ONTOLOGY REPORT - ANNOTATIONS |
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Term: | fibroblast apoptotic process |
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Accession: | GO:0044346
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browse the term
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Definition: | Any apoptotic process in a fibroblast, a connective tissue cell which secretes an extracellular matrix rich in collagen and other macromolecules. |
Synonyms: | narrow_synonym: | fibroblast apoptosis |
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Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of |
ISO |
(MGI:3701148|PMID:17227893) |
RGD |
PMID:17227893 |
MGI:3701148 |
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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Api5 |
apoptosis inhibitor 5 |
acts_upstream_of |
ISO |
(MGI:1096223|PMID:9307294) |
RGD |
PMID:9307294 |
MGI:1096223 |
NCBI chr 3:80,378,096...80,403,259
Ensembl chr 3:80,378,096...80,403,264
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Bak1 |
BCL2-antagonist/killer 1 |
acts_upstream_of_or_within |
ISO |
(MGI:3689797|PMID:15901672) |
RGD |
PMID:15901672 |
MGI:3689797 |
NCBI chr20:5,100,480...5,109,669
Ensembl chr20:5,100,480...5,109,264
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Bbc3 |
Bcl-2 binding component 3 |
acts_upstream_of involved_in |
ISO IEA |
MGI:2681654 (MGI:2679929|PMID:14500851) GO_REF:0000107 |
RGD Ensembl |
PMID:14500851 |
GO_REF:0000107 MGI:2679929 |
NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509
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Bcl10 |
BCL10, immune signaling adaptor |
NOT|acts_upstream_of_or_within |
ISO |
MGI:2158304 (MGI:1930354|PMID:11163238) |
RGD |
PMID:11163238 |
MGI:1930354 |
NCBI chr 2:234,840,880...234,850,520
Ensembl chr 2:234,840,858...234,850,523
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Casp12 |
caspase 12 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:2667259|PMID:12847083) GO_REF:0000107 |
RGD Ensembl |
PMID:12847083 |
GO_REF:0000107 MGI:2667259 |
NCBI chr 8:2,642,296...2,669,549
Ensembl chr 8:2,642,434...2,674,037
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Casp3 |
caspase 3 |
acts_upstream_of_or_within |
ISO |
MGI:2158753 (MGI:2667259|PMID:12847083), (MGI:3615714|PMID:16469926) |
RGD |
PMID:12847083 PMID:16469926 |
MGI:2667259 MGI:3615714 |
NCBI chr16:45,662,910...45,681,171
Ensembl chr16:45,662,910...45,684,648
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Casp7 |
caspase 7 |
acts_upstream_of_or_within |
ISO |
MGI:107739 (MGI:3615714|PMID:16469926) |
RGD |
PMID:16469926 |
MGI:3615714 |
NCBI chr 1:255,437,438...255,476,737
Ensembl chr 1:255,437,172...255,476,729
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Casp9 |
caspase 9 |
acts_upstream_of_or_within |
ISO |
(MGI:2667259|PMID:12847083) |
RGD |
PMID:12847083 |
MGI:2667259 |
NCBI chr 5:154,108,872...154,126,628
Ensembl chr 5:154,109,046...154,126,626
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Cfdp1 |
craniofacial development protein 1 |
acts_upstream_of involved_in |
ISO IEA |
(MGI:2384464|PMID:12153613) GO_REF:0000107 |
RGD Ensembl |
PMID:12153613 |
GO_REF:0000107 MGI:2384464 |
NCBI chr19:39,718,313...39,823,824
Ensembl chr19:39,718,347...39,823,824
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Cul3 |
cullin 3 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:3714267 (MGI:3713609|PMID:17339333) GO_REF:0000107 |
RGD Ensembl |
PMID:17339333 |
GO_REF:0000107 MGI:3713609 |
NCBI chr 9:81,592,641...81,670,428
Ensembl chr 9:81,592,641...81,670,462
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Ddias |
DNA damage-induced apoptosis suppressor |
acts_upstream_of |
ISO |
(MGI:3718924|PMID:17515607) |
RGD |
PMID:17515607 |
MGI:3718924 |
NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
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Gas6 |
growth arrest specific 6 |
acts_upstream_of |
ISO |
MGI:2675495 (MGI:3044336|PMID:15184064) |
RGD |
PMID:15184064 |
MGI:3044336 |
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
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Men1 |
menin 1 |
acts_upstream_of |
ISO |
MGI:1097161|MGI:99702 (MGI:3037372|PMID:14688275) |
RGD |
PMID:14688275 |
MGI:3037372 |
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
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Nupr1 |
nuclear protein 1, transcriptional regulator |
acts_upstream_of |
ISO |
MGI:3784016 (MGI:3784021|PMID:11896600) |
