Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

ONTOLOGY REPORT - ANNOTATIONS

Term:NAADP-sensitive calcium-release channel activity
go back to main search page
Accession:GO:0072345 term browser browse the term
Definition:Enables the transmembrane transfer of a calcium ion by a channel that opens when nicotinic acid adenine dinucleotide phosphate (NAADP) has been bound by the channel complex or one of its constituent parts.
Synonyms:xref: reactome:R-HSA-2685505 "TPCN1/2 transport lysosomal Ca2+ to cytosol"


show annotations for term's descendants           Sort by:
NAADP-sensitive calcium-release channel activity term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mcoln1 mucolipin TRP cation channel 1 enables IDA
IBA		 GO_REF:0000033 GO_Central
RGD		 PMID:17613490 GO_REF:0000033, RGD:7205504 NCBI chr12:1,560,341...1,574,252
Ensembl chr12:1,560,359...1,574,252 		JBrowse link
G Mcoln2 mucolipin TRP cation channel 2 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:235,053,816...235,102,703
Ensembl chr 2:235,053,816...235,102,702 		JBrowse link
G Mcoln3 mucolipin TRP cation channel 3 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:235,008,716...235,042,885
Ensembl chr 2:234,966,010...235,043,047 		JBrowse link
G Tpcn1 two pore segment channel 1 enables
NOT|enables		 ISO
IEA
ISS		 (PMID:19620632)
GO_REF:0000107
(PMID:24776928)
(MGI:6718238|PMID:24776928)
GO_REF:0000024		 RGD
Ensembl
UniProt		 PMID:19620632 PMID:24776928 GO_REF:0000024 GO_REF:0000107 MGI:6718238 NCBI chr12:35,972,813...36,029,632
Ensembl chr12:35,972,846...36,029,626 		JBrowse link
G Tpcn2 two pore segment channel 2 enables
NOT|enables		 ISO (PMID:19387438), (PMID:19620632), (PMID:20880839), (PMID:32167471)
(PMID:23063126)
(MGI:5285159|PMID:20495006), (MGI:5285171|PMID:19557428), (MGI:5691857|PMID:25144390)		 RGD PMID:19387438 PMID:19557428 PMID:19620632 PMID:20495006 PMID:20880839 More... MGI:5285159 MGI:5285171 MGI:5691857 NCBI chr 1:200,416,538...200,446,252
Ensembl chr 1:200,416,540...200,446,236 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  molecular_function 21010
    transporter activity 1259
      transmembrane transporter activity 1163
        monoatomic ion transmembrane transporter activity 752
          monoatomic ion channel activity 457
            ligand-gated monoatomic ion channel activity 183
              intracellularly ligand-gated monoatomic ion channel activity 32
                intracellularly gated calcium channel activity 18
                  NAADP-sensitive calcium-release channel activity 5
Path 2
Term Annotations click to browse term
  molecular_function 21010
    transporter activity 1259
      transmembrane transporter activity 1163
        passive transmembrane transporter activity 519
          channel activity 519
            gated channel activity 332
              ligand-gated channel activity 187
                ligand-gated monoatomic ion channel activity 183
                  ligand-gated monoatomic cation channel activity 129
                    ligand-gated calcium channel activity 33
                      intracellularly gated calcium channel activity 18
                        NAADP-sensitive calcium-release channel activity 5
paths to the root