		IAGP	7	4,691,729	4,699,116	RGD:5509061	MGI
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IAGP	18	37,800,145	37,803,858	RGD:5509061	MGI
G	Tasp1	taspase, threonine aspartase 1		IAGP	2	139,659,216	139,892,521	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
G	Tcf3	transcription factor 3		IAGP	10	79,871,910	79,896,398	RGD:5509061	MGI
G	Tcf3	transcription factor 3		IAGP	10	79,871,910	79,896,398	RGD:5509061	MGI
G	Tcf4	transcription factor 4		IAGP	18	69,504,146	69,847,621	RGD:5509061	MGI
G	Tcf7	transcription factor 7, T cell specific		IAGP	11	52,066,106	52,096,073	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcrb	T cell receptor beta chain		IAGP	6	40,841,295	41,508,370	RGD:5509061	MGI
G	Tcrb	T cell receptor beta chain		IAGP	6	40,841,295	41,508,370	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
G	Tpp2	tripeptidyl peptidase II		IAGP	1	43,990,852	44,059,816	RGD:5509061	MGI
G	Traf2	TNF receptor-associated factor 2		IAGP	2	25,373,502	25,402,414	RGD:5509061	MGI
G	Traf3	TNF receptor-associated factor 3		IAGP	12	112,404,759	112,505,359	RGD:5509061	MGI
G	Twsg1	twisted gastrulation homolog 1 (Drosophila)		IAGP	17	66,272,405	66,300,527	RGD:5509061	MGI
G	Upf2	UPF2 regulator of nonsense transcripts homolog (yeast)		IAGP	2	5,872,515	5,977,749	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav2	vav 2 oncogene		IAGP	2	27,119,155	27,282,345	RGD:5509061	MGI
G	Vav3	vav 3 oncogene		IAGP	3	109,143,601	109,488,612	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Xist	inactive X specific transcripts		IAGP	X	100,655,712	100,678,572	RGD:5509061	MGI
G	Zbtb1	zinc finger and BTB domain containing 1		IAGP	12	77,471,253	77,489,734	RGD:5509061	MGI
G	Zeb1	zinc finger E-box binding homeobox 1		IAGP	18	5,591,889	5,774,909	RGD:5509061	MGI
G	Zeb1	zinc finger E-box binding homeobox 1		IAGP	18	5,591,889	5,774,909	RGD:5509061	MGI
decreased memory T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Batf3	basic leucine zipper transcription factor, ATF-like 3		IAGP	1	192,922,293	192,932,822	RGD:5509061	MGI
G	Bcl6b	B cell CLL/lymphoma 6, member B		IAGP	11	70,037,629	70,043,300	RGD:5509061	MGI
G	Card11	caspase recruitment domain family, member 11		IAGP	5	141,348,953	141,476,550	RGD:5509061	MGI
G	Coro1a	coronin, actin binding protein 1A		IAGP	7	133,843,288	133,848,268	RGD:5509061	MGI
G	Eomes	eomesodermin homolog (Xenopus laevis)		IAGP	9	118,387,307	118,395,250	RGD:5509061	MGI
G	Eomes	eomesodermin homolog (Xenopus laevis)		IAGP	9	118,387,307	118,395,250	RGD:5509061	MGI
G	Eomes	eomesodermin homolog (Xenopus laevis)		IAGP	9	118,387,307	118,395,250	RGD:5509061	MGI
G	Ets1	E26 avian leukemia oncogene 1, 5' domain		IAGP	9	32,503,627	32,565,405	RGD:5509061	MGI
G	Gmnn	geminin		IAGP	13	24,843,714	24,853,806	RGD:5509061	MGI
G	Ikbkb	inhibitor of kappaB kinase beta		IAGP	8	23,769,677	23,817,055	RGD:5509061	MGI
G	Il15	interleukin 15		IAGP	8	84,855,523	84,926,444	RGD:5509061	MGI
G	Il15ra	interleukin 15 receptor, alpha chain		IAGP	2	11,627,163	11,655,589	RGD:5509061	MGI
G	Il15ra	interleukin 15 receptor, alpha chain		IAGP	2	11,627,163	11,655,589	RGD:5509061	MGI
G	Il15ra	interleukin 15 receptor, alpha chain		IAGP	2	11,627,163	11,655,589	RGD:5509061	MGI
G	Il2rb	interleukin 2 receptor, beta chain		IAGP	15	78,310,978	78,325,496	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Lyz2	lysozyme 2		IAGP	10	116,714,597	116,719,328	RGD:5509061	MGI
G	Myc	myelocytomatosis oncogene		IAGP	15	61,816,896	61,821,916	RGD:5509061	MGI
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105		IAGP	3	135,247,619	135,354,511	RGD:5509061	MGI
