macromolecule metabolic process - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	macromolecule metabolic process	go back to main search page
Accession:	GO:0043170	browse the term
Definition:	The chemical reactions and pathways involving macromolecules, any molecule of high relative molecular mass, the structure of which essentially comprises the multiple repetition of units derived, actually or conceptually, from molecules of low relative molecular mass.
Synonyms:	exact_synonym:	biopolymer metabolic process; macromolecule metabolism
	alt_id:	GO:0043283

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activation of mitotic anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Plk1	polo-like kinase 1		ISO	1	181,002,811	181,012,741	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISS	1	181,002,811	181,012,741	RGD:1600115	UniProtKB
G	Pten	phosphatase and tensin homolog		ISO	1	236,771,027	236,837,261	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog		ISO	1	236,771,027	236,837,261	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog		IEA	1	236,771,027	236,837,261	RGD:1600115	ENSEMBL
G	Pten	phosphatase and tensin homolog		IEA	1	236,771,027	236,837,261	RGD:1600115	ENSEMBL
anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Anapc10	anaphase promoting complex subunit 10		IEA	19	30,041,566	30,093,688	RGD:1600115	InterPro
G	Anapc4	anaphase promoting complex subunit 4		IEA	14	62,879,772	62,911,465	RGD:1600115	InterPro
G	Cdc20	cell division cycle 20		ISO	5	138,913,180	138,916,744	RGD:1624291	RGD
G	Cdc20	cell division cycle 20		IEA	5	138,913,180	138,916,744	RGD:1600115	ENSEMBL
G	Cdc26	cell division cycle 26		IEA	5	79,390,026	79,403,683	RGD:1600115	InterPro
G	Cdc27	cell division cycle 27		IEA	10	93,678,790	93,725,987	RGD:1600115	InterPro
G	Fzr1	fizzy/cell division cycle 20 related 1 (Drosophila)		IEA	7	9,816,491	9,829,006	RGD:1600115	ENSEMBL
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		IEA	3	155,800,357	155,802,757	RGD:1600115	ENSEMBL
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
cellular polysaccharide biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ext1	exostosin glycosyltransferase 1		ISO	7	89,392,837	89,671,523	RGD:1624291	RGD
G	Ext2	exostosin glycosyltransferase 2		ISO	3	78,111,436	78,244,444	RGD:1624291	RGD
chitin catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chi3l1	chitinase 3-like 1 (cartilage glycoprotein-39)		IEA	13	47,139,658	47,147,591	RGD:1600115	InterPro
G	Chi3l3	chitinase 3-like 3		IEA	2	201,588,788	201,605,075	RGD:1600115	InterPro
G	Chia	chitinase, acidic		IDA	2	201,385,584	201,431,777	RGD:5000759	RGD
G	Chia	chitinase, acidic		IEA	2	201,385,584	201,431,777	RGD:1600115	InterPro
G	Chia	chitinase, acidic		ISO	2	201,385,584	201,431,777	RGD:1624291	RGD
G	Chia	chitinase, acidic		ISS	2	201,385,584	201,431,777	RGD:1600115	UniProtKB
G	Chid1	chitinase domain containing 1		IEA	1	201,683,719	201,718,785	RGD:1600115	InterPro
G	Chit1	chitinase 1 (chitotriosidase)		IEA	13	47,095,240	47,109,367	RGD:1600115	ENSEMBL
G	Chit1	chitinase 1 (chitotriosidase)		ISO	13	47,095,240	47,109,367	RGD:1624291	RGD
G	Ctbs	chitobiase, di-N-acetyl-		IDA	2	244,648,365	244,662,878	RGD:2301430	RGD
G	RGD1309110	similar to Hypothetical protein MGC58999		IEA	2	201,645,472	201,663,684	RGD:1600115	InterPro
chondroitin sulfate biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chst11	carbohydrate (chondroitin 4) sulfotransferase 11		ISO	7	22,721,892	22,950,084	RGD:1624291	RGD
G	Chst11	carbohydrate (chondroitin 4) sulfotransferase 11		ISO	7	22,721,892	22,950,084	RGD:1624291	RGD
G	Chst11	carbohydrate (chondroitin 4) sulfotransferase 11		ISO	7	22,721,892	22,950,084	RGD:1624291	RGD
G	Chst11	carbohydrate (chondroitin 4) sulfotransferase 11		IEA	7	22,721,892	22,950,084	RGD:1600115	ENSEMBL
G	Chst12	carbohydrate (chondroitin 4) sulfotransferase 12		ISO	12	14,577,440	14,579,051	RGD:1624291	RGD
G	Chst12	carbohydrate (chondroitin 4) sulfotransferase 12		IEA	12	14,577,440	14,579,051	RGD:1600115	ENSEMBL
G	Chst13	carbohydrate (chondroitin 4) sulfotransferase 13		IEA	4	124,571,623	124,584,842	RGD:1600115	ENSEMBL
G	Chst13	carbohydrate (chondroitin 4) sulfotransferase 13		ISO	4	124,571,623	124,584,842	RGD:1624291	RGD
G	Chst3	carbohydrate (chondroitin 6) sulfotransferase 3		ISO	20	27,480,448	27,482,990	RGD:1624291	RGD
G	Chst3	carbohydrate (chondroitin 6) sulfotransferase 3		ISO	20	27,480,448	27,482,990	RGD:1624291	RGD
G	Chst3	carbohydrate (chondroitin 6) sulfotransferase 3		IEA	20	27,480,448	27,482,990	RGD:1600115	ENSEMBL
G	Chst3	carbohydrate (chondroitin 6) sulfotransferase 3		IEA	20	27,480,448	27,482,990	RGD:1600115	ENSEMBL
G	Chst3	carbohydrate (chondroitin 6) sulfotransferase 3		ISO	20	27,480,448	27,482,990	RGD:1624291	RGD
G	Chst7	carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7		ISO	X	13,817,186	13,853,694	RGD:1624291	RGD
G	Chst7	carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7		IEA	X	13,817,186	13,853,694	RGD:1600115	ENSEMBL
G	Chsy1	chondroitin sulfate synthase 1		IEA	1	120,539,002	120,600,102	RGD:1600115	ENSEMBL
G	Chsy1	chondroitin sulfate synthase 1		ISO	1	120,539,002	120,600,102	RGD:1624291	RGD
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		IEA	16	22,852,516	22,947,139	RGD:1600115	ENSEMBL
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		ISO	16	22,852,516	22,947,139	RGD:1624291	RGD
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		ISO	16	22,852,516	22,947,139	RGD:1624291	RGD
G	Slc35d1	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1		IEA	5	124,107,948	124,154,018	RGD:1600115	ENSEMBL
G	Slc35d1	solute carrier family 35 (UDP-glucuronic acid/UDP-N-acetylgalactosamine dual transporter), member D1		ISO	5	124,107,948	124,154,018	RGD:1624291	RGD
G	Xylt1	xylosyltransferase 1		IEA	1	175,673,299	175,802,134	RGD:1600115	UniPathway
G	Xylt2	xylosyltransferase II		IEA	10	83,297,806	83,311,288	RGD:1600115	UniPathway
chondroitin sulfate metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chst11	carbohydrate (chondroitin 4) sulfotransferase 11		ISO	7	22,721,892	22,950,084	RGD:1624291	RGD
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		ISO	16	22,852,516	22,947,139	RGD:1624291	RGD
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		ISO	16	22,852,516	22,947,139	RGD:1624291	RGD
G	Impad1	inositol monophosphatase domain containing 1		ISO	5	18,086,121	18,109,691	RGD:1624291	RGD
G	Impad1	inositol monophosphatase domain containing 1		ISO	5	18,086,121	18,109,691	RGD:1624291	RGD
chondroitin sulfate proteoglycan biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	B3gat3	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)		IEA	1	211,597,624	211,604,142	RGD:1600115	ENSEMBL
G	B3gat3	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)		ISO	1	211,597,624	211,604,142	RGD:1624291	RGD
G	Csgalnact2	chondroitin sulfate N-acetylgalactosaminyltransferase 2		ISO	4	154,399,859	154,431,049	RGD:1624291	RGD
G	Csgalnact2	chondroitin sulfate N-acetylgalactosaminyltransferase 2		IEA	4	154,399,859	154,431,049	RGD:1600115	ENSEMBL
