ONTOLOGY REPORT - ANNOTATIONS

Term:abnormal orientation of cochlear hair cell stereociliary bundles
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Accession:MP:0004522 term browser browse the term
Definition:misorientation or rotation of inner and/or outer hair cell stereociliary bundles, resulting in defective planar cell polarity of the inner ear sensory epithelium

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abnormal orientation of cochlear hair cell stereociliary bundles term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cdh23 cadherin 23 (otocadherin) GBrowse link IAGP 10 59,766,022 60,159,238 RGD:5509061 MGI
G Dll1 delta-like 1 (Drosophila) GBrowse link IAGP 17 15,504,318 15,512,787 RGD:5509061 MGI
G Dvl2 dishevelled 2, dsh homolog (Drosophila) GBrowse link IAGP 11 69,814,128 69,823,611 RGD:5509061 MGI
G Dvl2 dishevelled 2, dsh homolog (Drosophila) GBrowse link IAGP 11 69,814,128 69,823,611 RGD:5509061 MGI
G Dvl3 dishevelled 3, dsh homolog (Drosophila) GBrowse link IAGP 16 20,517,137 20,532,260 RGD:5509061 MGI
G Eya1 eyes absent 1 homolog (Drosophila) GBrowse link IAGP 1 14,159,039 14,300,280 RGD:5509061 MGI
G Fat4 FAT tumor suppressor homolog 4 (Drosophila) GBrowse link IAGP 3 38,785,862 38,910,907 RGD:5509061 MGI
G Fat4 FAT tumor suppressor homolog 4 (Drosophila) GBrowse link IAGP 3 38,785,862 38,910,907 RGD:5509061 MGI
G Jag2 jagged 2 GBrowse link IAGP 12 114,146,801 114,167,706 RGD:5509061 MGI
G Myo7a myosin VIIA GBrowse link IAGP 7 105,199,570 105,268,003 RGD:5509061 MGI
G Myo7a myosin VIIA GBrowse link IAGP 7 105,199,570 105,268,003 RGD:5509061 MGI
G Pcdh15 protocadherin 15 GBrowse link IAGP 10 73,284,615 74,112,482 RGD:5509061 MGI
G Scrib scribbled homolog (Drosophila) GBrowse link IAGP 15 75,877,616 75,900,160 RGD:5509061 MGI
G Ush1c Usher syndrome 1C GBrowse link IAGP 7 53,450,721 53,493,860 RGD:5509061 MGI
G Ush1g Usher syndrome 1G GBrowse link IAGP 11 115,176,506 115,183,232 RGD:5509061 MGI
G Vangl1 vang-like 1 (van gogh, Drosophila) GBrowse link IAGP 3 101,960,618 102,008,616 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
abnormal orientation of inner hair cell stereociliary bundles term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cdh23 cadherin 23 (otocadherin) GBrowse link IAGP 10 59,766,022 60,159,238 RGD:5509061 MGI
G Fgfr1 fibroblast growth factor receptor 1 GBrowse link IAGP 8 26,629,244 26,686,186 RGD:5509061 MGI
G Foxg1 forkhead box G1 GBrowse link IAGP 12 50,483,870 50,487,854 RGD:5509061 MGI
G Fzd3 frizzled homolog 3 (Drosophila) GBrowse link IAGP 14 65,811,278 65,881,300 RGD:5509061 MGI
G Fzd6 frizzled homolog 6 (Drosophila) GBrowse link IAGP 15 38,837,826 38,869,738 RGD:5509061 MGI
G Jag2 jagged 2 GBrowse link IAGP 12 114,146,801 114,167,706 RGD:5509061 MGI
G Mob1a MOB kinase activator 1A GBrowse link IAGP 6 83,276,033 83,290,943 RGD:5509061 MGI
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 GBrowse link IAGP 13 78,328,234 78,338,243 RGD:5509061 MGI
G Pcdh15 protocadherin 15 GBrowse link IAGP 10 73,284,615 74,112,482 RGD:5509061 MGI
G Ptk7 PTK7 protein tyrosine kinase 7 GBrowse link IAGP 17 46,701,400 46,766,453 RGD:5509061 MGI
G Ptprq protein tyrosine phosphatase, receptor type, Q GBrowse link IAGP 10 106,954,416 107,157,083 RGD:5509061 MGI
G Ush1c Usher syndrome 1C GBrowse link IAGP 7 53,450,721 53,493,860 RGD:5509061 MGI
G Vangl1 vang-like 1 (van gogh, Drosophila) GBrowse link IAGP 3 101,960,618 102,008,616 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
abnormal orientation of outer hair cell stereociliary bundles term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bbs1 Bardet-Biedl syndrome 1 (human) GBrowse link IAGP 19 4,886,882 4,906,627 RGD:5509061 MGI
G Bbs4 Bardet-Biedl syndrome 4 (human) GBrowse link IAGP 9 59,169,773 59,201,315 RGD:5509061 MGI