G	Rras2	related RAS viral (r-ras) oncogene homolog 2		IAGP	7	121,190,296	121,261,295	RGD:5509061	MGI
G	Tbx21	T-box 21		IAGP	11	96,959,321	96,976,645	RGD:5509061	MGI
G	Tbx21	T-box 21		IAGP	11	96,959,321	96,976,645	RGD:5509061	MGI
G	Tbx21	T-box 21		IAGP	11	96,959,321	96,976,645	RGD:5509061	MGI
G	Tnfsf13b	tumor necrosis factor (ligand) superfamily, member 13b		IAGP	8	10,006,633	10,036,000	RGD:5509061	MGI
decreased NK T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Aire	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)		IAGP	10	77,492,776	77,506,325	RGD:5509061	MGI
G	Apc	adenomatosis polyposis coli		IAGP	18	34,380,638	34,481,844	RGD:5509061	MGI
G	Atf2	activating transcription factor 2		IAGP	2	73,654,578	73,730,685	RGD:5509061	MGI
G	Card11	caspase recruitment domain family, member 11		IAGP	5	141,348,953	141,476,550	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd1d2	CD1d2 antigen		IAGP	3	86,790,508	86,793,455	RGD:5509061	MGI
G	Cd1d2	CD1d2 antigen		IAGP	3	86,790,508	86,793,455	RGD:5509061	MGI
G	Cd1d2	CD1d2 antigen		IAGP	3	86,790,508	86,793,455	RGD:5509061	MGI
G	Cd1d2	CD1d2 antigen		IAGP	3	86,790,508	86,793,455	RGD:5509061	MGI
G	Cd1d2	CD1d2 antigen		IAGP	3	86,790,508	86,793,455	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cxcl16	chemokine (C-X-C motif) ligand 16		IAGP	11	70,267,736	70,273,486	RGD:5509061	MGI
G	Elf4	E74-like factor 4 (ets domain transcription factor)		IAGP	X	45,764,226	45,816,309	RGD:5509061	MGI
G	Eomes	eomesodermin homolog (Xenopus laevis)		IAGP	9	118,387,307	118,395,250	RGD:5509061	MGI
G	Gimap5	GTPase, IMAP family member 5		IAGP	6	48,696,196	48,704,199	RGD:5509061	MGI
G	Gimap5	GTPase, IMAP family member 5		IAGP	6	48,696,196	48,704,199	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Ikbkg	inhibitor of kappaB kinase gamma		IAGP	X	71,638,630	71,699,117	RGD:5509061	MGI
G	Il15	interleukin 15		IAGP	8	84,855,523	84,926,444	RGD:5509061	MGI
G	Il15ra	interleukin 15 receptor, alpha chain		IAGP	2	11,627,163	11,655,589	RGD:5509061	MGI
G	Il15ra	interleukin 15 receptor, alpha chain		IAGP	2	11,627,163	11,655,589	RGD:5509061	MGI
G	Il17rb	interleukin 17 receptor B		IAGP	14	30,809,354	30,822,082	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il7	interleukin 7		IAGP	3	7,572,077	7,613,427	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Itk	IL2 inducible T cell kinase		IAGP	11	46,138,652	46,203,017	RGD:5509061	MGI
G	Kmt2e	lysine (K)-specific methyltransferase 2E		IAGP	5	22,940,247	23,010,047	RGD:5509061	MGI
G	Lcp2	lymphocyte cytosolic protein 2		IAGP	11	33,947,201	33,992,280	RGD:5509061	MGI
G	Map3k14	mitogen-activated protein kinase kinase kinase 14		IAGP	11	103,081,078	103,128,715	RGD:5509061	MGI
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105		IAGP	3	135,247,619	135,354,511	RGD:5509061	MGI
G	Nhej1	nonhomologous end-joining factor 1		IAGP	1	75,013,920	75,093,227	RGD:5509061	MGI
G	Pcsk1	proprotein convertase subtilisin/kexin type 1		IAGP	13	75,227,435	75,269,946	RGD:5509061	MGI
G	Pdpk1	3-phosphoinositide dependent protein kinase 1		IAGP	17	24,210,647	24,278,561	RGD:5509061	MGI
G	Prkcq	protein kinase C, theta		IAGP	2	11,094,009	11,222,853	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Relb	avian reticuloendotheliosis viral (v-rel) oncogene related B		IAGP	7	20,191,571	20,214,787	RGD:5509061	MGI
G	Sh2d1a	SH2 domain protein 1A		IAGP	X	39,855,785	39,875,252	RGD:5509061	MGI
G	Sh2d1a	SH2 domain protein 1A		IAGP	X	39,855,785	39,875,252	RGD:5509061	MGI
G	Sh2d1a	SH2 domain protein 1A		IAGP	X	39,855,785	39,875,252	RGD:5509061	MGI