G	Csgalnact2	chondroitin sulfate N-acetylgalactosaminyltransferase 2		IEA	4	154,399,859	154,431,049	RGD:1600115	ENSEMBL
G	Csgalnact2	chondroitin sulfate N-acetylgalactosaminyltransferase 2		ISO	4	154,399,859	154,431,049	RGD:1624291	RGD
G	Cytl1	cytokine like 1		ISO	14	78,349,878	78,354,888	RGD:1624291	RGD
G	Cytl1	cytokine like 1		IEA	14	78,349,878	78,354,888	RGD:1600115	ENSEMBL
G	Igf1	insulin-like growth factor 1		ISO	7	24,531,669	24,605,742	RGD:1624291	RGD
G	Igf1	insulin-like growth factor 1		IEA	7	24,531,669	24,605,742	RGD:1600115	ENSEMBL
chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		IEA	16	22,852,516	22,947,139	RGD:1600115	ENSEMBL
G	Csgalnact1	chondroitin sulfate N-acetylgalactosaminyltransferase 1		ISO	16	22,852,516	22,947,139	RGD:1624291	RGD
cyclin catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cul3	cullin 3		IEA	9	79,574,062	79,634,396	RGD:1600115	ENSEMBL
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Fbxo31	F-box protein 31		ISS	19	51,836,918	51,837,223	RGD:1600115	UniProtKB
G	Fbxo31	F-box protein 31		ISO	19	51,836,918	51,837,223	RGD:1624291	RGD
G	RGD1305645	similar to RIKEN cDNA 1500015O10		ISO	9	42,931,051	42,950,605	RGD:1624291	RGD
G	RGD1305645	similar to RIKEN cDNA 1500015O10		IEA	9	42,931,051	42,950,605	RGD:1600115	ENSEMBL
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		IEA	3	155,800,357	155,802,757	RGD:1600115	ENSEMBL
deoxyhypusine biosynthetic process from spermidine
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Dhps	deoxyhypusine synthase		IDA	19	24,738,740	24,742,830	RGD:2316236	RGD
dermatan sulfate biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chst12	carbohydrate (chondroitin 4) sulfotransferase 12		ISO	12	14,577,440	14,579,051	RGD:1624291	RGD
G	Chst12	carbohydrate (chondroitin 4) sulfotransferase 12		IEA	12	14,577,440	14,579,051	RGD:1600115	ENSEMBL
G	Dse	dermatan sulfate epimerase		IEA	20	37,568,889	37,647,574	RGD:1600115	ENSEMBL
G	Dse	dermatan sulfate epimerase		ISO	20	37,568,889	37,647,574	RGD:1624291	RGD
ER-associated misfolded protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rnf5	ring finger protein 5, E3 ubiquitin protein ligase		ISO	20	4,248,002	4,250,448	RGD:1624291	RGD
G	Rnf5	ring finger protein 5, E3 ubiquitin protein ligase		IEA	20	4,248,002	4,250,448	RGD:1600115	ENSEMBL
ER-associated protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Amfr	autocrine motility factor receptor, E3 ubiquitin protein ligase		ISO	19	11,434,553	11,467,592	RGD:1624291	RGD
G	Amfr	autocrine motility factor receptor, E3 ubiquitin protein ligase		ISO	19	11,434,553	11,467,592	RGD:1624291	RGD
G	Derl1	derlin 1		ISO	7	94,573,472	94,596,148	RGD:1624291	RGD
G	Derl3	derlin 3		ISO	20	13,163,287	13,165,848	RGD:1624291	RGD
G	Dnajb2	DnaJ (Hsp40) homolog, subfamily B, member 2		ISO	9	74,517,647	74,525,857	RGD:1624291	RGD
G	Dnajb2	DnaJ (Hsp40) homolog, subfamily B, member 2		IEA	9	74,517,647	74,525,857	RGD:1600115	ENSEMBL
G	Dnajb9	DnaJ (Hsp40) homolog, subfamily B, member 9		ISO	6	63,583,033	63,587,247	RGD:1624291	RGD
G	Dnajb9	DnaJ (Hsp40) homolog, subfamily B, member 9		IEA	6	63,583,033	63,587,247	RGD:1600115	ENSEMBL
G	Dnajc10	DnaJ (Hsp40) homolog, subfamily C, member 10		ISO	3	63,145,016	63,185,201	RGD:1624291	RGD
G	Dnajc10	DnaJ (Hsp40) homolog, subfamily C, member 10		ISO	3	63,145,016	63,185,201	RGD:1624291	RGD
G	Dnajc10	DnaJ (Hsp40) homolog, subfamily C, member 10		IEA	3	63,145,016	63,185,201	RGD:1600115	ENSEMBL
G	Dnajc10	DnaJ (Hsp40) homolog, subfamily C, member 10		IEA	3	63,145,016	63,185,201	RGD:1600115	ENSEMBL
G	Edem1	ER degradation enhancer, mannosidase alpha-like 1		ISO	4	144,349,966	144,379,501	RGD:1624291	RGD
G	Edem1	ER degradation enhancer, mannosidase alpha-like 1		IEA	4	144,349,966	144,379,501	RGD:1600115	ENSEMBL
G	Erlin1	ER lipid raft associated 1		ISO	1	249,161,437	249,196,760	RGD:1624291	RGD
G	Erlin1	ER lipid raft associated 1		IEA	1	249,161,437	249,196,760	RGD:1600115	ENSEMBL
G	Erlin2	ER lipid raft associated 2		ISO	16	69,345,708	69,360,849	RGD:1624291	RGD
G	Erlin2	ER lipid raft associated 2		IEA	16	69,345,708	69,360,849	RGD:1600115	ENSEMBL
G	Fbxo2	F-box protein 2		ISO	5	165,239,080	165,244,509	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		IEA	5	165,239,080	165,244,509	RGD:1600115	ENSEMBL
G	Fbxo6	F-box protein 6		ISO	5	165,223,009	165,226,420	RGD:1624291	RGD
G	Fbxo6	F-box protein 6		ISS	5	165,223,009	165,226,420	RGD:1600115	UniProtKB
G	Foxred2	FAD-dependent oxidoreductase domain containing 2		IEA	7	115,861,724	115,874,209	RGD:1600115	ENSEMBL
G	Foxred2	FAD-dependent oxidoreductase domain containing 2		ISO	7	115,861,724	115,874,209	RGD:1624291	RGD
G	Hsp90b1	heat shock protein 90, beta, member 1		ISO	7	23,332,986	23,347,525	RGD:1624291	RGD
G	Hsp90b1	heat shock protein 90, beta, member 1		ISS	7	23,332,986	23,347,525	RGD:1600115	UniProtKB
G	Jkamp	JNK1/MAPK8-associated membrane protein		ISO	6	94,281,853	94,295,840	RGD:1624291	RGD
G	LOC100910823	derlin-2-like		IEA				RGD:1600115	ENSEMBL
G	LOC100910831	E3 ubiquitin-protein ligase synoviolin-like		IEA				RGD:1600115	ENSEMBL
G	Man1b1	mannosidase, alpha, class 1B, member 1		ISO	3	3,493,476	3,514,884	RGD:1624291	RGD
G	Man1b1	mannosidase, alpha, class 1B, member 1		IEA	3	3,493,476	3,514,884	RGD:1600115	ENSEMBL
G	Man1b1	mannosidase, alpha, class 1B, member 1		ISO	3	3,493,476	3,514,884	RGD:1624291	RGD
G	Os9	osteosarcoma amplified 9		ISO	7	67,046,802	67,073,355	RGD:1624291	RGD
G	Os9	osteosarcoma amplified 9		ISO	7	67,046,802	67,073,355	RGD:1624291	RGD
G	Os9	osteosarcoma amplified 9		ISO	7	67,046,802	67,073,355	RGD:1624291	RGD
G	Os9	osteosarcoma amplified 9		ISS	7	67,046,802	67,073,355	RGD:1600115	UniProtKB
G	Rhbdd1	rhomboid domain containing 1		ISO	9	81,685,464	81,778,714	RGD:1624291	RGD
G	Rhbdd1	rhomboid domain containing 1		ISS	9	81,685,464	81,778,714	RGD:1600115	UniProtKB
G	Rnf103	ring finger protein 103		ISO	4	104,762,184	104,778,157	RGD:1624291	RGD
G	Rnf103	ring finger protein 103		IEA	4	104,762,184	104,778,157	RGD:1600115	ENSEMBL
G	Sec61b	Sec61 beta subunit		ISO	5	64,096,869	64,105,082	RGD:1624291	RGD
G	Sec61b	Sec61 beta subunit		IEA	5	64,096,869	64,105,082	RGD:1600115	ENSEMBL
G	Stt3b	STT3B, subunit of the oligosaccharyltransferase complex (catalytic)		IEA	8	119,680,704	119,747,784	RGD:1600115	ENSEMBL
G	Stt3b	STT3B, subunit of the oligosaccharyltransferase complex (catalytic)		ISO	8	119,680,704	119,747,784	RGD:1624291	RGD
G	Syvn1	synovial apoptosis inhibitor 1, synoviolin		ISO	1	208,684,460	208,690,978	RGD:1624291	RGD
G	Syvn1	synovial apoptosis inhibitor 1, synoviolin		ISO	1	208,684,460	208,690,978	RGD:1624291	RGD
G	Tmem67	transmembrane protein 67		ISO	5	26,324,625	26,377,531	RGD:1624291	RGD
G	Tmem67	transmembrane protein 67		IEA	5	26,324,625	26,377,531	RGD:1600115	ENSEMBL
G	Trim13	tripartite motif-containing 13		ISO	15	40,743,520	40,752,138	RGD:1624291	RGD
G	Trim13	tripartite motif-containing 13		IEA	15	40,743,520	40,752,138	RGD:1600115	ENSEMBL
G	Ube2g2	ubiquitin-conjugating enzyme E2G 2		ISO	20	11,367,545	11,389,283	RGD:1624291	RGD
