ONTOLOGY REPORT - ANNOTATIONS

Term:mammary gland duct morphogenesis
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Accession:GO:0060603 term browser browse the term
Definition:The process in which anatomical structures of the mammary ducts are generated and organized. Mammary ducts are epithelial tubes that transport milk.

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mammary gland duct morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Gli2 GLI family zinc finger 2 GBrowse link ISO 13 31,551,089 31,607,264 RGD:1624291 RGD
G Gli2 GLI family zinc finger 2 GBrowse link IEA 13 31,551,089 31,607,264 RGD:1600115 ENSEMBL
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link ISO 1 206,102,750 206,206,350 RGD:1624291 RGD
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link ISO 4 171,337,114 171,444,932 RGD:1624291 RGD
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 GBrowse link ISO 18 32,371,496 32,459,145 RGD:1624291 RGD
G Ntn1 netrin 1 GBrowse link ISO 10 54,950,521 55,133,536 RGD:1624291 RGD
G Ntn1 netrin 1 GBrowse link IEA 10 54,950,521 55,133,536 RGD:1600115 ENSEMBL
G Ptch1 patched 1 GBrowse link ISO 17 7,088,234 7,142,459 RGD:1624291 RGD
G Ptch1 patched 1 GBrowse link IEA 17 7,088,234 7,142,459 RGD:1600115 ENSEMBL
G Scrib scribbled planar cell polarity protein GBrowse link ISO 7 114,077,733 114,100,721 RGD:1624291 RGD
G Scrib scribbled planar cell polarity protein GBrowse link IEA 7 114,077,733 114,100,721 RGD:1600115 ENSEMBL
G Slit2 slit homolog 2 (Drosophila) GBrowse link ISO 14 67,546,283 67,891,840 RGD:1624291 RGD
branch elongation involved in mammary gland duct branching term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Tgfb1 transforming growth factor, beta 1 GBrowse link ISO 1 80,894,705 80,911,020 RGD:1624291 RGD
G Tgfb1 transforming growth factor, beta 1 GBrowse link IEA 1 80,894,705 80,911,020 RGD:1600115 ENSEMBL
branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase GBrowse link ISO 1 250,528,730 250,693,952 RGD:1624291 RGD
G Btrc beta-transducin repeat containing E3 ubiquitin protein ligase GBrowse link IEA 1 250,528,730 250,693,952 RGD:1600115 ENSEMBL
G Ccl11 chemokine (C-C motif) ligand 11 GBrowse link ISO 10 70,279,161 70,283,762 RGD:1624291 RGD
G Ccl11 chemokine (C-C motif) ligand 11 GBrowse link IEA 10 70,279,161 70,283,762 RGD:1600115 ENSEMBL
G Csf1 colony stimulating factor 1 (macrophage) GBrowse link ISO 2 203,292,765 203,307,968 RGD:1624291 RGD
G Csf1 colony stimulating factor 1 (macrophage) GBrowse link IEA 2 203,292,765 203,307,968 RGD:1600115 ENSEMBL
G Ddr1 discoidin domain receptor tyrosine kinase 1 GBrowse link ISO 20 3,194,265 3,214,611 RGD:1624291 RGD
G Ddr1 discoidin domain receptor tyrosine kinase 1 GBrowse link IEA 20 3,194,265 3,214,611 RGD:1600115 ENSEMBL
G Epha2 Eph receptor A2 GBrowse link ISO 5 160,185,143 160,214,727 RGD:1624291 RGD
G Etv4 ets variant 4 GBrowse link ISO 10 90,808,439 90,824,019 RGD:1624291 RGD
G Etv4 ets variant 4 GBrowse link IEA 10 90,808,439 90,824,019 RGD:1600115 ENSEMBL
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link ISO 1 206,102,750 206,206,350 RGD:1624291 RGD
G Lrp5 low density lipoprotein receptor-related protein 5 GBrowse link IBA 1 206,102,750 206,206,350 RGD:1600115 RefGenome
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link ISO 4 171,337,114 171,444,932 RGD:1624291 RGD