G	Tbk1	TANK-binding kinase 1		IAGP	10	120,983,511	121,023,850	RGD:5509061	MGI
G	Tbx21	T-box 21		IAGP	11	96,959,321	96,976,645	RGD:5509061	MGI
G	Tcf3	transcription factor 3		IAGP	10	79,871,910	79,896,398	RGD:5509061	MGI
G	Tox	thymocyte selection-associated high mobility group box		IAGP	4	6,614,533	6,917,870	RGD:5509061	MGI
G	Trp53	transformation related protein 53		IAGP	11	69,393,861	69,405,375	RGD:5509061	MGI
G	Txnip	thioredoxin interacting protein		IAGP	3	96,361,880	96,365,780	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Zfp683	zinc finger protein 683		IAGP	4	133,607,109	133,614,855	RGD:5509061	MGI
Q	Idd4_m	insulin dependent diabetes susceptibility 4 (mouse)		IAGP	11	57,677,336	91,677,434	RGD:5509061	MGI
decreased regulatory T cell number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Aire	autoimmune regulator (autoimmune polyendocrinopathy candidiasis ectodermal dystrophy)		IAGP	10	77,492,776	77,506,325	RGD:5509061	MGI
G	Card11	caspase recruitment domain family, member 11		IAGP	5	141,348,953	141,476,550	RGD:5509061	MGI
G	Cd1d1	CD1d1 antigen		IAGP	3	86,799,756	86,803,262	RGD:5509061	MGI
G	Cd28	CD28 antigen		IAGP	1	60,803,232	60,830,203	RGD:5509061	MGI
G	Cd28	CD28 antigen		IAGP	1	60,803,232	60,830,203	RGD:5509061	MGI
G	Cd28	CD28 antigen		IAGP	1	60,803,232	60,830,203	RGD:5509061	MGI
G	Cd80	CD80 antigen		IAGP	16	38,459,013	38,487,015	RGD:5509061	MGI
G	Cd86	CD86 antigen		IAGP	16	36,603,955	36,666,163	RGD:5509061	MGI
G	Cd86	CD86 antigen		IAGP	16	36,603,955	36,666,163	RGD:5509061	MGI
G	Dicer1	dicer 1, ribonuclease type III		IAGP	12	105,925,952	105,990,162	RGD:5509061	MGI
G	Dicer1	dicer 1, ribonuclease type III		IAGP	12	105,925,952	105,990,162	RGD:5509061	MGI
G	E2f1	E2F transcription factor 1		IAGP	2	154,385,375	154,395,588	RGD:5509061	MGI
G	Fads1	fatty acid desaturase 1		IAGP	19	10,257,378	10,271,364	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Ier3	immediate early response 3		IAGP	17	35,958,658	35,959,856	RGD:5509061	MGI
G	Ikbkb	inhibitor of kappaB kinase beta		IAGP	8	23,769,677	23,817,055	RGD:5509061	MGI
G	Ikbkg	inhibitor of kappaB kinase gamma		IEA	X	71,638,630	71,699,117	RGD:5509061	MGI
G	Il2	interleukin 2		IAGP	3	37,019,635	37,024,876	RGD:5509061	MGI
G	Il2	interleukin 2		IAGP	3	37,019,635	37,024,876	RGD:5509061	MGI
G	Il2ra	interleukin 2 receptor, alpha chain		IAGP	2	11,564,419	11,614,821	RGD:5509061	MGI
G	Il2rb	interleukin 2 receptor, beta chain		IAGP	15	78,310,978	78,325,496	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Itgav	integrin alpha V		IAGP	2	83,564,554	83,647,073	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lgals9	lectin, galactose binding, soluble 9		IAGP	11	78,776,481	78,798,426	RGD:5509061	MGI
G	Map3k14	mitogen-activated protein kinase kinase kinase 14		IAGP	11	103,081,078	103,128,715	RGD:5509061	MGI
G	Mir155	microRNA 155		IAGP	16	84,714,385	84,714,449	RGD:5509061	MGI
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105		IAGP	3	135,247,619	135,354,511	RGD:5509061	MGI
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha		IAGP	12	56,590,396	56,593,634	RGD:5509061	MGI
G	Pdcd1	programmed cell death 1		IAGP	1	95,934,882	95,949,130	RGD:5509061	MGI
G	Plcg1	phospholipase C, gamma 1		IAGP	2	160,557,046	160,601,496	RGD:5509061	MGI
G	Stim1	stromal interaction molecule 1		IAGP	7	109,416,338	109,585,374	RGD:5509061	MGI
G	Stim2	stromal interaction molecule 2		IAGP	5	54,389,762	54,512,296	RGD:5509061	MGI
G	Tespa1	thymocyte expressed, positive selection associated 1		IAGP	10	129,759,908	129,799,698	RGD:5509061	MGI
G	Thbs1	thrombospondin 1		IAGP	2	117,937,658	117,952,869	RGD:5509061	MGI