G	Ube2g2	ubiquitin-conjugating enzyme E2G 2		IEA	20	11,367,545	11,389,283	RGD:1600115	ENSEMBL
G	Ube2g2	ubiquitin-conjugating enzyme E2G 2		ISO	20	11,367,545	11,389,283	RGD:1624291	RGD
G	Usp19	ubiquitin specific peptidase 19		ISO				RGD:1624291	RGD
G	Usp19	ubiquitin specific peptidase 19		ISS				RGD:1600115	UniProtKB
G	Vcp	valosin-containing protein		ISS	5	59,472,100	59,491,508	RGD:1600115	UniProtKB
G	Vcp	valosin-containing protein		ISO	5	59,472,100	59,491,508	RGD:1624291	RGD
G	Vimp	VCP-interacting membrane protein		ISO	1	120,509,100	120,518,867	RGD:1624291	RGD
G	Vimp	VCP-interacting membrane protein		IEA	1	120,509,100	120,518,867	RGD:1600115	ENSEMBL
G	Wfs1	Wolfram syndrome 1 (wolframin)		ISO	14	79,379,680	79,404,003	RGD:1624291	RGD
G	Yod1	YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)		ISO	13	43,653,274	43,654,991	RGD:1624291	RGD
G	Yod1	YOD1 OTU deubiquinating enzyme 1 homolog (S. cerevisiae)		ISS	13	43,653,274	43,654,991	RGD:1600115	UniProtKB
extracellular polysaccharide biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	LOC682491	similar to methionine adenosyltransferase II, beta		IEA				RGD:1600115	InterPro
G	Mat2b	methionine adenosyltransferase II, beta		IEA	10	25,713,132	25,718,879	RGD:1600115	InterPro
fungal-type cell wall polysaccharide metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Myc	myelocytomatosis oncogene		IEP	7	98,953,142	98,958,060	RGD:7240696	RGD
glycogen biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Acadm	acyl-CoA dehydrogenase, C-4 to C-12 straight chain		ISO	2	251,866,645	251,890,729	RGD:1624291	RGD
G	Acadm	acyl-CoA dehydrogenase, C-4 to C-12 straight chain		IEA	2	251,866,645	251,890,729	RGD:1600115	ENSEMBL
G	Agl	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase		IEA	2	212,985,676	213,041,451	RGD:1600115	InterPro
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		IMP	6	137,640,482	137,657,552		UniProtKB
G	Akt2	v-akt murine thymoma viral oncogene homolog 2		IEA	1	82,686,233	82,726,544	RGD:1600115	UniProtKB
G	Gbe1	glucan (1,4-alpha-), branching enzyme 1		IDA	11	8,720,408	8,975,471	RGD:1642743	RGD
G	Gck	glucokinase		IDA	14	86,572,518	86,587,723	RGD:1581879	RGD
G	Gyg1	glycogenin 1		IDA	2	105,264,657	105,307,070	RGD:2303736	RGD
G	Gyg1	glycogenin 1		IDA	2	105,264,657	105,307,070	RGD:2304070	RGD
G	Gyg1	glycogenin 1		IEA	2	105,264,657	105,307,070	RGD:1600115	UniPathway
G	Gys1	glycogen synthase 1, muscle		ISO	1	95,907,458	95,928,150	RGD:1624291	RGD
G	Gys1	glycogen synthase 1, muscle		IDA	1	95,907,458	95,928,150	RGD:1642743	RGD
G	Gys1	glycogen synthase 1, muscle		IDA	1	95,907,458	95,928,150	RGD:2303748	RGD
G	Gys1	glycogen synthase 1, muscle		ISO	1	95,907,458	95,928,150	RGD:1624291	RGD
G	Gys1	glycogen synthase 1, muscle		IEA	1	95,907,458	95,928,150	RGD:1600115	UniPathway
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819	RGD:2304128	RGD
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819	RGD:1582633	RGD
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819	RGD:1642743	RGD
G	Gys2	glycogen synthase 2		ISO	4	179,984,036	180,018,819	RGD:1624291	RGD
G	Gys2	glycogen synthase 2		IEA	4	179,984,036	180,018,819	RGD:1600115	InterPro
G	Gys2	glycogen synthase 2		IEA	4	179,984,036	180,018,819	RGD:1600115	UniPathway
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819		UniProtKB
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819		UniProtKB
G	Pgm1	phosphoglucomutase 1		IBA	5	120,595,650	120,655,915	RGD:1600115	RefGenome
G	Pgm5	phosphoglucomutase 5		IBA	1	228,107,411	228,300,939	RGD:1600115	RefGenome
G	Phkg1	phosphorylase kinase, gamma 1		IEA	12	28,029,616	28,043,499	RGD:1600115	InterPro
G	Phkg2	phosphorylase kinase, gamma 2 (testis)		IEA	1	186,858,077	186,870,601	RGD:1600115	InterPro
G	Ppp1r3c	protein phosphatase 1, regulatory subunit 3C		ISO	1	240,991,884	240,996,887	RGD:1624291	RGD
G	Prkag3	protein kinase, AMP-activated, gamma 3 non-catalytic subunit		ISO	9	74,069,811	74,079,055	RGD:1624291	RGD
G	Prkag3	protein kinase, AMP-activated, gamma 3 non-catalytic subunit		IEA	9	74,069,811	74,079,055	RGD:1600115	ENSEMBL
G	Ptges3	prostaglandin E synthase 3 (cytosolic)		ISO	7	1,351,206	1,368,857	RGD:1624291	RGD
glycogen catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adrb1	adrenoceptor beta 1		IDA	1	263,025,655	263,027,055	RGD:5129142	RGD
G	Agl	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase		IDA	2	212,985,676	213,041,451	RGD:1642741	RGD
G	Agl	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase		IMP	2	212,985,676	213,041,451	RGD:1598779	RGD
G	Agl	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase		IMP	2	212,985,676	213,041,451	RGD:2304191	RGD
G	Agl	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase		IDA	2	212,985,676	213,041,451	RGD:1642743	RGD
G	Cps1	carbamoyl-phosphate synthetase 1		ISO	9	65,907,211	66,017,942	RGD:1624291	RGD
G	Cps1	carbamoyl-phosphate synthetase 1		IEA	9	65,907,211	66,017,942	RGD:1600115	ENSEMBL
G	G6pc	glucose-6-phosphatase, catalytic subunit		ISO	10	90,393,531	90,403,485	RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		IMP				RGD:1599504	RGD
G	Gaa	glucosidase, alpha, acid		IDA				RGD:1599506	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Pygb	phosphorylase, glycogen; brain		IDA	3	141,421,421	141,468,094	RGD:1642809	RGD
G	Pygb	phosphorylase, glycogen; brain		IDA	3	141,421,421	141,468,094	RGD:1642804	RGD
G	Pygb	phosphorylase, glycogen; brain		IDA	3	141,421,421	141,468,094	RGD:2304126	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:1642805	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:2304128	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:1642743	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:1642811	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:1599897	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:1599986	RGD
G	Pygm	phosphorylase, glycogen, muscle		ISO	1	209,166,701	209,181,588	RGD:1624291	RGD
G	Pygm	phosphorylase, glycogen, muscle		ISO	1	209,166,701	209,181,588	RGD:1624291	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:1642743	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:2304126	RGD
G	Pygm	phosphorylase, glycogen, muscle		IEA	1	209,166,701	209,181,588	RGD:1600115	ENSEMBL
glycogen metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Agl	amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase		ISO	2	212,985,676	213,041,451	RGD:1624291	RGD
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		ISO	6	137,640,482	137,657,552	RGD:1624291	RGD
G	Epm2a	epilepsy, progressive myoclonus type 2A		IEA				RGD:1600115	UniProtKB
G	G6pc	glucose-6-phosphatase, catalytic subunit		ISO	10	90,393,531	90,403,485	RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gaa	glucosidase, alpha, acid		ISO				RGD:1624291	RGD
G	Gnmt	glycine N-methyltransferase		ISO	9	10,127,092	10,130,444	RGD:1624291	RGD
G	Gsk3a	glycogen synthase kinase 3 alpha		IEA	1	80,505,517	80,514,139	RGD:1600115	UniProtKB
G	Gsk3b	glycogen synthase kinase 3 beta		ISO	11	64,284,731	64,428,698	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta		IEA	11	64,284,731	64,428,698	RGD:1600115	ENSEMBL