G Lrp6 low density lipoprotein receptor-related protein 6 GBrowse link IBA 4 171,337,114 171,444,932 RGD:1600115 RefGenome
G Msx2 msh homeobox 2 GBrowse link ISO 17 17,243,262 17,248,927 RGD:1624291 RGD
G Msx2 msh homeobox 2 GBrowse link IEA 17 17,243,262 17,248,927 RGD:1600115 ENSEMBL
G Pml promyelocytic leukemia GBrowse link ISO 8 62,020,438 62,051,927 RGD:1624291 RGD
G Slc12a2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 GBrowse link ISO 18 53,673,215 53,741,352 RGD:1624291 RGD
G Slc12a2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 GBrowse link IEA 18 53,673,215 53,741,352 RGD:1600115 ENSEMBL
G Src v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) GBrowse link ISO 3 148,157,256 148,170,524 RGD:1624291 RGD
G Src v-src sarcoma (Schmidt-Ruppin A-2) viral oncogene homolog (avian) GBrowse link IEA 3 148,157,256 148,170,524 RGD:1600115 ENSEMBL
G Tbx3 T-box 3 GBrowse link ISO 12 38,155,494 38,166,670 RGD:1624291 RGD
G Tbx3 T-box 3 GBrowse link IEA 12 38,155,494 38,166,670 RGD:1600115 ENSEMBL
dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Areg amphiregulin GBrowse link ISO 14 18,466,313 18,475,571 RGD:1624291 RGD
G Areg amphiregulin GBrowse link IEA 14 18,466,313 18,475,571 RGD:1600115 ENSEMBL
G Tfap2c transcription factor AP-2 gamma GBrowse link ISO 3 163,459,283 163,467,166 RGD:1624291 RGD
G Tfap2c transcription factor AP-2 gamma GBrowse link IEA 3 163,459,283 163,467,166 RGD:1600115 ENSEMBL
epithelial cell proliferation involved in mammary gland duct elongation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Areg amphiregulin GBrowse link ISO 14 18,466,313 18,475,571 RGD:1624291 RGD
G Areg amphiregulin GBrowse link IEA 14 18,466,313 18,475,571 RGD:1600115 ENSEMBL
G Esr1 estrogen receptor 1 GBrowse link ISO 1 35,523,680 35,759,891 RGD:1624291 RGD
G Esr1 estrogen receptor 1 GBrowse link IEA 1 35,523,680 35,759,891 RGD:1600115 ENSEMBL
G Med1 mediator complex subunit 1 GBrowse link ISO 10 86,917,525 86,959,080 RGD:1624291 RGD
G Med1 mediator complex subunit 1 GBrowse link IEA 10 86,917,525 86,959,080 RGD:1600115 ENSEMBL
G Tfap2c transcription factor AP-2 gamma GBrowse link ISO 3 163,459,283 163,467,166 RGD:1624291 RGD
G Tfap2c transcription factor AP-2 gamma GBrowse link IEA 3 163,459,283 163,467,166 RGD:1600115 ENSEMBL
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link ISO 16 3,782,025 3,799,625 RGD:1624291 RGD
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link IEA 16 3,782,025 3,799,625 RGD:1600115 ENSEMBL
lateral sprouting involved in mammary gland duct morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ar androgen receptor GBrowse link ISO X 85,949,507 86,119,199 RGD:1624291 RGD
G Ar androgen receptor GBrowse link IEA X 85,949,507 86,119,199 RGD:1600115 ENSEMBL
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link ISO 16 3,782,025 3,799,625 RGD:1624291 RGD
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link IEA 16 3,782,025 3,799,625 RGD:1600115 ENSEMBL
mammary duct terminal end bud growth term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ccl11 chemokine (C-C motif) ligand 11 GBrowse link ISO 10 70,279,161 70,283,762 RGD:1624291 RGD
G Ccl11 chemokine (C-C motif) ligand 11 GBrowse link IEA 10 70,279,161 70,283,762 RGD:1600115 ENSEMBL
G Csf1 colony stimulating factor 1 (macrophage) GBrowse link ISO 2 203,292,765 203,307,968 RGD:1624291 RGD