G	Themis	thymocyte selection associated		IAGP	10	28,388,201	28,602,555	RGD:5509061	MGI
G	Themis	thymocyte selection associated		IAGP	10	28,388,201	28,602,555	RGD:5509061	MGI
G	Tnfrsf4	tumor necrosis factor receptor superfamily, member 4		IAGP	4	155,387,804	155,390,698	RGD:5509061	MGI
G	Usp17lc	ubiquitin specific peptidase 17-like C		IAGP	7	110,565,210	110,567,688	RGD:5509061	MGI
G	Vdr	vitamin D receptor		IAGP	15	97,684,858	97,738,727	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Wasl	Wiskott-Aldrich syndrome-like (human)		IAGP	6	24,563,810	24,614,995	RGD:5509061	MGI
G	Xcl1	chemokine (C motif) ligand 1		IAGP	1	166,861,779	166,865,641	RGD:5509061	MGI
G	Zap70	zeta-chain (TCR) associated protein kinase		IAGP	1	36,818,706	36,839,661	RGD:5509061	MGI
decreased thymocyte number
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Abl1	c-abl oncogene 1, non-receptor tyrosine kinase		IAGP	2	31,544,076	31,659,747	RGD:5509061	MGI
G	Abl1	c-abl oncogene 1, non-receptor tyrosine kinase		IAGP	2	31,544,076	31,659,747	RGD:5509061	MGI
G	Apc	adenomatosis polyposis coli		IAGP	18	34,380,638	34,481,844	RGD:5509061	MGI
G	Apex2	apurinic/apyrimidinic endonuclease 2		IAGP	X	147,006,050	147,022,692	RGD:5509061	MGI
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Atm	ataxia telangiectasia mutated homolog (human)		IAGP	9	53,245,227	53,344,776	RGD:5509061	MGI
G	Atr	ataxia telangiectasia and Rad3 related		IAGP	9	95,758,016	95,852,063	RGD:5509061	MGI
G	Bbc3	BCL2 binding component 3		IAGP	7	16,894,932	16,903,683	RGD:5509061	MGI
G	Bcl10	B cell leukemia/lymphoma 10		IAGP	3	145,587,342	145,597,247	RGD:5509061	MGI
G	Bcl2	B cell leukemia/lymphoma 2		IAGP	1	108,434,756	108,610,867	RGD:5509061	MGI
G	Birc5	baculoviral IAP repeat-containing 5		IAGP	11	117,710,551	117,717,057	RGD:5509061	MGI
G	Bmi1	Bmi1 polycomb ring finger oncogene		IAGP	2	18,598,645	18,608,256	RGD:5509061	MGI
G	Braf	Braf transforming gene		IAGP	6	39,553,236	39,675,462	RGD:5509061	MGI
G	Brca1	breast cancer 1		IAGP	11	101,350,078	101,413,269	RGD:5509061	MGI
G	Cacybp	calcyclin binding protein		IAGP	1	162,133,052	162,142,908	RGD:5509061	MGI
G	Caml	calcium modulating ligand		IAGP	13	55,724,366	55,733,777	RGD:5509061	MGI
G	Casp3	caspase 3		IAGP	8	47,702,803	47,724,071	RGD:5509061	MGI
G	Cbfb	core binding factor beta		IAGP	8	107,694,574	107,741,889	RGD:5509061	MGI
G	Ccr9	chemokine (C-C motif) receptor 9		IAGP	9	123,676,329	123,692,575	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd247	CD247 antigen		IAGP	1	167,718,820	167,804,117	RGD:5509061	MGI
G	Cd3g	CD3 antigen, gamma polypeptide		IAGP	9	44,777,655	44,788,514	RGD:5509061	MGI
G	Cd3g	CD3 antigen, gamma polypeptide		IAGP	9	44,777,655	44,788,514	RGD:5509061	MGI
G	Cd5l	CD5 antigen-like		IAGP	3	87,161,803	87,174,996	RGD:5509061	MGI
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Cdk6	cyclin-dependent kinase 6		IAGP	5	3,344,312	3,522,225	RGD:5509061	MGI
G	Cdkn1a	cyclin-dependent kinase inhibitor 1A (P21)		IAGP	17	29,227,931	29,237,667	RGD:5509061	MGI
G	Col10a1	collagen, type X, alpha 1		IAGP	10	34,109,787	34,116,891	RGD:5509061	MGI
G	Cops5	COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)		IAGP	1	10,014,911	10,027,979	RGD:5509061	MGI
G	Coro1a	coronin, actin binding protein 1A		IAGP	7	133,843,288	133,848,268	RGD:5509061	MGI
G	Crebbp	CREB binding protein		IAGP	16	4,084,048	4,213,404	RGD:5509061	MGI
G	Crebbp	CREB binding protein		IAGP	16	4,084,048	4,213,404	RGD:5509061	MGI
G	Crip3	cysteine-rich protein 3		IAGP	17	46,565,891	46,568,720	RGD:5509061	MGI
G	Cux1	cut-like homeobox 1		IAGP	5	136,724,005	137,043,301	RGD:5509061	MGI
