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ONTOLOGY REPORT - ANNOTATIONS

Term:calyx of Held
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Accession:GO:0044305 term browser browse the term
Definition:The terminal specialization of a calyciferous axon which forms large synapses in the mammalian auditory central nervous system.
Synonyms:xref: NIF_Subcellular:sao1684283879
 never_in_taxon: NCBITaxon:8782 ! Aves


show annotations for term's descendants           Sort by:
calyx of Held term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aak1 AP2 associated kinase 1 is_active_in EXP
IDA		 PMID:33376223 SynGO PMID:33376223 PMID:33376223 RGD:155230702, RGD:155230702 NCBI chr 4:119,300,128...119,451,834
Ensembl chr 4:119,295,257...119,450,969 		JBrowse link
G Actb actin, beta located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:27840001)		 Ensembl
RGD		 PMID:27840001 GO_REF:0000107 NCBI chr12:11,663,112...11,666,697
Ensembl chr12:11,663,109...11,672,877 		JBrowse link
G Actg1 actin, gamma 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:27840001)		 Ensembl
RGD		 PMID:27840001 GO_REF:0000107 NCBI chr10:105,619,738...105,622,587
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232 		JBrowse link
G Actg1l1 actin, gamma 1 like 1 located_in IEA GO_REF:0000107 Ensembl GO_REF:0000107 NCBI chr 3:72,977,767...72,979,691
Ensembl chr10:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232
Ensembl chr 3:105,619,737...105,624,232 		JBrowse link
G Adora1 adenosine A1 receptor is_active_in IDA
EXP		 PMID:12963795 SynGO PMID:12963795 PMID:12963795 RGD:13702434, RGD:13702434 NCBI chr13:45,658,872...45,695,821
Ensembl chr13:45,658,872...45,695,801 		JBrowse link
G Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 is_active_in IDA PMID:17220883 SynGO PMID:17220883 RGD:13702313 NCBI chr 1:80,572,790...80,601,936
Ensembl chr 1:80,572,796...80,601,918 		JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A is_active_in IDA PMID:25533484 SynGO PMID:25533484 RGD:405650228 NCBI chr19:23,520,741...23,819,971
Ensembl chr19:23,520,741...23,823,225 		JBrowse link
G Calb1 calbindin 1 is_active_in IDA PMID:15355314 SynGO PMID:15355314 RGD:13702370 NCBI chr 5:29,375,624...29,402,532
Ensembl chr 5:29,375,642...29,402,431 		JBrowse link
G Calm1 calmodulin 1 is_active_in ISO (PMID:31628181) RGD PMID:31628181 NCBI chr 6:119,487,691...119,495,759
Ensembl chr 6:119,487,621...119,498,227 		JBrowse link
G Calm2 calmodulin 2 is_active_in ISO (PMID:31628181) RGD PMID:31628181 NCBI chr 6:7,091,624...7,104,284
Ensembl chr 6:7,091,567...7,104,287
Ensembl chr15:7,091,567...7,104,287 		JBrowse link
G Calm3 calmodulin 3 is_active_in ISO (PMID:31628181) RGD PMID:31628181 NCBI chr 1:77,590,668...77,597,776
Ensembl chr 1:77,589,230...77,592,207 		JBrowse link
G Cplx1 complexin 1 is_active_in ISO (PMID:26019341) RGD PMID:26019341 NCBI chr14:1,184,677...1,216,392 JBrowse link
G Cplx2 complexin 2 is_active_in ISO (PMID:26019341) RGD PMID:26019341 NCBI chr17:10,219,577...10,292,835
Ensembl chr17:10,222,347...10,293,855 		JBrowse link
G Git1 GIT ArfGAP 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:26637799)		 Ensembl
RGD		 PMID:26637799 GO_REF:0000107 NCBI chr10:62,342,082...62,356,379
Ensembl chr10:62,342,299...62,356,373 		JBrowse link
G Git2 GIT ArfGAP 2 is_active_in ISO (PMID:26637799) RGD PMID:26637799 NCBI chr12:41,829,717...41,872,621
Ensembl chr12:41,829,730...41,871,097 		JBrowse link
G Glra1 glycine receptor, alpha 1 is_active_in IDA PMID:23175852 SynGO PMID:23175852 RGD:13702302 NCBI chr10:39,625,853...39,727,897
Ensembl chr10:39,629,459...39,727,162 		JBrowse link
G Htr1b 5-hydroxytryptamine receptor 1B is_active_in IDA
EXP		 PMID:17067296 SynGO PMID:17067296 PMID:17067296 RGD:13702319, RGD:13702319 NCBI chr 8:82,513,572...82,534,670
Ensembl chr 8:82,517,360...82,534,549 		JBrowse link
G Itsn1 intersectin 1 is_active_in ISO (PMID:23633571) RGD PMID:23633571 NCBI chr11:30,978,590...31,160,645
Ensembl chr11:30,978,590...31,160,645 		JBrowse link
G Kcna1 potassium voltage-gated channel subfamily A member 1 is_active_in IDA PMID:14614103 SynGO PMID:14614103 RGD:13702408 NCBI chr 4:159,464,223...159,472,905
Ensembl chr 4:159,464,188...159,472,682 		JBrowse link
G Kcna2 potassium voltage-gated channel subfamily A member 2 is_active_in IDA
EXP
NAS		 PMID:14614103