G Csf1 colony stimulating factor 1 (macrophage) GBrowse link IEA 2 203,292,765 203,307,968 RGD:1600115 ENSEMBL
G Robo1 roundabout, axon guidance receptor, homolog 1 (Drosophila) GBrowse link ISO 11 10,784,947 11,720,646 RGD:1624291 RGD
G Slc12a2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 GBrowse link ISO 18 53,673,215 53,741,352 RGD:1624291 RGD
G Slc12a2 solute carrier family 12 (sodium/potassium/chloride transporters), member 2 GBrowse link IEA 18 53,673,215 53,741,352 RGD:1600115 ENSEMBL
G Slit2 slit homolog 2 (Drosophila) GBrowse link ISO 14 67,546,283 67,891,840 RGD:1624291 RGD
mammary gland branching involved in pregnancy term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Esr1 estrogen receptor 1 GBrowse link ISO 1 35,523,680 35,759,891 RGD:1624291 RGD
G Esr1 estrogen receptor 1 GBrowse link IEA 1 35,523,680 35,759,891 RGD:1600115 ENSEMBL
G Med1 mediator complex subunit 1 GBrowse link ISO 10 86,917,525 86,959,080 RGD:1624291 RGD
G Med1 mediator complex subunit 1 GBrowse link IEA 10 86,917,525 86,959,080 RGD:1600115 ENSEMBL
G Vdr vitamin D (1,25- dihydroxyvitamin D3) receptor GBrowse link ISO 7 136,567,614 136,617,280 RGD:1624291 RGD
G Vdr vitamin D (1,25- dihydroxyvitamin D3) receptor GBrowse link IEA 7 136,567,614 136,617,280 RGD:1600115 ENSEMBL
mammary gland branching involved in thelarche term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Areg amphiregulin GBrowse link ISO 14 18,466,313 18,475,571 RGD:1624291 RGD
G Areg amphiregulin GBrowse link ISO 14 18,466,313 18,475,571 RGD:1624291 RGD
G Areg amphiregulin GBrowse link IEA 14 18,466,313 18,475,571 RGD:1600115 ENSEMBL
G Med1 mediator complex subunit 1 GBrowse link ISO 10 86,917,525 86,959,080 RGD:1624291 RGD
G Med1 mediator complex subunit 1 GBrowse link IEA 10 86,917,525 86,959,080 RGD:1600115 ENSEMBL
G Ncoa3 nuclear receptor coactivator 3 GBrowse link ISO 3 157,168,492 157,196,566 RGD:1624291 RGD
G Ncoa3 nuclear receptor coactivator 3 GBrowse link IEA 3 157,168,492 157,196,566 RGD:1600115 ENSEMBL
G Phb2 prohibitin 2 GBrowse link ISO 4 160,835,328 160,839,933 RGD:1624291 RGD
G Phb2 prohibitin 2 GBrowse link IEA 4 160,835,328 160,839,933 RGD:1600115 ENSEMBL
G Tgfb1 transforming growth factor, beta 1 GBrowse link ISO 1 80,894,705 80,911,020 RGD:1624291 RGD
G Tgfb1 transforming growth factor, beta 1 GBrowse link IEA 1 80,894,705 80,911,020 RGD:1600115 ENSEMBL
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link ISO 16 3,782,025 3,799,625 RGD:1624291 RGD
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link IEA 16 3,782,025 3,799,625 RGD:1600115 ENSEMBL
mammary gland bud elongation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Pthlh parathyroid hormone-like hormone GBrowse link ISO 4 184,887,702 184,898,841 RGD:1624291 RGD
mammary gland bud formation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Fgf10 fibroblast growth factor 10 GBrowse link ISO 2 50,866,799 50,940,319 RGD:1624291 RGD
G Fgf10 fibroblast growth factor 10 GBrowse link IEA 2 50,866,799 50,940,319 RGD:1600115 ENSEMBL
G Fgfr2 fibroblast growth factor receptor 2 GBrowse link ISO 1 189,482,975 189,589,279 RGD:1624291 RGD
G Fgfr2 fibroblast growth factor receptor 2 GBrowse link IEA 1 189,482,975 189,589,279 RGD:1600115 ENSEMBL