G	Cxcr4	chemokine (C-X-C motif) receptor 4		IAGP	1	130,484,776	130,488,876	RGD:5509061	MGI
G	Dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)		IAGP	2	3,341,403	3,378,385	RGD:5509061	MGI
G	Dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)		IAGP	2	3,341,403	3,378,385	RGD:5509061	MGI
G	Dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)		IAGP	2	3,341,403	3,378,385	RGD:5509061	MGI
G	Dclre1c	DNA cross-link repair 1C, PSO2 homolog (S. cerevisiae)		IAGP	2	3,341,403	3,378,385	RGD:5509061	MGI
G	Dicer1	dicer 1, ribonuclease type III		IAGP	12	105,925,952	105,990,162	RGD:5509061	MGI
G	Dll4	delta-like 4 (Drosophila)		IAGP	2	119,151,520	119,161,402	RGD:5509061	MGI
G	Dmtf1	cyclin D binding myb-like transcription factor 1		IAGP	5	9,118,868	9,161,776	RGD:5509061	MGI
G	Dnmt3b	DNA methyltransferase 3B		IAGP	2	153,475,190	153,513,466	RGD:5509061	MGI
G	E2f4	E2F transcription factor 4		IAGP	8	107,821,563	107,829,270	RGD:5509061	MGI
G	Elk4	ELK4, member of ETS oncogene family		IAGP	1	133,904,182	133,922,261	RGD:5509061	MGI
G	Ep300	E1A binding protein p300		IAGP	15	81,416,644	81,482,507	RGD:5509061	MGI
G	Ep300	E1A binding protein p300		IAGP	15	81,416,644	81,482,507	RGD:5509061	MGI
G	Esr1	estrogen receptor 1 (alpha)		IAGP	10	5,342,780	5,734,495	RGD:5509061	MGI
G	Ets1	E26 avian leukemia oncogene 1, 5' domain		IAGP	9	32,503,627	32,565,405	RGD:5509061	MGI
G	Ezh2	enhancer of zeste homolog 2 (Drosophila)		IAGP	6	47,480,273	47,545,029	RGD:5509061	MGI
G	Fcer1g	Fc receptor, IgE, high affinity I, gamma polypeptide		IAGP	1	173,159,703	173,164,480	RGD:5509061	MGI
G	Fli1	Friend leukemia integration 1		IAGP	9	32,229,793	32,348,953	RGD:5509061	MGI
G	Fos	FBJ osteosarcoma oncogene		IAGP	12	86,814,851	86,818,219	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxn1	forkhead box N1		IAGP	11	78,171,790	78,200,060	RGD:5509061	MGI
G	Foxp3	forkhead box P3		IAGP	X	7,156,819	7,172,360	RGD:5509061	MGI
G	Fyb	FYN binding protein		IAGP	15	6,529,871	6,613,312	RGD:5509061	MGI
G	Fyn	Fyn proto-oncogene		IAGP	10	39,089,605	39,285,187	RGD:5509061	MGI
G	Gabpa	GA repeat binding protein, alpha		IAGP	16	84,835,369	84,864,024	RGD:5509061	MGI
G	Gata3	GATA binding protein 3		IAGP	2	9,778,705	9,800,227	RGD:5509061	MGI
G	Gata3	GATA binding protein 3		IAGP	2	9,778,705	9,800,227	RGD:5509061	MGI
G	Gfi1	growth factor independent 1		IAGP	5	108,145,674	108,153,363	RGD:5509061	MGI
G	Gfi1	growth factor independent 1		IAGP	5	108,145,674	108,153,363	RGD:5509061	MGI
G	Gfi1	growth factor independent 1		IAGP	5	108,145,674	108,153,363	RGD:5509061	MGI
G	Gfi1	growth factor independent 1		IAGP	5	108,145,674	108,153,363	RGD:5509061	MGI
G	Gimap5	GTPase, IMAP family member 5		IAGP	6	48,696,196	48,704,199	RGD:5509061	MGI
G	Gmnn	geminin		IAGP	13	24,843,714	24,853,806	RGD:5509061	MGI
G	Grb2	growth factor receptor bound protein 2		IAGP	11	115,505,444	115,569,911	RGD:5509061	MGI
G	Gt(ROSA)26Sor	gene trap ROSA 26, Philippe Soriano		IAGP	6	113,017,422	113,027,238	RGD:5509061	MGI
G	Hax1	HCLS1 associated X-1		IAGP	3	89,799,379	89,802,608	RGD:5509061	MGI
G	Hdac1	histone deacetylase 1		IAGP	4	129,193,348	129,219,890	RGD:5509061	MGI
G	Hdac2	histone deacetylase 2		IAGP	10	36,694,350	36,721,694	RGD:5509061	MGI
G	Igbp1	immunoglobulin (CD79A) binding protein 1		IAGP	X	97,689,630	97,711,464	RGD:5509061	MGI
G	Igbp1	immunoglobulin (CD79A) binding protein 1		IAGP	X	97,689,630	97,711,464	RGD:5509061	MGI
G	Ikzf1	IKAROS family zinc finger 1		IAGP	11	11,586,216	11,672,929	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il2rg	interleukin 2 receptor, gamma chain		IAGP	X	98,459,726	98,463,545	RGD:5509061	MGI