PMID:12777451		 SynGO PMID:14614103 PMID:12777451 PMID:12777451 PMID:12777451 RGD:13702408, RGD:155230739, RGD:155230739, RGD:155230739 NCBI chr 2:194,704,555...194,718,387
Ensembl chr 2:194,704,639...194,718,400 		JBrowse link
G Kcna3 potassium voltage-gated channel subfamily A member 3 is_active_in IDA PMID:14614103 SynGO PMID:14614103 RGD:13702408 NCBI chr 2:194,632,106...194,634,059
Ensembl chr 2:194,632,196...194,650,138 		JBrowse link
G Kcnc1 potassium voltage-gated channel subfamily C member 1 is_active_in IDA PMID:14614103 SynGO PMID:14614103 RGD:13702408 NCBI chr 1:96,902,953...96,944,744
Ensembl chr 1:96,902,953...96,944,744 		JBrowse link
G Kcnc3 potassium voltage-gated channel subfamily C member 3 is_active_in ISO (PMID:33508244) RGD PMID:33508244 NCBI chr 1:95,080,960...95,095,165
Ensembl chr 1:95,080,960...95,095,160 		JBrowse link
G Kcnc4 potassium voltage-gated channel subfamily C member 4 is_active_in IDA PMID:14614103 SynGO PMID:14614103 RGD:13702408 NCBI chr 2:195,063,967...195,100,244
Ensembl chr 2:195,071,769...195,099,233 		JBrowse link
G Kcnk2 potassium two pore domain channel subfamily K member 2 IDA RGD PMID:15261098 RGD:9831118 NCBI chr13:100,766,101...100,963,435
Ensembl chr13:100,766,113...100,963,435 		JBrowse link
G Kcnq5 potassium voltage-gated channel subfamily Q member 5 is_active_in IDA
EXP		 PMID:17912742
PMID:21666672		 SynGO PMID:17912742 PMID:21666672 PMID:21666672 RGD:155230792, RGD:155230700, RGD:155230700 NCBI chr 9:23,830,185...24,395,984
Ensembl chr 9:23,833,087...24,394,704 		JBrowse link
G Ncs1 neuronal calcium sensor 1 is_active_in IMP
IDA		 PMID:11910115 SynGO PMID:11910115 PMID:11910115 RGD:13702284, RGD:13702284 NCBI chr 3:14,523,220...14,568,829
Ensembl chr 3:14,523,220...14,568,829 		JBrowse link
G Nos1 nitric oxide synthase 1 is_active_in ISO (PMID:19038221) RGD PMID:19038221 NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945 		JBrowse link
G Prkca protein kinase C, alpha is_active_in ISO (PMID:21658591) RGD PMID:21658591 NCBI chr10:92,889,390...93,288,013
Ensembl chr10:92,894,012...93,288,012 		JBrowse link
G Prkcb protein kinase C, beta located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:21658591)		 Ensembl
RGD		 PMID:21658591 GO_REF:0000107 NCBI chr 1:176,832,173...177,163,539
Ensembl chr 1:176,832,226...177,163,536 		JBrowse link
G Prkcg protein kinase C, gamma is_active_in ISO (PMID:24794094) RGD PMID:24794094 NCBI chr 1:65,832,851...65,860,676
Ensembl chr 1:65,832,855...65,859,384 		JBrowse link
G Rimbp2 RIMS binding protein 2 is_active_in ISO (PMID:26402606), (PMID:29967030) RGD PMID:26402606 PMID:29967030 NCBI chr12:27,747,615...27,946,256
Ensembl chr12:27,747,980...27,956,763 		JBrowse link
G Septin5 septin 5 is_active_in ISO (PMID:20624595) RGD PMID:20624595 NCBI chr11:82,373,601...82,379,393
Ensembl chr11:82,369,754...82,379,393 		JBrowse link
G Tprg1l tumor protein p63 regulated 1-like located_in
is_active_in		 IDA
IMP		 PMID:26212709 UniProt
SynGO		 PMID:26212709 PMID:26212709 PMID:26212709 RGD:13792549, RGD:13792549, RGD:13792549 NCBI chr 5:164,722,151...164,725,358
Ensembl chr 5:164,710,285...164,725,425 		JBrowse link
G Tspoap1 TSPO associated protein 1 located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:26402606)		 Ensembl
RGD		 PMID:26402606 GO_REF:0000107 NCBI chr10:72,554,220...72,586,402
Ensembl chr10:72,560,980...72,586,412 		JBrowse link
G Unc13a unc-13 homolog A is_active_in ISO (PMID:23658173) RGD PMID:23658173 NCBI chr16:18,333,910...18,381,813
Ensembl chr16:18,336,229...18,381,872 		JBrowse link
G Unc13b unc-13 homolog B is_active_in ISO (PMID:23658173) RGD PMID:23658173 NCBI chr 5:57,288,999...57,504,110
Ensembl chr 5:57,289,227...57,502,926 		JBrowse link
G Unc13c unc-13 homolog C located_in
is_active_in		 IEA
ISO		 GO_REF:0000107
(PMID:23658173)		 Ensembl
RGD		 PMID:23658173 GO_REF:0000107 NCBI chr 8:74,247,026...74,697,629
Ensembl chr 8:74,247,899...74,673,223 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      presynapse 885
        axon terminus 244
          calyx of Held 38
Path 2
Term Annotations click to browse term
  cellular_component 21392
    cellular anatomical entity 21234
      cell projection 2691
        plasma membrane bounded cell projection 2602
          neuron projection 1649
            axon 890
              distal axon 456
                axon terminus 244
                  calyx of Held 38
paths to the root