G	Gys1	glycogen synthase 1, muscle		IDA	1	95,907,458	95,928,150	RGD:2304186	RGD
G	Gys1	glycogen synthase 1, muscle		IDA	1	95,907,458	95,928,150	RGD:1642811	RGD
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819	RGD:2304113	RGD
G	Gys2	glycogen synthase 2		IDA	4	179,984,036	180,018,819	RGD:2304117	RGD
G	Il6st	interleukin 6 signal transducer		ISO	2	43,806,301	43,842,365	RGD:1624291	RGD
G	Il6st	interleukin 6 signal transducer		IEA	2	43,806,301	43,842,365	RGD:1600115	ENSEMBL
G	Pcdh12	protocadherin 12		ISO	18	31,197,338	31,212,869	RGD:1624291	RGD
G	Pcdh12	protocadherin 12		IEA	18	31,197,338	31,212,869	RGD:1600115	ENSEMBL
G	Phka1	phosphorylase kinase, alpha 1		IEA	X	90,553,527	90,692,073	RGD:1600115	InterPro
G	Phka1	phosphorylase kinase, alpha 1		IEA	X	90,553,527	90,692,073	RGD:1600115	UniPathway
G	Phka2	phosphorylase kinase, alpha 2		IEA	X	55,463,178	55,580,783	RGD:1600115	InterPro
G	Phkb	phosphorylase kinase, beta		IEA	19	22,373,355	22,561,509	RGD:1600115	InterPro
G	Phkg1	phosphorylase kinase, gamma 1		TAS	12	28,029,616	28,043,499	RGD:729579	RGD
G	Phkg1	phosphorylase kinase, gamma 1		IDA	12	28,029,616	28,043,499	RGD:2305955	RGD
G	Phkg1	phosphorylase kinase, gamma 1		IDA	12	28,029,616	28,043,499	RGD:2304176	RGD
G	Phkg2	phosphorylase kinase, gamma 2 (testis)		IDA	1	186,858,077	186,870,601	RGD:727546	RGD
G	Phkg2	phosphorylase kinase, gamma 2 (testis)		IDA	1	186,858,077	186,870,601	RGD:2304176	RGD
G	Ppp1ca	protein phosphatase 1, catalytic subunit, alpha isozyme		IEA	1	206,774,719	206,778,336	RGD:1600115	UniProtKB
G	Ppp1cb	protein phosphatase 1, catalytic subunit, beta isozyme		IEA	6	24,067,544	24,099,280	RGD:1600115	UniProtKB
G	Ppp1cc	protein phosphatase 1, catalytic subunit, gamma isozyme		IEA	12	35,580,169	35,598,249	RGD:1600115	UniProtKB
G	Ppp1r1a	protein phosphatase 1, regulatory (inhibitor) subunit 1A		IEA	7	142,428,730	142,436,381	RGD:1600115	UniProtKB
G	Ppp1r2	protein phosphatase 1, regulatory (inhibitor) subunit 2		IEA	11	71,319,294	71,342,716	RGD:1600115	UniProtKB
G	Ppp1r3b	protein phosphatase 1, regulatory subunit 3B		IEA	16	60,552,431	60,564,789	RGD:1600115	UniProtKB
G	Ppp1r3c	protein phosphatase 1, regulatory subunit 3C		ISO	1	240,991,884	240,996,887	RGD:1624291	RGD
G	Ppp1r3c	protein phosphatase 1, regulatory subunit 3C		IEA	1	240,991,884	240,996,887	RGD:1600115	UniProtKB
G	Ppp1r3d	protein phosphatase 1, regulatory subunit 3D		IEA	3	167,505,678	167,508,749	RGD:1600115	UniProtKB
G	Ppp1r3e	protein phosphatase 1, regulatory subunit 3E		IEA	15	32,974,172	32,975,332	RGD:1600115	UniProtKB
G	Prkag2	protein kinase, AMP-activated, gamma 2 non-catalytic subunit		ISO	4	5,620,992	5,667,438	RGD:1624291	RGD
G	Prkag2	protein kinase, AMP-activated, gamma 2 non-catalytic subunit		ISO	4	5,620,992	5,667,438	RGD:1624291	RGD
G	Prkag2	protein kinase, AMP-activated, gamma 2 non-catalytic subunit		IEA	4	5,620,992	5,667,438	RGD:1600115	ENSEMBL
G	Pygb	phosphorylase, glycogen; brain		IDA	3	141,421,421	141,468,094	RGD:2304136	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:2304113	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:2304115	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:2304117	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:2304136	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:1601233	RGD
G	Pygl	phosphorylase, glycogen, liver		ISO	6	92,298,339	92,341,347	RGD:1624291	RGD
G	Pygl	phosphorylase, glycogen, liver		IDA	6	92,298,339	92,341,347	RGD:2304119	RGD
G	Pygl	phosphorylase, glycogen, liver		ISO	6	92,298,339	92,341,347	RGD:1624291	RGD
G	Pygl	phosphorylase, glycogen, liver		ISO	6	92,298,339	92,341,347	RGD:1624291	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:2304186	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:2304119	RGD
G	Pygm	phosphorylase, glycogen, muscle		IDA	1	209,166,701	209,181,588	RGD:1642811	RGD
G	Slc37a4	solute carrier family 37 (glucose-6-phosphate transporter), member 4		NAS	8	47,363,896	47,369,981	RGD:61591	RGD
G	Slc37a4	solute carrier family 37 (glucose-6-phosphate transporter), member 4		ISO	8	47,363,896	47,369,981	RGD:1624291	RGD
G	Slc37a4	solute carrier family 37 (glucose-6-phosphate transporter), member 4		ISO	8	47,363,896	47,369,981	RGD:1624291	RGD
glycoprotein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adamts4	ADAM metallopeptidase with thrombospondin type 1 motif, 4		TAS	13	87,142,442	87,151,783	RGD:704367	RGD
G	Edem3	ER degradation enhancer, mannosidase alpha-like 3		ISO	13	66,653,931	66,712,432	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		ISO	5	165,239,080	165,244,509	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		ISO	5	165,239,080	165,244,509	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		IEA	5	165,239,080	165,244,509	RGD:1600115	ENSEMBL
G	Fbxo6	F-box protein 6		ISO	5	165,223,009	165,226,420	RGD:1624291	RGD
G	Fbxo6	F-box protein 6		IEA	5	165,223,009	165,226,420	RGD:1600115	ENSEMBL
G	Manba	mannosidase, beta A, lysosomal		ISO	2	232,983,989	233,077,788	RGD:1624291	RGD
G	Manba	mannosidase, beta A, lysosomal		IEA	2	232,983,989	233,077,788	RGD:1600115	ENSEMBL
G	Ngly1	N-glycanase 1		ISO	15	10,704,196	10,750,564	RGD:1624291	RGD
G	Ngly1	N-glycanase 1		ISO	15	10,704,196	10,750,564	RGD:1624291	RGD
G	Ngly1	N-glycanase 1		ISS	15	10,704,196	10,750,564	RGD:1600115	UniProtKB
G	Stt3b	STT3B, subunit of the oligosaccharyltransferase complex (catalytic)		IEA	8	119,680,704	119,747,784	RGD:1600115	ENSEMBL
G	Stt3b	STT3B, subunit of the oligosaccharyltransferase complex (catalytic)		ISO	8	119,680,704	119,747,784	RGD:1624291	RGD
glycosaminoglycan biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	B3galt6	UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6		ISO	5	172,833,647	172,835,783	RGD:1624291	RGD
G	B3galt6	UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6		IEA	5	172,833,647	172,835,783	RGD:1600115	ENSEMBL
G	B3galt6	UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6		IEA	5	172,833,647	172,835,783	RGD:1600115	ENSEMBL
G	B3galt6	UDP-Gal:betaGal beta 1,3-galactosyltransferase, polypeptide 6		ISO	5	172,833,647	172,835,783	RGD:1624291	RGD
G	B4galt7	xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7		ISO	17	15,059,958	15,068,556	RGD:1624291	RGD
G	B4galt7	xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7		ISS	17	15,059,958	15,068,556	RGD:1600115	UniProtKB
G	Ext1	exostosin glycosyltransferase 1		ISO	7	89,392,837	89,671,523	RGD:1624291	RGD
G	Ext1	exostosin glycosyltransferase 1		IEA	7	89,392,837	89,671,523	RGD:1600115	ENSEMBL
G	Ext2	exostosin glycosyltransferase 2		ISO	3	78,111,436	78,244,444	RGD:1624291	RGD
G	Glce	glucuronic acid epimerase		IEA	8	66,199,172	66,268,727	RGD:1600115	InterPro
G	Pdgfrb	platelet derived growth factor receptor, beta polypeptide		IMP	18	57,014,475	57,053,581	RGD:1581762	RGD
G	Xylt1	xylosyltransferase 1		IEA	1	175,673,299	175,802,134	RGD:1600115	InterPro
G	Xylt2	xylosyltransferase II		IEA	10	83,297,806	83,311,288	RGD:1600115	InterPro