G	Il6st	interleukin 6 signal transducer		IAGP	13	113,254,278	113,297,068	RGD:5509061	MGI
G	Il7	interleukin 7		IAGP	3	7,572,077	7,613,427	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Il7r	interleukin 7 receptor		IAGP	15	9,435,914	9,459,631	RGD:5509061	MGI
G	Ing1	inhibitor of growth family, member 1		IAGP	8	11,556,066	11,563,250	RGD:5509061	MGI
G	Inpp5d	inositol polyphosphate-5-phosphatase D		IAGP	1	89,516,887	89,617,083	RGD:5509061	MGI
G	Itk	IL2 inducible T cell kinase		IAGP	11	46,138,652	46,203,017	RGD:5509061	MGI
G	Jak1	Janus kinase 1		IAGP	4	100,824,579	100,937,887	RGD:5509061	MGI
G	Jak3	Janus kinase 3		IAGP	8	74,200,473	74,214,473	RGD:5509061	MGI
G	Jak3	Janus kinase 3		IAGP	8	74,200,473	74,214,473	RGD:5509061	MGI
G	Kifap3	kinesin-associated protein 3		IAGP	1	165,709,810	165,847,231	RGD:5509061	MGI
G	Kit	kit oncogene		IAGP	5	75,971,012	76,052,747	RGD:5509061	MGI
G	Kitl	kit ligand		IAGP	10	99,478,458	99,563,046	RGD:5509061	MGI
G	Klf13	Kruppel-like factor 13		IAGP	7	71,031,237	71,083,801	RGD:5509061	MGI
G	Kmt2e	lysine (K)-specific methyltransferase 2E		IAGP	5	22,940,247	23,010,047	RGD:5509061	MGI
G	Lair1	leukocyte-associated Ig-like receptor 1		IAGP	7	3,958,675	4,014,806	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lat	linker for activation of T cells		IAGP	7	133,507,341	133,513,048	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lck	lymphocyte protein tyrosine kinase		IAGP	4	129,225,588	129,250,885	RGD:5509061	MGI
G	Lcp2	lymphocyte cytosolic protein 2		IAGP	11	33,947,201	33,992,280	RGD:5509061	MGI
G	Lig4	ligase IV, DNA, ATP-dependent		IAGP	8	9,970,020	9,976,323	RGD:5509061	MGI
G	Lig4	ligase IV, DNA, ATP-dependent		IAGP	8	9,970,020	9,976,323	RGD:5509061	MGI
G	Maml1	mastermind like 1 (Drosophila)		IAGP	11	50,069,136	50,105,838	RGD:5509061	MGI
G	Map3k3	mitogen-activated protein kinase kinase kinase 3		IAGP	11	105,946,216	106,016,760	RGD:5509061	MGI
G	Mapk1	mitogen-activated protein kinase 1		IAGP	16	16,983,475	17,047,546	RGD:5509061	MGI
G	Mapk3	mitogen-activated protein kinase 3		IAGP	7	133,903,140	133,909,330	RGD:5509061	MGI
G	Mcl1	myeloid cell leukemia sequence 1		IAGP	3	95,462,643	95,467,102	RGD:5509061	MGI
G	Mdm2	transformed mouse 3T3 cell double minute 2		IAGP	10	117,125,961	117,147,772	RGD:5509061	MGI
G	Mtor	mechanistic target of rapamycin (serine/threonine kinase)		IAGP	4	147,822,691	147,931,794	RGD:5509061	MGI
G	Myb	myeloblastosis oncogene		IAGP	10	20,844,736	20,880,790	RGD:5509061	MGI
G	Myb	myeloblastosis oncogene		IAGP	10	20,844,736	20,880,790	RGD:5509061	MGI
G	Myb	myeloblastosis oncogene		IAGP	10	20,844,736	20,880,790	RGD:5509061	MGI
G	Ncaph2	non-SMC condensin II complex, subunit H2		IAGP	15	89,186,153	89,203,259	RGD:5509061	MGI
G	Nfatc3	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3		IAGP	8	108,583,503	108,654,437	RGD:5509061	MGI
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha		IAGP	12	56,590,396	56,593,634	RGD:5509061	MGI
G	Nhej1	nonhomologous end-joining factor 1		IAGP	1	75,013,920	75,093,227	RGD:5509061	MGI
G	Nkap	NFKB activating protein		IAGP	X	34,666,758	34,690,741	RGD:5509061	MGI
G	Nlk	nemo like kinase		IAGP	11	78,380,670	78,510,927	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Notch1	notch 1		IAGP	2	26,313,422	26,359,342	RGD:5509061	MGI
G	Notch3	notch 3		IAGP	17	32,257,838	32,303,797	RGD:5509061	MGI
G	Ogt	O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase)		IAGP	X	98,835,403	98,879,690	RGD:5509061	MGI
G	Patz1	POZ (BTB) and AT hook containing zinc finger 1		IAGP	11	3,190,460	3,208,520	RGD:5509061	MGI