RGD |
PMID:11896600 |
MGI:3784021 |
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
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Pmaip1 |
phorbol-12-myristate-13-acetate-induced protein 1 |
acts_upstream_of involved_in |
ISO IEA |
MGI:2681649 (MGI:2679929|PMID:14500851) GO_REF:0000107 |
RGD Ensembl |
PMID:14500851 |
GO_REF:0000107 MGI:2679929 |
NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429
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Api5 |
apoptosis inhibitor 5 |
acts_upstream_of_or_within |
ISO |
(MGI:1096223|PMID:9307294) |
RGD |
PMID:9307294 |
MGI:1096223 |
NCBI chr 3:80,378,096...80,403,259
Ensembl chr 3:80,378,096...80,403,264
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Cfdp1 |
craniofacial development protein 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:2384464|PMID:12153613) GO_REF:0000107 |
RGD Ensembl |
PMID:12153613 |
GO_REF:0000107 MGI:2384464 |
NCBI chr19:39,718,313...39,823,824
Ensembl chr19:39,718,347...39,823,824
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Chd8 |
chromodomain helicase DNA binding protein 8 |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:3839031|PMID:19151705) GO_REF:0000107 |
RGD Ensembl |
PMID:19151705 |
GO_REF:0000107 MGI:3839031 |
NCBI chr15:24,905,789...24,965,461
Ensembl chr15:24,905,789...24,951,285
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Ddias |
DNA damage-induced apoptosis suppressor |
acts_upstream_of_or_within |
ISO |
(MGI:3718924|PMID:17515607) |
RGD |
PMID:17515607 |
MGI:3718924 |
NCBI chr 1:146,906,150...146,930,462
Ensembl chr 1:146,906,154...146,930,462
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Gas6 |
growth arrest specific 6 |
involved_in acts_upstream_of_or_within |
ISS ISO |
GO_REF:0000024 MGI:2675495 (MGI:3044336|PMID:15184064) (PMID:16359517) |
UniProt RGD |
PMID:15184064 PMID:16359517 |
GO_REF:0000024 MGI:3044336 |
NCBI chr16:76,045,430...76,075,904
Ensembl chr16:76,045,426...76,075,904
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Mir155 |
microRNA 155 |
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IDA |
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RGD |
PMID:32317960 |
RGD:151347420 |
NCBI chr11:23,774,654...23,774,718
Ensembl chr11:23,774,654...23,774,718
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Mir21 |
microRNA 21 |
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IDA |
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RGD |
PMID:29084974 |
RGD:41404715 |
NCBI chr10:71,405,257...71,405,348
Ensembl chr10:71,405,257...71,405,348
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Pik3ca |
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha |
acts_upstream_of_or_within |
ISO |
(MGI:3047434|PMID:15192701) |
RGD |
PMID:15192701 |
MGI:3047434 |
NCBI chr 2:115,175,275...115,249,034
Ensembl chr 2:115,174,984...115,249,032
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Pik3cg |
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma |
acts_upstream_of_or_within |
ISO |
(MGI:3047434|PMID:15192701) |
RGD |
PMID:15192701 |
MGI:3047434 |
NCBI chr 6:48,766,778...48,802,098
Ensembl chr 6:48,766,864...48,802,043
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Sfrp1 |
secreted frizzled-related protein 1 |
involved_in |
ISO IEA |
(PMID:14581477) GO_REF:0000107 |
RGD Ensembl |
PMID:14581477 |
GO_REF:0000107 |
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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Sirt1 |
sirtuin 1 |
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IMP |
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RGD |
PMID:23479127 |
RGD:9585774 |
NCBI chr20:25,307,225...25,329,273
Ensembl chr20:25,306,917...25,329,260
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Apc |
APC regulator of WNT signaling pathway |
acts_upstream_of_or_within |
ISO |
(MGI:3701148|PMID:17227893) |
RGD |
PMID:17227893 |
MGI:3701148 |
NCBI chr18:25,828,558...25,925,511
Ensembl chr18:25,864,222...25,922,696
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Bbc3 |
Bcl-2 binding component 3 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2681654 (MGI:2679929|PMID:14500851) GO_REF:0000107 |
RGD Ensembl |
PMID:14500851 |
GO_REF:0000107 MGI:2679929 |
NCBI chr 1:77,013,281...77,022,509
Ensembl chr 1:77,014,543...77,022,509
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Bcl2l11 |
Bcl2-like 11 |
involved_in |
ISO IEA |
(PMID:11997495) GO_REF:0000107 |
RGD Ensembl |
PMID:11997495 |
GO_REF:0000107 |
NCBI chr 3:115,366,783...115,404,068