glycosaminoglycan catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hyal2	hyaluronoglucosaminidase 2		ISO	8	112,817,001	112,820,693	RGD:1624291	RGD
G	Hyal2	hyaluronoglucosaminidase 2		ISS	8	112,817,001	112,820,693	RGD:1600115	UniProtKB
G	Hyal4	hyaluronoglucosaminidase 4		TAS	4	51,230,560	51,249,395	RGD:1331360	RGD
G	Idua	iduronidase, alpha-L-		IDA				RGD:1599427	RGD
G	Lyve1	lymphatic vessel endothelial hyaluronan receptor 1		ISO	1	168,601,460	168,622,234	RGD:1624291	RGD
G	Lyve1	lymphatic vessel endothelial hyaluronan receptor 1		IEA	1	168,601,460	168,622,234	RGD:1600115	ENSEMBL
glycosaminoglycan metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cln6	ceroid-lipofuscinosis, neuronal 6, late infantile, variant		IEA	8	66,987,057	67,002,013	RGD:1600115	ENSEMBL
G	Cln6	ceroid-lipofuscinosis, neuronal 6, late infantile, variant		ISO	8	66,987,057	67,002,013	RGD:1624291	RGD
G	Foxc1	forkhead box C1		ISO	17	39,026,186	39,030,163	RGD:1624291	RGD
G	Hexa	hexosaminidase A		ISO	8	63,363,219	63,388,146	RGD:1624291	RGD
G	Hexa	hexosaminidase A		IEA	8	63,363,219	63,388,146	RGD:1600115	ENSEMBL
G	Hexb	hexosaminidase B		ISO	2	27,649,188	27,672,231	RGD:1624291	RGD
G	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1		ISO	18	56,638,891	56,677,831	RGD:1624291	RGD
heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ext1	exostosin glycosyltransferase 1		ISO	7	89,392,837	89,671,523	RGD:1624291	RGD
G	Ext1	exostosin glycosyltransferase 1		IEA	7	89,392,837	89,671,523	RGD:1600115	ENSEMBL
G	Ext2	exostosin glycosyltransferase 2		ISO	3	78,111,436	78,244,444	RGD:1624291	RGD
G	Hs2st1	heparan sulfate 2-O-sulfotransferase 1		ISO	2	242,622,270	242,760,095	RGD:1624291	RGD
G	Hs2st1	heparan sulfate 2-O-sulfotransferase 1		IEA	2	242,622,270	242,760,095	RGD:1600115	ENSEMBL
heparan sulfate proteoglycan catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Gpc1	glypican 1		ISO				RGD:1624291	RGD
G	Gpc1	glypican 1		ISS				RGD:1600115	UniProtKB
G	Gpc1	glypican 1		IEA				RGD:1600115	ENSEMBL
G	Hpse	heparanase		IEA	14	10,144,322	10,185,115	RGD:1600115	ENSEMBL
G	Hpse	heparanase		ISO	14	10,144,322	10,185,115	RGD:1624291	RGD
G	Hpse	heparanase		ISS	14	10,144,322	10,185,115	RGD:1600115	UniProtKB
heparin biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Angpt1	angiopoietin 1		ISO	7	78,195,504	78,451,471	RGD:1624291	RGD
G	Glce	glucuronic acid epimerase		ISO	8	66,199,172	66,268,727	RGD:1624291	RGD
G	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1		IEA	18	56,638,891	56,677,831	RGD:1600115	UniPathway
heparin metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hs2st1	heparan sulfate 2-O-sulfotransferase 1		ISO	2	242,622,270	242,760,095	RGD:1624291	RGD
G	Hs2st1	heparan sulfate 2-O-sulfotransferase 1		IEA	2	242,622,270	242,760,095	RGD:1600115	ENSEMBL
hyaluronan biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ccnd3	cyclin D3		IMP				RGD:2316018	RGD
G	Has1	hyaluronan synthase 1		IMP	1	56,503,365	56,516,133	RGD:1302357	RGD
G	Has1	hyaluronan synthase 1		ISO	1	56,503,365	56,516,133	RGD:1624291	RGD
G	Has2	hyaluronan synthase 2		ISO	7	93,230,135	93,256,139	RGD:1624291	RGD
G	Has2	hyaluronan synthase 2		ISO	7	93,230,135	93,256,139	RGD:1624291	RGD
G	Has2	hyaluronan synthase 2		IEA	7	93,230,135	93,256,139	RGD:1600115	UniPathway
G	Has2	hyaluronan synthase 2		IEP	7	93,230,135	93,256,139		UniProtKB
G	Has3	hyaluronan synthase 3		ISO	19	36,718,156	36,727,586	RGD:1624291	RGD
G	Has3	hyaluronan synthase 3		ISO	19	36,718,156	36,727,586	RGD:1624291	RGD
G	Has3	hyaluronan synthase 3		IEA	19	36,718,156	36,727,586	RGD:1600115	InterPro
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		IEA	8	112,824,562	112,826,875	RGD:1600115	ENSEMBL
G	Hyal1	hyaluronoglucosaminidase 1		ISS	8	112,824,562	112,826,875	RGD:1600115	UniProtKB
G	Il1b	interleukin 1 beta		ISO	3	116,964,422	116,970,867	RGD:1624291	RGD
G	Il1b	interleukin 1 beta		IEA	3	116,964,422	116,970,867	RGD:1600115	ENSEMBL
hyaluronan catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cd44	Cd44 molecule		ISO	3	88,022,962	88,110,352	RGD:1624291	RGD
G	Cd44	Cd44 molecule		IEA	3	88,022,962	88,110,352	RGD:1600115	ENSEMBL
G	Fgf2	fibroblast growth factor 2		ISO	2	123,893,314	123,947,136	RGD:1624291	RGD
G	Fgf2	fibroblast growth factor 2		IEA	2	123,893,314	123,947,136	RGD:1600115	ENSEMBL
G	Hyal1	hyaluronoglucosaminidase 1		IDA	8	112,824,562	112,826,875	RGD:1304530	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		IEA	8	112,824,562	112,826,875	RGD:1600115	ENSEMBL
G	Hyal2	hyaluronoglucosaminidase 2		ISO	8	112,817,001	112,820,693	RGD:1624291	RGD
G	Hyal2	hyaluronoglucosaminidase 2		ISO	8	112,817,001	112,820,693	RGD:1624291	RGD
G	Hyal2	hyaluronoglucosaminidase 2		ISO	8	112,817,001	112,820,693	RGD:1624291	RGD
G	Hyal2	hyaluronoglucosaminidase 2		ISO	8	112,817,001	112,820,693	RGD:1624291	RGD
G	Hyal2	hyaluronoglucosaminidase 2		IEA	8	112,817,001	112,820,693	RGD:1600115	ENSEMBL
G	Hyal2	hyaluronoglucosaminidase 2		IDA	8	112,817,001	112,820,693		UniProtKB
G	Hyal3	hyaluronoglucosaminidase 3		ISO	8	112,828,150	112,833,785	RGD:1624291	RGD
G	Hyal3	hyaluronoglucosaminidase 3		ISO	8	112,828,150	112,833,785	RGD:1624291	RGD
G	Hyal3	hyaluronoglucosaminidase 3		IEA	8	112,828,150	112,833,785	RGD:1600115	ENSEMBL
G	Tgfb1	transforming growth factor, beta 1		ISO	1	80,894,705	80,911,020	RGD:1624291	RGD
G	Tgfb1	transforming growth factor, beta 1		ISS	1	80,894,705	80,911,020	RGD:1600115	UniProtKB
hyaluronan metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		IEP	6	137,640,482	137,657,552	RGD:7243103	RGD
G	Has2	hyaluronan synthase 2		ISO	7	93,230,135	93,256,139	RGD:1624291	RGD
G	Hgf	hepatocyte growth factor		IEP	4	14,864,357	14,932,513	RGD:7243103	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		ISS	8	112,824,562	112,826,875	RGD:1600115	UniProtKB
G	Il15	interleukin 15		IDA	19	27,487,268	27,498,973	RGD:5013835	RGD
G	Itih1	inter-alpha trypsin inhibitor, heavy chain 1		IEA	16	6,364,102	6,378,251	RGD:1600115	InterPro
G	Itih3	inter-alpha trypsin inhibitor, heavy chain 3		IEA	16	6,341,043	6,358,767	RGD:1600115	InterPro
G	Itih4	inter-alpha-trypsin inhibitor heavy chain family, member 4		IEA	16	6,319,608	6,334,782	RGD:1600115	InterPro
G	Kdr	kinase insert domain receptor		IEP				RGD:7243103	RGD
G	LOC100912775	inter-alpha-trypsin inhibitor heavy chain H6-like		IEA				RGD:1600115	InterPro
G	Mki67	antigen identified by monoclonal antibody Ki-67		IEP	1	195,310,027	195,336,224	RGD:7243103	RGD
G	Pim1	pim-1 oncogene		IEP	20	7,817,403	7,821,800	RGD:7243103	RGD
G	Vegfa	vascular endothelial growth factor A		IEP	9	10,520,730	10,536,071	RGD:7243103	RGD
inhibition of mitotic anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Fbxo5	F-box protein 5		IEA	1	36,492,134	36,498,503	RGD:1600115	ENSEMBL
G	Fbxo5	F-box protein 5		ISO	1	36,492,134	36,498,503	RGD:1624291	RGD
keratan sulfate biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chst5	carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5		ISO	19	41,830,419	41,850,686	RGD:1624291	RGD