G Cdh23 cadherin 23 (otocadherin) GBrowse link IAGP 10 59,766,022 60,159,238 RGD:5509061 MGI
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila) GBrowse link IAGP 15 85,729,188 85,864,207 RGD:5509061 MGI
G Clrn1 clarin 1 GBrowse link IAGP 3 58,649,137 58,689,134 RGD:5509061 MGI
G Dvl1 dishevelled, dsh homolog 1 (Drosophila) GBrowse link IAGP 4 155,221,521 155,233,412 RGD:5509061 MGI
G Dvl1 dishevelled, dsh homolog 1 (Drosophila) GBrowse link IAGP 4 155,221,521 155,233,412 RGD:5509061 MGI
G Dvl2 dishevelled 2, dsh homolog (Drosophila) GBrowse link IAGP 11 69,814,128 69,823,611 RGD:5509061 MGI
G Dvl2 dishevelled 2, dsh homolog (Drosophila) GBrowse link IAGP 11 69,814,128 69,823,611 RGD:5509061 MGI
G Fat4 FAT tumor suppressor homolog 4 (Drosophila) GBrowse link IAGP 3 38,785,862 38,910,907 RGD:5509061 MGI
G Fzd1 frizzled homolog 1 (Drosophila) GBrowse link IAGP 5 4,753,839 4,758,216 RGD:5509061 MGI
G Fzd2 frizzled homolog 2 (Drosophila) GBrowse link IAGP 11 102,465,745 102,469,372 RGD:5509061 MGI
G Gpr98 G protein-coupled receptor 98 GBrowse link IAGP 13 81,234,067 81,772,143 RGD:5509061 MGI
G Gpr98 G protein-coupled receptor 98 GBrowse link IAGP 13 81,234,067 81,772,143 RGD:5509061 MGI
G Mkks McKusick-Kaufman syndrome GBrowse link IAGP 2 136,699,516 136,717,142 RGD:5509061 MGI
G Mks1 Meckel syndrome, type 1 GBrowse link IAGP 11 87,666,727 87,677,181 RGD:5509061 MGI
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 GBrowse link IAGP 13 78,328,234 78,338,243 RGD:5509061 MGI
G Pcdh15 protocadherin 15 GBrowse link IAGP 10 73,284,615 74,112,482 RGD:5509061 MGI
G Pcdh15 protocadherin 15 GBrowse link IAGP 10 73,284,615 74,112,482 RGD:5509061 MGI
G Ptk7 PTK7 protein tyrosine kinase 7 GBrowse link IAGP 17 46,701,400 46,766,453 RGD:5509061 MGI
G Ptk7 PTK7 protein tyrosine kinase 7 GBrowse link IAGP 17 46,701,400 46,766,453 RGD:5509061 MGI
G Scrib scribbled homolog (Drosophila) GBrowse link IAGP 15 75,877,616 75,900,160 RGD:5509061 MGI
G Ush1c Usher syndrome 1C GBrowse link IAGP 7 53,450,721 53,493,860 RGD:5509061 MGI
G Vangl1 vang-like 1 (van gogh, Drosophila) GBrowse link IAGP 3 101,960,618 102,008,616 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
G Vangl2 vang-like 2 (van gogh, Drosophila) GBrowse link IAGP 1 173,934,502 173,957,399 RGD:5509061 MGI
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 191180
    hearing/vestibular/ear phenotype 4036
      abnormal ear morphology 2999
        abnormal inner ear morphology 2252
          abnormal hair cell morphology 887
            abnormal cochlear hair cell morphology 803
              abnormal cochlear hair cell stereociliary bundle morphology 279
                abnormal orientation of cochlear hair cell stereociliary bundles 62
                  abnormal orientation of inner hair cell stereociliary bundles 14
                  abnormal orientation of outer hair cell stereociliary bundles 30
Path 2
Term Annotations click to browse term
  mammalian phenotype 191180
    hearing/vestibular/ear phenotype 4036
      abnormal ear morphology 2999
        abnormal inner ear morphology 2252
          abnormal membranous labyrinth morphology 1541
            abnormal cochlear labyrinth morphology 1231
              abnormal scala media morphology 1230
                abnormal organ of Corti morphology 1015
                  abnormal cochlear hair cell morphology 803
                    abnormal cochlear hair cell stereociliary bundle morphology 279
                      abnormal orientation of cochlear hair cell stereociliary bundles 62
                        abnormal orientation of inner hair cell stereociliary bundles 14
                        abnormal orientation of outer hair cell stereociliary bundles 30
paths to the root

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