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ONTOLOGY REPORT - ANNOTATIONS


Term:cell pole
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Accession:GO:0060187 term browser browse the term
Definition:Either of two different areas at opposite ends of an axis of a cell.
Comment:Note that this term differs from 'cell tip ; GO:0051286' in that it is applicable to a broad range of cell shapes including spherical and cuboidal.



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cell pole term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Astn2 astrotactin 2 located_in ISO (MGI:4459565|PMID:20573900) RGD PMID:20573900 MGI:4459565 NCBI chr 5:78,758,142...79,744,021
Ensembl chr 5:78,758,142...79,748,273
JBrowse link
G Vangl2 VANGL planar cell polarity protein 2 located_in ISO (MGI:3849215|PMID:19497282) RGD PMID:19497282 MGI:3849215 NCBI chr13:84,462,731...84,489,404
Ensembl chr13:84,465,527...84,489,378
JBrowse link
apical pole of neuron term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Slc3a2 solute carrier family 3 member 2 located_in IEA
ISO
GO_REF:0000107
(MGI:3624070|PMID:16399997)
Ensembl
RGD
PMID:16399997 GO_REF:0000107 MGI:3624070 NCBI chr 1:205,604,468...205,618,931
Ensembl chr 1:205,604,468...205,618,931
JBrowse link
basal pole of outer hair cell term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD (All species) (All species) NCBI chr 4:151,764,138...152,379,454
Ensembl chr 4:151,764,138...152,379,648
JBrowse link
cell tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G C4h2orf81 similar to human chromosome 2 open reading frame 81 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:115,661,617...115,667,929
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Dctn1 dynactin subunit 1 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 4:115,671,024...115,703,824
Ensembl chr 4:115,661,638...115,703,815
JBrowse link
G Des desmin located_in ISS
ISO
GO_REF:0000024
(MGI:7494390|PMID:35959657)
UniProt
RGD
PMID:35959657 GO_REF:0000024 MGI:7494390 NCBI chr 9:76,850,979...76,858,695
Ensembl chr 9:76,850,982...76,858,699
JBrowse link
G Ezr ezrin IDA RGD PMID:17061246 RGD:7207800 NCBI chr 1:46,967,961...47,011,505
Ensembl chr 1:46,967,658...47,011,505
JBrowse link
G Gnb5 G protein subunit beta 5 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr 8:76,076,120...76,105,069
Ensembl chr 8:76,073,306...76,105,069
JBrowse link
G Gpr179 G protein-coupled receptor 179 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr10:82,324,568...82,340,448
Ensembl chr10:82,337,771...82,340,448
JBrowse link
G Grm6 glutamate metabotropic receptor 6 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717
JBrowse link
G Lrit3 leucine-rich repeat, Ig-like and transmembrane domains 3 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr 2:218,337,215...218,360,318
Ensembl chr 2:218,337,819...218,357,307
JBrowse link
G Msn moesin IDA RGD PMID:17061246 RGD:7207800 NCBI chr  X:60,996,043...61,064,011
Ensembl chr  X:60,995,951...61,065,628
JBrowse link
G Pex5l peroxisomal biogenesis factor 5-like IDA RGD PMID:11278749 RGD:737646 NCBI chr 2:115,694,868...115,908,365
Ensembl chr 2:115,700,972...115,913,628
JBrowse link
G Pkp2 plakophilin 2 located_in IEA GO_REF:0000108 GOC GO_REF:0000108 NCBI chr11:84,661,783...84,727,730
Ensembl chr11:84,661,783...84,727,730
JBrowse link
G Rab8b RAB8B, member RAS oncogene family IDA RGD PMID:11278749 RGD:737646 NCBI chr 8:67,458,921...67,536,466
Ensembl chr 8:67,458,923...67,536,384
JBrowse link
G Rdx radixin IDA RGD PMID:17061246 RGD:7207800 NCBI chr 8:52,379,494...52,437,673
Ensembl chr 8:52,379,494...52,437,678
JBrowse link
G Rgs11 regulator of G-protein signaling 11 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr10:15,222,804...15,231,062
Ensembl chr10:15,222,803...15,231,060
JBrowse link
G Rgs7 regulator of G-protein signaling 7 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr13:86,979,269...87,408,834
Ensembl chr13:86,979,279...87,408,888
JBrowse link
G Slc32a1 solute carrier family 32 member 1 located_in ISO (MGI:2181231|PMID:12115694) RGD PMID:12115694 MGI:2181231 NCBI chr 3:147,267,373...147,271,842
Ensembl chr 3:147,267,373...147,271,844
JBrowse link
G Tbcb tubulin folding cofactor B located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:85,477,639...85,483,488
Ensembl chr 1:85,477,640...85,483,488
JBrowse link
G Tf transferrin IDA RGD PMID:17373738 RGD:1601530 NCBI chr 8:103,789,780...103,816,487
Ensembl chr 8:103,767,995...103,816,511
JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 is_active_in ISO (MGI:5906553|PMID:25997951) RGD PMID:25997951 MGI:5906553 NCBI chr 1:117,718,896...117,835,434
Ensembl chr 1:117,718,896...117,834,605
JBrowse link
growing cell tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pi4k2a phosphatidylinositol 4-kinase type 2 alpha located_in IDA PMID:21998198 UniProt PMID:21998198 RGD:8554550 NCBI chr 1:240,902,804...240,929,234
Ensembl chr 1:240,902,855...240,929,337
JBrowse link
mating projection tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bin3 bridging integrator 3 located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr15:45,173,725...45,212,607
Ensembl chr15:45,173,732...45,212,604
JBrowse link
G Sh3pxd2a SH3 and PX domains 2A located_in IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr 1:246,153,660...246,359,806
Ensembl chr 1:246,160,502...246,360,166
JBrowse link
new growing cell tip term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Grm6 glutamate metabotropic receptor 6 located_in ISO (MGI:4420740|PMID:19966281) RGD PMID:19966281 MGI:4420740 NCBI chr10:35,167,985...35,182,717
Ensembl chr10:35,167,985...35,182,717
JBrowse link
G Trpm1 transient receptor potential cation channel, subfamily M, member 1 located_in ISO (MGI:4420740|PMID:19966281) RGD PMID:19966281 MGI:4420740 NCBI chr 1:117,718,896...117,835,434
Ensembl chr 1:117,718,896...117,834,605
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21257
    cellular anatomical entity 21099
      cell pole 26
        apical pole of neuron 1
        basal pole of neuron 0
        basal pole of outer hair cell 1
        cell tip + 22
        new cell pole 0
        old cell pole 0
paths to the root