G	Chst5	carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 5		IEA	19	41,830,419	41,850,686	RGD:1600115	ENSEMBL
keratan sulfate catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Gns	glucosamine (N-acetyl)-6-sulfatase		IDA	7	60,672,492	60,702,306	RGD:1600571	RGD
keratan sulfate metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chst1	carbohydrate (keratan sulfate Gal-6) sulfotransferase 1		ISO	3	76,994,089	77,008,874	RGD:1624291	RGD
G	Chst1	carbohydrate (keratan sulfate Gal-6) sulfotransferase 1		IEA	3	76,994,089	77,008,874	RGD:1600115	ENSEMBL
lipopolysaccharide biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cercam	cerebral endothelial cell adhesion molecule		IEA	3	8,854,774	8,871,400	RGD:1600115	InterPro
G	Cmas	cytidine monophosphate N-acetylneuraminic acid synthetase		IEA	4	180,650,927	180,669,243	RGD:1600115	InterPro
G	Colgalt1	collagen beta(1-O)galactosyltransferase 1		IEA	16	18,810,962	18,823,237	RGD:1600115	InterPro
G	Colgalt2	collagen beta(1-O)galactosyltransferase 2		IEA	13	67,354,323	67,459,514	RGD:1600115	InterPro
G	Gne	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase		IEA	5	60,506,171	60,536,403	RGD:1600115	InterPro
G	LOC685619	similar to TP53-regulating kinase (p53-related protein kinase) (Nori-2)		IEA	3	156,539,432	156,542,459	RGD:1600115	InterPro
G	Tp53rk	TP53 regulating kinase		IEA	3	157,949,564	157,953,323	RGD:1600115	InterPro
lipopolysaccharide metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Aoah	acyloxyacyl hydrolase (neutrophil)		ISO	17	51,475,254	51,722,447	RGD:1624291	RGD
lipoprotein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Apob	apolipoprotein B		ISO	6	31,508,060	31,548,083	RGD:1624291	RGD
G	Apob	apolipoprotein B		IEA	6	31,508,060	31,548,083	RGD:1600115	ENSEMBL
G	Apoe	apolipoprotein E		ISO	1	79,003,634	79,006,387	RGD:1624291	RGD
G	Apoe	apolipoprotein E		IEA	1	79,003,634	79,006,387	RGD:1600115	ENSEMBL
G	Atm	ataxia telangiectasia mutated		ISO	8	56,894,746	56,996,565	RGD:1624291	RGD
G	Atm	ataxia telangiectasia mutated		IEA	8	56,894,746	56,996,565	RGD:1600115	ENSEMBL
G	Ldlr	low density lipoprotein receptor		ISO	8	20,824,040	20,846,920	RGD:1624291	RGD
G	Ldlr	low density lipoprotein receptor		ISO	8	20,824,040	20,846,920	RGD:1624291	RGD
G	Ldlr	low density lipoprotein receptor		ISO	8	20,824,040	20,846,920	RGD:1624291	RGD
G	Ldlr	low density lipoprotein receptor		IEA	8	20,824,040	20,846,920	RGD:1600115	ENSEMBL
negative regulation of cyclin catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Atraid	all-trans retinoic acid-induced differentiation factor		IEA	6	25,296,435	25,300,992	RGD:1600115	ENSEMBL
G	Atraid	all-trans retinoic acid-induced differentiation factor		ISO	6	25,296,435	25,300,992	RGD:1624291	RGD
G	Dab2ip	DAB2 interacting protein		ISO	3	14,667,700	14,840,625	RGD:1624291	RGD
G	Dab2ip	DAB2 interacting protein		ISS	3	14,667,700	14,840,625	RGD:1600115	UniProtKB
G	Nell1	NEL-like 1 (chicken)		IEA	1	99,805,922	100,758,002	RGD:1600115	ENSEMBL
G	Nell1	NEL-like 1 (chicken)		ISO	1	99,805,922	100,758,002	RGD:1624291	RGD
G	Nell1	NEL-like 1 (chicken)		ISS	1	99,805,922	100,758,002	RGD:1600115	UniProtKB
negative regulation of elastin catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cst3	cystatin C		ISO	3	137,650,903	137,654,776	RGD:1624291	RGD
G	Cst3	cystatin C		IEA	3	137,650,903	137,654,776	RGD:1600115	ENSEMBL
negative regulation of glycogen biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Enpp1	ectonucleotide pyrophosphatase/phosphodiesterase 1		ISO	1	21,223,678	21,287,411	RGD:1624291	RGD
G	Enpp1	ectonucleotide pyrophosphatase/phosphodiesterase 1		IEA	1	21,223,678	21,287,411	RGD:1600115	ENSEMBL
G	Gfpt1	glutamine fructose-6-phosphate transaminase 1		IMP	4	121,204,274	121,250,160	RGD:1625425	RGD
G	Grb10	growth factor receptor bound protein 10		IDA	14	92,814,797	92,911,442		BHF-UCL
G	Inpp5k	inositol polyphosphate-5-phosphatase K		ISO	10	62,953,425	62,971,016	RGD:1624291	RGD
G	Inpp5k	inositol polyphosphate-5-phosphatase K		ISO	10	62,953,425	62,971,016	RGD:1624291	RGD
G	Pask	PAS domain containing serine/threonine kinase		ISO	9	92,582,177	92,623,004	RGD:1624291	RGD
G	Pask	PAS domain containing serine/threonine kinase		IEA	9	92,582,177	92,623,004	RGD:1600115	ENSEMBL
negative regulation of glycogen catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adra1b	adrenoceptor alpha 1B		ISO	10	28,889,092	28,946,889	RGD:1624291	RGD
G	Ins2	insulin 2		ISO	1	202,935,548	202,936,379	RGD:1624291	RGD
negative regulation of hyaluronan biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Tgfb1	transforming growth factor, beta 1		ISO	1	80,894,705	80,911,020	RGD:1624291	RGD
G	Tgfb1	transforming growth factor, beta 1		ISS	1	80,894,705	80,911,020	RGD:1600115	UniProtKB
negative regulation of low-density lipoprotein particle receptor catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Furin	furin (paired basic amino acid cleaving enzyme)		ISO	1	136,209,969	136,222,057	RGD:1624291	RGD
G	Furin	furin (paired basic amino acid cleaving enzyme)		IEA	1	136,209,969	136,222,057	RGD:1600115	ENSEMBL
negative regulation of membrane protein ectodomain proteolysis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Il10	interleukin 10		ISO	13	43,953,900	43,957,766	RGD:1624291	RGD
G	Il10	interleukin 10		ISS	13	43,953,900	43,957,766	RGD:1600115	UniProtKB
G	Ptpn3	protein tyrosine phosphatase, non-receptor type 3		ISO	5	75,106,880	75,222,735	RGD:1624291	RGD
G	Ptpn3	protein tyrosine phosphatase, non-receptor type 3		IEA	5	75,106,880	75,222,735	RGD:1600115	ENSEMBL
G	Timp1	TIMP metallopeptidase inhibitor 1		ISO	X	12,542,496	12,547,094	RGD:1624291	RGD
G	Timp1	TIMP metallopeptidase inhibitor 1		IEA	X	12,542,496	12,547,094	RGD:1600115	ENSEMBL
G	Timp3	TIMP metallopeptidase inhibitor 3		ISO	7	19,677,144	19,727,072	RGD:1624291	RGD
G	Timp3	TIMP metallopeptidase inhibitor 3		IEA	7	19,677,144	19,727,072	RGD:1600115	ENSEMBL
negative regulation of mitotic anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast)		ISO	4	96,380,039	96,386,042	RGD:1624291	RGD
G	Mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast)		IEA	4	96,380,039	96,386,042	RGD:1600115	ENSEMBL
G	Mad2l2	MAD2 mitotic arrest deficient-like 2 (yeast)		ISS	5	165,218,362	165,222,828	RGD:1600115	UniProtKB
G	Usp44	ubiquitin specific peptidase 44		IEA	7	30,898,472	30,971,342	RGD:1600115	ENSEMBL
negative regulation of proteasomal protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Gabarapl2	GABA(A) receptor-associated protein like 2		ISO	19	41,880,238	41,891,074	RGD:1624291	RGD
negative regulation of proteasomal ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bag6	BCL2-associated athanogene 6		ISO	20	3,739,593	3,752,311	RGD:1624291	RGD
G	Bag6	BCL2-associated athanogene 6		ISS	20	3,739,593	3,752,311	RGD:1600115	UniProtKB
G	Fhit	fragile histidine triad		ISO	15	15,823,461	17,329,184	RGD:1624291	RGD
G	Fhit	fragile histidine triad		ISS	15	15,823,461	17,329,184	RGD:1600115	UniProtKB
G	Gipc1	GIPC PDZ domain containing family, member 1		ISO	19	26,165,658	26,177,206	RGD:1624291	RGD