mammary gland bud morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Sostdc1 sclerostin domain containing 1 GBrowse link ISO 6 55,066,277 55,070,451 RGD:1624291 RGD
regulation of branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cav3 caveolin 3 GBrowse link ISO 4 148,294,428 148,310,380 RGD:1624291 RGD
G Cav3 caveolin 3 GBrowse link IEA 4 148,294,428 148,310,380 RGD:1600115 ENSEMBL
G Etv4 ets variant 4 GBrowse link ISO 10 90,808,439 90,824,019 RGD:1624291 RGD
G Etv4 ets variant 4 GBrowse link IEA 10 90,808,439 90,824,019 RGD:1600115 ENSEMBL
G Etv5 ets variant 5 GBrowse link ISO 11 80,846,286 80,904,013 RGD:1624291 RGD
G Etv5 ets variant 5 GBrowse link IEA 11 80,846,286 80,904,013 RGD:1600115 ENSEMBL
G Phb2 prohibitin 2 GBrowse link ISO 4 160,835,328 160,839,933 RGD:1624291 RGD
G Phb2 prohibitin 2 GBrowse link IEA 4 160,835,328 160,839,933 RGD:1600115 ENSEMBL
G Tgfb1 transforming growth factor, beta 1 GBrowse link ISO 1 80,894,705 80,911,020 RGD:1624291 RGD
G Tgfb1 transforming growth factor, beta 1 GBrowse link IEA 1 80,894,705 80,911,020 RGD:1600115 ENSEMBL
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link ISO 16 3,782,025 3,799,625 RGD:1624291 RGD
G Wnt5a wingless-type MMTV integration site family, member 5A GBrowse link IEA 16 3,782,025 3,799,625 RGD:1600115 ENSEMBL
tertiary branching involved in mammary gland duct morphogenesis term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ar androgen receptor GBrowse link ISO X 85,949,507 86,119,199 RGD:1624291 RGD
G Ar androgen receptor GBrowse link IEA X 85,949,507 86,119,199 RGD:1600115 ENSEMBL
G Pgr progesterone receptor GBrowse link ISO 8 5,784,717 5,845,901 RGD:1624291 RGD
G Wnt4 wingless-type MMTV integration site family, member 4 GBrowse link ISO 5 156,064,371 156,083,198 RGD:1624291 RGD
G Wnt4 wingless-type MMTV integration site family, member 4 GBrowse link IEA 5 156,064,371 156,083,198 RGD:1600115 ENSEMBL
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 135981
    developmental process 29436
      single-organism developmental process 22742
        gland morphogenesis 378
          mammary gland morphogenesis 152
            mammary gland duct morphogenesis 106
              branching involved in mammary gland duct morphogenesis + 80
              mammary duct terminal end bud growth 8
              mammary gland bud morphogenesis + 6
              mammary gland cord morphogenesis + 0
              mammary gland duct cavitation 0
              mammary gland duct regression in males 0
Path 2
Term Annotations click to browse term
  biological_process 135981
    single-organism process 88424
      single-multicellular organism process 35814
        multicellular organismal development 24574
          system development 21122
            organ development 14121
              gland development 1027
                mammary gland development 434
                  mammary gland morphogenesis 152
                    mammary gland duct morphogenesis 106
                      branching involved in mammary gland duct morphogenesis + 80
                      mammary duct terminal end bud growth 8
                      mammary gland bud morphogenesis + 6
                      mammary gland cord morphogenesis + 0
                      mammary gland duct cavitation 0
                      mammary gland duct regression in males 0
paths to the root

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