Ensembl chr 3:115,366,646...115,404,068
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Bid |
BH3 interacting domain death agonist |
acts_upstream_of_or_within involved_in |
ISO IEA |
(MGI:84156|PMID:8918887) GO_REF:0000107 |
RGD Ensembl |
PMID:8918887 |
GO_REF:0000107 MGI:84156 |
NCBI chr 4:154,113,198...154,136,353
Ensembl chr 4:154,113,198...154,134,720
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Btg1 |
BTG anti-proliferation factor 1 |
involved_in |
ISO ISS |
(PMID:9690562) GO_REF:0000024 |
RGD UniProt |
PMID:9690562 |
GO_REF:0000024 |
NCBI chr 7:31,341,391...31,343,649
Ensembl chr 7:31,341,027...31,343,649
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Men1 |
menin 1 |
acts_upstream_of_or_within |
ISO |
MGI:1097161|MGI:99702 (MGI:3037372|PMID:14688275) |
RGD |
PMID:14688275 |
MGI:3037372 |
NCBI chr 1:203,638,905...203,644,871
Ensembl chr 1:203,639,000...203,644,871
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Nupr1 |
nuclear protein 1, transcriptional regulator |
acts_upstream_of_or_within |
ISO |
MGI:3784016 (MGI:3784021|PMID:11896600) |
RGD |
PMID:11896600 |
MGI:3784021 |
NCBI chr 1:181,213,292...181,215,327
Ensembl chr 1:181,213,368...181,215,281
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Pmaip1 |
phorbol-12-myristate-13-acetate-induced protein 1 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:2681649 (MGI:2679929|PMID:14500851) GO_REF:0000107 |
RGD Ensembl |
PMID:14500851 |
GO_REF:0000107 MGI:2679929 |
NCBI chr18:59,986,020...59,992,434
Ensembl chr18:59,986,017...59,992,429
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Prdm11 |
PR/SET domain 11 |
involved_in |
ISO |
(PMID:25499759) |
RGD |
PMID:25499759 |
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NCBI chr 3:78,925,654...79,005,495
Ensembl chr 3:78,932,087...79,005,320
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Sfrp1 |
secreted frizzled-related protein 1 |
involved_in |
IEA ISO |
GO_REF:0000107 (PMID:14581477) |
Ensembl RGD |
PMID:14581477 |
GO_REF:0000107 |
NCBI chr16:68,575,763...68,614,180
Ensembl chr16:68,575,763...68,614,286
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Socs1 |
suppressor of cytokine signaling 1 |
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IMP |
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RGD |
PMID:32317960 |
RGD:151347420 |
NCBI chr10:4,882,651...4,884,342
Ensembl chr10:4,882,560...4,884,383
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Stk17b |
serine/threonine kinase 17b |
involved_in |
ISS ISO |
GO_REF:0000024 (PMID:9786912) |
UniProt RGD |
PMID:9786912 |
GO_REF:0000024 |
NCBI chr 9:55,307,485...55,338,085
Ensembl chr 9:55,307,668...55,338,031
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Tp63 |
tumor protein p63 |
involved_in |
ISO |
(PMID:9774969) |
RGD |
PMID:9774969 |
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NCBI chr11:74,838,858...75,049,764
Ensembl chr11:74,838,859...75,049,398
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Ier3ip1 |
immediate early response 3 interacting protein 1 |
involved_in |
ISS |
GO_REF:0000024 |
UniProt |
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GO_REF:0000024 |
NCBI chr18:70,474,978...70,486,062
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Ier3ip1-ps1 |
immediate early response 3 interacting protein 1, pseudogene 1 |
involved_in |
ISO |
(PMID:21835305) |
RGD |
PMID:21835305 |
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NCBI chr 4:132,342,131...132,342,625
Ensembl chr 4:132,332,180...132,342,316
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Ruvbl1 |
RuvB-like AAA ATPase 1 |
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IMP |
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RGD |
PMID:12185582 |
RGD:9588231 |
NCBI chr 4:120,932,486...120,967,400
Ensembl chr 4:120,932,417...121,029,384
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Tp53 |
tumor protein p53 |
acts_upstream_of_or_within involved_in |
ISO IEA |
MGI:1927345 (MGI:3708426|PMID:17116431) GO_REF:0000107 |
RGD Ensembl |
PMID:17116431 |
GO_REF:0000107 MGI:3708426 |
NCBI chr10:54,300,070...54,311,525
Ensembl chr10:54,300,048...54,311,524
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Xrcc2 |
X-ray repair cross complementing 2 |
acts_upstream_of_or_within |
ISO |
MGI:98834 (MGI:3708426|PMID:17116431) |
RGD |
PMID:17116431 |
MGI:3708426 |
NCBI chr 4:9,423,873...9,502,980
Ensembl chr 4:9,423,898...9,442,482
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