G	Gipc1	GIPC PDZ domain containing family, member 1		IEA	19	26,165,658	26,177,206	RGD:1600115	ENSEMBL
G	Hsp90ab1	heat shock protein 90 alpha (cytosolic), class B member 1		ISO	9	11,033,496	11,038,868	RGD:1624291	RGD
G	Hsp90ab1	heat shock protein 90 alpha (cytosolic), class B member 1		IEA	9	11,033,496	11,038,868	RGD:1600115	ENSEMBL
G	N4bp1	Nedd4 binding protein 1		ISO	19	21,560,480	21,607,541	RGD:1624291	RGD
G	N4bp1	Nedd4 binding protein 1		IEA	19	21,560,480	21,607,541	RGD:1600115	ENSEMBL
G	Senp1	SUMO1/sentrin specific peptidase 1		IEA	7	136,746,791	136,808,933	RGD:1600115	ENSEMBL
G	Senp1	SUMO1/sentrin specific peptidase 1		ISO	7	136,746,791	136,808,933	RGD:1624291	RGD
G	Shh	sonic hedgehog		ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Shh	sonic hedgehog		IEA	4	2,200,504	2,209,657	RGD:1600115	ENSEMBL
G	Taf9	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	2	31,454,557	31,466,611	RGD:1624291	RGD
G	Tlk2	tousled-like kinase 2		IEA	10	94,583,881	94,675,624	RGD:1600115	ENSEMBL
G	Tlk2	tousled-like kinase 2		ISO	10	94,583,881	94,675,624	RGD:1624291	RGD
G	Ubxn1	UBX domain protein 1		ISO	1	211,541,002	211,544,682	RGD:1624291	RGD
G	Ubxn1	UBX domain protein 1		ISS	1	211,541,002	211,544,682	RGD:1600115	UniProtKB
negative regulation of protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Agap2	ArfGAP with GTPase domain, ankyrin repeat and PH domain 2		ISO	7	67,031,300	67,043,909	RGD:1624291	RGD
G	Banp	Btg3 associated nuclear protein		ISO	19	52,193,660	52,268,521	RGD:1624291	RGD
G	Banp	Btg3 associated nuclear protein		IEA	19	52,193,660	52,268,521	RGD:1600115	ENSEMBL
G	Dedd	death effector domain-containing		ISO	13	87,238,315	87,241,703	RGD:1624291	RGD
G	Dedd	death effector domain-containing		IEA	13	87,238,315	87,241,703	RGD:1600115	ENSEMBL
G	Egfr	epidermal growth factor receptor		ISO	14	97,617,358	97,788,211	RGD:1624291	RGD
G	Egfr	epidermal growth factor receptor		IEA	14	97,617,358	97,788,211	RGD:1600115	ENSEMBL
G	Fbxo43	F-box protein 43		ISO	7	71,670,329	71,683,901	RGD:1624291	RGD
G	Fbxo43	F-box protein 43		IEA	7	71,670,329	71,683,901	RGD:1600115	ENSEMBL
G	Flna	filamin A, alpha		ISO	X	160,362,334	160,385,626	RGD:1624291	RGD
G	Flna	filamin A, alpha		IEA	X	160,362,334	160,385,626	RGD:1600115	ENSEMBL
G	Fyn	FYN oncogene related to SRC, FGR, YES		ISO	20	43,501,853	43,695,567	RGD:1624291	RGD
G	Fyn	FYN oncogene related to SRC, FGR, YES		IEA	20	43,501,853	43,695,567	RGD:1600115	ENSEMBL
G	Grin2a	glutamate receptor, ionotropic, N-methyl D-aspartate 2A		ISO	10	5,588,229	6,004,780	RGD:1624291	RGD
G	Grin2a	glutamate receptor, ionotropic, N-methyl D-aspartate 2A		IEA	10	5,588,229	6,004,780	RGD:1600115	ENSEMBL
G	Grin2c	glutamate receptor, ionotropic, N-methyl D-aspartate 2C		ISO	10	105,323,371	105,340,976	RGD:1624291	RGD
G	Grin2c	glutamate receptor, ionotropic, N-methyl D-aspartate 2C		IEA	10	105,323,371	105,340,976	RGD:1600115	ENSEMBL
G	Ins2	insulin 2		ISO	1	202,935,548	202,936,379	RGD:1624291	RGD
G	Irak3	interleukin-1 receptor-associated kinase 3		ISO	7	59,408,198	59,467,821	RGD:1624291	RGD
G	Irak3	interleukin-1 receptor-associated kinase 3		IEA	7	59,408,198	59,467,821	RGD:1600115	ENSEMBL
G	Irak3	interleukin-1 receptor-associated kinase 3		ISO	7	59,408,198	59,467,821	RGD:1624291	RGD
G	Irak3	interleukin-1 receptor-associated kinase 3		ISO	7	59,408,198	59,467,821	RGD:1624291	RGD
G	Mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast)		ISO	4	96,380,039	96,386,042	RGD:1624291	RGD
G	Mad2l2	MAD2 mitotic arrest deficient-like 2 (yeast)		ISS	5	165,218,362	165,222,828	RGD:1600115	UniProtKB
G	Mdm4	Mdm4 p53 binding protein homolog (mouse)		ISO	13	45,895,832	45,931,421	RGD:1624291	RGD
G	Mdm4	Mdm4 p53 binding protein homolog (mouse)		IEA	13	45,895,832	45,931,421	RGD:1600115	ENSEMBL
G	Nos2	nitric oxide synthase 2, inducible		ISO	10	65,036,884	65,072,453	RGD:1624291	RGD
G	Nrg1	neuregulin 1		ISO	16	63,937,796	64,126,183	RGD:1624291	RGD
G	Nrg1	neuregulin 1		IEA	16	63,937,796	64,126,183	RGD:1600115	ENSEMBL
G	Prkcg	protein kinase C, gamma		ISO	1	64,145,749	64,172,712	RGD:1624291	RGD
G	Prkcg	protein kinase C, gamma		IEA	1	64,145,749	64,172,712	RGD:1600115	ENSEMBL
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		ISO	1	208,262,669	208,273,148	RGD:1624291	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		IEA	1	208,262,669	208,273,148	RGD:1600115	ENSEMBL
G	Serpine2	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2		ISO	9	79,091,414	79,166,330	RGD:1624291	RGD
G	Serpine2	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2		ISO	9	79,091,414	79,166,330	RGD:1624291	RGD
G	Serpine2	serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2		IEA	9	79,091,414	79,166,330	RGD:1600115	ENSEMBL
G	Shh	sonic hedgehog		ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Smad3	SMAD family member 3		ISO	8	67,803,909	67,952,056	RGD:1624291	RGD
G	Smad3	SMAD family member 3		IEA	8	67,803,909	67,952,056	RGD:1600115	ENSEMBL
G	Smad4	SMAD family member 4		ISO	18	70,432,705	70,461,541	RGD:1624291	RGD
peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bgn	biglycan		ISO	X	159,380,557	159,393,409	RGD:1624291	RGD
G	Bgn	biglycan		IEA	X	159,380,557	159,393,409	RGD:1600115	ENSEMBL
G	Dcn	decorin		ISO	7	35,004,234	35,045,191	RGD:1624291	RGD
G	Dcn	decorin		IEA	7	35,004,234	35,045,191	RGD:1600115	ENSEMBL
G	Egflam	EGF-like, fibronectin type III and laminin G domains		ISO	2	56,493,064	56,666,659	RGD:1624291	RGD
G	Egflam	EGF-like, fibronectin type III and laminin G domains		IEA	2	56,493,064	56,666,659	RGD:1600115	ENSEMBL
G	Prss34	protease, serine, 34		ISO	10	14,546,640	14,548,397	RGD:1624291	RGD
G	Prss34	protease, serine, 34		IEA	10	14,546,640	14,548,397	RGD:1600115	ENSEMBL
G	Spock2	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2		ISO	20	27,397,527	27,425,914	RGD:1624291	RGD
G	Spock3	sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3		ISO	16	29,337,211	29,751,950	RGD:1624291	RGD
peptidoglycan catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	LOC100910070	lysozyme g-like protein 1-like		IEA				RGD:1600115	InterPro
G	LOC100910179	peptidoglycan recognition protein 4-like		IEA				RGD:1600115	InterPro
G	LOC100910813	lysozyme g-like protein 2-like		IEA				RGD:1600115	InterPro
G	LOC299567	similar to Peptidoglycan recognition protein-like		IEA				RGD:1600115	InterPro
G	LOC299567	similar to Peptidoglycan recognition protein-like		IEA				RGD:1600115	InterPro
G	LOC687320	similar to peptidoglycan recognition protein 2		IEA				RGD:1600115	InterPro
G	Lyg1	lysozyme G-like 1		IEA	9	36,886,224	36,897,973	RGD:1600115	InterPro
G	Lyg2	lysozyme G-like 2		IEA	9	36,855,293	36,868,603	RGD:1600115	InterPro
G	Pglyrp1	peptidoglycan recognition protein 1		IEA	1	78,235,474	78,240,665	RGD:1600115	InterPro
G	Pglyrp3	peptidoglycan recognition protein 3		IEA	2	184,874,939	184,884,692	RGD:1600115	InterPro
G	Pglyrp3b	peptidoglycan recognition protein 3b		IEA	2	184,563,872	184,583,270	RGD:1600115	InterPro
G	Pglyrp4	peptidoglycan recognition protein 4		IEA	2	183,015,945	183,038,181	RGD:1600115	InterPro