G	Pax1	paired box gene 1		IAGP	2	147,190,730	147,200,785	RGD:5509061	MGI
G	Pik3cg	phosphoinositide-3-kinase, catalytic, gamma polypeptide		IAGP	12	32,858,262	32,893,514	RGD:5509061	MGI
G	Ppp3r1	protein phosphatase 3, regulatory subunit B, alpha isoform (calcineurin B, type I)		IAGP	11	17,059,301	17,100,383	RGD:5509061	MGI
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		IAGP	16	15,637,959	15,842,332	RGD:5509061	MGI
G	Prnp	prion protein		IAGP	2	131,735,664	131,764,167	RGD:5509061	MGI
G	Ptcra	pre T cell antigen receptor alpha		IAGP	17	46,892,612	46,900,661	RGD:5509061	MGI
G	Ptcra	pre T cell antigen receptor alpha		IAGP	17	46,892,612	46,900,661	RGD:5509061	MGI
G	Ptk2	PTK2 protein tyrosine kinase 2		IAGP	15	73,035,535	73,253,621	RGD:5509061	MGI
G	Ptpn2	protein tyrosine phosphatase, non-receptor type 2		IAGP	18	67,825,155	67,884,275	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Ptprc	protein tyrosine phosphatase, receptor type, C		IAGP	1	139,959,438	140,071,882	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rag2	recombination activating gene 2		IAGP	2	101,464,905	101,472,685	RGD:5509061	MGI
G	Rasgrp1	RAS guanyl releasing protein 1		IAGP	2	117,105,729	117,168,613	RGD:5509061	MGI
G	Rassf5	Ras association (RalGDS/AF-6) domain family member 5		IAGP	1	133,072,987	133,141,755	RGD:5509061	MGI
G	Rbpj	recombination signal binding protein for immunoglobulin kappa J region		IAGP	5	53,947,018	54,048,684	RGD:5509061	MGI
G	Ripk1	receptor (TNFRSF)-interacting serine-threonine kinase 1		IAGP	13	34,094,743	34,127,039	RGD:5509061	MGI
G	Rnf8	ring finger protein 8		IAGP	17	29,751,776	29,778,604	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx1	runt related transcription factor 1		IAGP	16	92,601,711	92,826,311	RGD:5509061	MGI
G	Runx2	runt related transcription factor 2		IAGP	17	44,740,950	44,951,746	RGD:5509061	MGI
G	Satb1	special AT-rich sequence binding protein 1		IAGP	17	51,875,512	51,972,615	RGD:5509061	MGI
G	Serpini2	serine (or cysteine) peptidase inhibitor, clade I, member 2		IAGP	3	75,046,293	75,074,000	RGD:5509061	MGI
G	Sfpi1	SFFV proviral integration 1		IAGP	2	90,936,954	90,955,913	RGD:5509061	MGI
G	Sfpi1	SFFV proviral integration 1		IAGP	2	90,936,954	90,955,913	RGD:5509061	MGI
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IAGP	9	21,420,613	21,508,674	RGD:5509061	MGI
G	Socs1	suppressor of cytokine signaling 1		IAGP	16	10,783,901	10,785,629	RGD:5509061	MGI
G	Sos1	son of sevenless homolog 1 (Drosophila)		IAGP	17	80,793,092	80,879,793	RGD:5509061	MGI
G	Srf	serum response factor		IAGP	17	46,683,788	46,693,111	RGD:5509061	MGI
G	Srsf2	serine/arginine-rich splicing factor 2		IAGP	11	116,711,211	116,714,408	RGD:5509061	MGI
G	Stat3	signal transducer and activator of transcription 3		IAGP	11	100,748,124	100,800,825	RGD:5509061	MGI
G	Stat5b	signal transducer and activator of transcription 5B		IAGP	11	100,642,045	100,711,899	RGD:5509061	MGI
G	Tacc3	transforming, acidic coiled-coil containing protein 3		IAGP	5	34,000,796	34,014,847	RGD:5509061	MGI
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IAGP	18	37,800,145	37,803,858	RGD:5509061	MGI
G	Tasp1	taspase, threonine aspartase 1		IAGP	2	139,659,216	139,892,521	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
G	Tcf12	transcription factor 12		IAGP	9	71,692,059	71,959,626	RGD:5509061	MGI
G	Tcf3	transcription factor 3		IAGP	10	79,871,910	79,896,398	RGD:5509061	MGI
G	Tcf4	transcription factor 4		IAGP	18	69,504,146	69,847,621	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcra	T cell receptor alpha chain		IAGP	14	53,047,642	54,843,873	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
G	Tcrd	T cell receptor delta chain		IAGP	14	54,565,748	54,778,873	RGD:5509061	MGI
G	Themis	thymocyte selection associated		IAGP	10	28,388,201	28,602,555	RGD:5509061	MGI
G	Themis	thymocyte selection associated		IAGP	10	28,388,201	28,602,555	RGD:5509061	MGI
G	Traf2	TNF receptor-associated factor 2		IAGP	2	25,373,502	25,402,414	RGD:5509061	MGI
G	Traf3	TNF receptor-associated factor 3		IAGP	12	112,404,759	112,505,359	RGD:5509061	MGI
G	Trp53	transformation related protein 53		IAGP	11	69,393,861	69,405,375	RGD:5509061	MGI
G	Trp53	transformation related protein 53		IAGP	11	69,393,861	69,405,375	RGD:5509061	MGI
G	Trp53	transformation related protein 53		IAGP	11	69,393,861	69,405,375	RGD:5509061	MGI
G	Trpm7	transient receptor potential cation channel, subfamily M, member 7		IAGP	2	126,617,294	126,701,997	RGD:5509061	MGI
G	Twsg1	twisted gastrulation homolog 1 (Drosophila)		IAGP	17	66,272,405	66,300,527	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav1	vav 1 oncogene		IAGP	17	57,418,523	57,468,659	RGD:5509061	MGI
G	Vav2	vav 2 oncogene		IAGP	2	27,119,155	27,282,345	RGD:5509061	MGI
G	Vav3	vav 3 oncogene		IAGP	3	109,143,601	109,488,612	RGD:5509061	MGI
G	Was	Wiskott-Aldrich syndrome homolog (human)		IAGP	X	7,658,592	7,667,617	RGD:5509061	MGI
G	Wasl	Wiskott-Aldrich syndrome-like (human)		IAGP	6	24,563,810	24,614,995	RGD:5509061	MGI
G	Wipf1	WAS/WASL interacting protein family, member 1		IAGP	2	73,267,674	73,367,467	RGD:5509061	MGI
G	Wnt1	wingless-related MMTV integration site 1		IAGP	15	98,620,288	98,624,261	RGD:5509061	MGI
G	Wnt4	wingless-related MMTV integration site 4		IAGP	4	136,833,550	136,852,694	RGD:5509061	MGI
G	Xist	inactive X specific transcripts		IAGP	X	100,655,712	100,678,572	RGD:5509061	MGI
G	Zeb1	zinc finger E-box binding homeobox 1		IAGP	18	5,591,889	5,774,909	RGD:5509061	MGI
G	Zeb1	zinc finger E-box binding homeobox 1		IAGP	18	5,591,889	5,774,909	RGD:5509061	MGI

Term paths to the root

Path 1
Term	Annotations
mammalian phenotype	192063
immune system phenotype	29677
abnormal immune system morphology	15012
abnormal immune system cell morphology	10475
abnormal leukocyte morphology	10268
abnormal leukocyte cell number	6621
decreased leukocyte cell number	3990
decreased lymphocyte cell number	3417
decreased T cell number	1721
absent T cells +	111
decreased NK T cell number +	60
decreased activated T cell number	8
decreased double-negative T cell number +	103
decreased double-positive T cell number	253
decreased gamma-delta T cell number +	58
decreased memory T cell number +	27
decreased regulatory T cell number +	55
decreased single-positive T cell number +	696
decreased thymocyte number +	230
Path 2
Term	Annotations
mammalian phenotype	192063
hematopoietic system phenotype	18838
abnormal hematopoietic system morphology/development	18083
abnormal blood cell morphology/development	14052
abnormal hematopoiesis	13934
abnormal leukocyte morphology	10268
abnormal mononuclear cell morphology	9058
abnormal lymphocyte morphology	8174
abnormal lymphocyte cell number	5268
decreased lymphocyte cell number	3417
decreased T cell number	1721
absent T cells +	111
decreased NK T cell number +	60
decreased activated T cell number	8
decreased double-negative T cell number +	103
decreased double-positive T cell number	253
decreased gamma-delta T cell number +	58
decreased memory T cell number +	27
decreased regulatory T cell number +	55
decreased single-positive T cell number +	696
decreased thymocyte number +	230