poly-N-acetyllactosamine biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	B3gnt1	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1		ISO	1	207,659,039	207,661,261	RGD:1624291	RGD
G	B3gnt8	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8		IEA	1	80,834,562	80,837,461	RGD:1600115	ENSEMBL
G	B3gnt8	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8		ISO	1	80,834,562	80,837,461	RGD:1624291	RGD
polyamine biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Azin1	antizyme inhibitor 1		IEA	7	74,159,130	74,189,447	RGD:1600115	UniProtKB
G	Azin1	antizyme inhibitor 1		IEA	7	74,159,130	74,189,447	RGD:1600115	InterPro
G	RGD1562036	similar to ornithine decarboxylase		IEA	5	149,237,466	149,248,532	RGD:1600115	UniProtKB
G	RGD1562036	similar to ornithine decarboxylase		IEA	5	149,237,466	149,248,532	RGD:1600115	InterPro
polyamine catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Paox	polyamine oxidase (exo-N4-amino)		ISO	1	199,909,816	199,934,938	RGD:1624291	RGD
G	Paox	polyamine oxidase (exo-N4-amino)		ISO	1	199,909,816	199,934,938	RGD:1624291	RGD
G	Smox	spermine oxidase		ISO	3	119,240,376	119,254,370	RGD:1624291	RGD
polyamine metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Amd1	adenosylmethionine decarboxylase 1		IDA	20	44,452,475	44,468,111	RGD:1578320	RGD
G	Odc1	ornithine decarboxylase 1		IDA	6	41,309,211	41,315,796	RGD:1578320	RGD
G	Odc1	ornithine decarboxylase 1		IMP	6	41,309,211	41,315,796	RGD:7242932	RGD
G	Sat1	spermidine/spermine N1-acetyl transferase 1		IDA	X	61,634,964	61,638,247	RGD:1599544	RGD
G	Sat1	spermidine/spermine N1-acetyl transferase 1		IMP	X	61,634,964	61,638,247	RGD:7242932	RGD
polysaccharide biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1		ISO	18	56,638,891	56,677,831	RGD:1624291	RGD
G	Ndst1	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1		IEA	18	56,638,891	56,677,831	RGD:1600115	ENSEMBL
polysaccharide catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chia	chitinase, acidic		IEA	2	201,385,584	201,431,777	RGD:1600115	UniProtKB
polysaccharide metabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Egfr	epidermal growth factor receptor		IEP	14	97,617,358	97,788,211	RGD:5131635	RGD
G	Mmp1	matrix metallopeptidase 1 (interstitial collagenase)		IEP	8	4,333,773	4,354,284	RGD:7207373	RGD
G	Tyms	thymidylate synthetase		IEP	9	112,604,912	112,617,706	RGD:5133449	RGD
positive regulation of glycogen biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		ISO	6	137,640,482	137,657,552	RGD:1624291	RGD
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		IEA	6	137,640,482	137,657,552	RGD:1600115	ENSEMBL
G	Akt2	v-akt murine thymoma viral oncogene homolog 2		ISO	1	82,686,233	82,726,544	RGD:1624291	RGD
G	C1qtnf2	C1q and tumor necrosis factor related protein 2		ISO	10	28,571,051	28,588,714	RGD:1624291	RGD
G	C1qtnf2	C1q and tumor necrosis factor related protein 2		IEA	10	28,571,051	28,588,714	RGD:1600115	ENSEMBL
G	Dyrk2	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2		ISO	7	58,114,127	58,126,547	RGD:1624291	RGD
G	Dyrk2	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2		IEA	7	58,114,127	58,126,547	RGD:1600115	ENSEMBL
G	Gck	glucokinase		ISO	14	86,572,518	86,587,723	RGD:1624291	RGD
G	Gck	glucokinase		ISS	14	86,572,518	86,587,723	RGD:1600115	UniProtKB
G	Igf1	insulin-like growth factor 1		ISO	7	24,531,669	24,605,742	RGD:1624291	RGD
G	Igf1	insulin-like growth factor 1		IEA	7	24,531,669	24,605,742	RGD:1600115	ENSEMBL
G	Igf1	insulin-like growth factor 1		ISS	7	24,531,669	24,605,742	RGD:1600115	UniProtKB
G	Igf2	insulin-like growth factor 2		ISO	1	202,906,624	202,915,231	RGD:1624291	RGD
G	Igf2	insulin-like growth factor 2		IEA	1	202,906,624	202,915,231	RGD:1600115	ENSEMBL
G	Ins2	insulin 2		ISO	1	202,935,548	202,936,379	RGD:1624291	RGD
G	Insr	insulin receptor		ISO	12	2,934,967	3,087,691	RGD:1624291	RGD
G	Insr	insulin receptor		ISO	12	2,934,967	3,087,691	RGD:1624291	RGD
G	Insr	insulin receptor		IEA	12	2,934,967	3,087,691	RGD:1600115	ENSEMBL
G	Insr	insulin receptor		IEA	12	2,934,967	3,087,691	RGD:1600115	ENSEMBL
G	Irs1	insulin receptor substrate 1		ISO	9	81,585,251	81,638,071	RGD:1624291	RGD
G	Irs1	insulin receptor substrate 1		IEA	9	81,585,251	81,638,071	RGD:1600115	ENSEMBL
G	Irs2	insulin receptor substrate 2		ISO	16	83,379,987	83,404,220	RGD:1624291	RGD
G	Ppp1r3g	protein phosphatase 1, regulatory subunit 3G		ISO	17	35,177,316	35,178,359	RGD:1624291	RGD
G	Pth	parathyroid hormone		ISO	1	171,240,596	171,243,528	RGD:1624291	RGD
G	Pth	parathyroid hormone		ISS	1	171,240,596	171,243,528	RGD:1600115	UniProtKB
G	Sorbs1	sorbin and SH3 domain containing 1		ISO	1	245,419,532	245,527,846	RGD:1624291	RGD
positive regulation of glycogen catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adra1b	adrenoceptor alpha 1B		ISO	10	28,889,092	28,946,889	RGD:1624291	RGD
G	Avpr1a	arginine vasopressin receptor 1A		NAS	7	62,225,537	62,229,461	RGD:1298691	UniProtKB
G	Hmgb1	high mobility group box 1		ISO				RGD:1624291	RGD
positive regulation of hyaluronan biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Egf	epidermal growth factor		ISO	2	227,103,900	227,195,062	RGD:1624291	RGD
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1		ISO	2	233,091,013	233,187,501	RGD:1624291	RGD
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1		IEA	2	233,091,013	233,187,501	RGD:1600115	ENSEMBL
G	Pdgfb	platelet-derived growth factor beta polypeptide		ISO	7	118,244,385	118,262,021	RGD:1624291	RGD
G	Pdgfb	platelet-derived growth factor beta polypeptide		IEA	7	118,244,385	118,262,021	RGD:1600115	ENSEMBL
G	Pdgfb	platelet-derived growth factor beta polypeptide		ISS	7	118,244,385	118,262,021	RGD:1600115	UniProtKB
positive regulation of low-density lipoprotein particle receptor catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Apoe	apolipoprotein E		ISO	1	79,003,634	79,006,387	RGD:1624291	RGD
G	Apoe	apolipoprotein E		IEA	1	79,003,634	79,006,387	RGD:1600115	ENSEMBL
positive regulation of proteasomal protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Dab2ip	DAB2 interacting protein		ISO	3	14,667,700	14,840,625	RGD:1624291	RGD
G	Dab2ip	DAB2 interacting protein		ISS	3	14,667,700	14,840,625	RGD:1600115	UniProtKB
G	Osbpl7	oxysterol binding protein-like 7		ISO	10	85,771,941	85,789,490	RGD:1624291	RGD
positive regulation of proteasomal ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		ISO	6	137,640,482	137,657,552	RGD:1624291	RGD
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		IEA	6	137,640,482	137,657,552	RGD:1600115	ENSEMBL
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		IEA	10	15,409,373	15,462,726	RGD:1600115	ENSEMBL
G	Clu	clusterin		ISO	15	45,365,779	45,405,314	RGD:1624291	RGD
G	Clu	clusterin		IEA	15	45,365,779	45,405,314	RGD:1600115	ENSEMBL
G	Clu	clusterin		ISS	15	45,365,779	45,405,314	RGD:1600115	UniProtKB
G	Csnk1d	casein kinase 1, delta		ISO	10	110,166,244	110,197,233	RGD:1624291	RGD
G	Csnk1d	casein kinase 1, delta		ISS	10	110,166,244	110,197,233	RGD:1600115	UniProtKB
G	Csnk1e	casein kinase 1, epsilon		ISO	7	117,402,718	117,420,764	RGD:1624291	RGD
G	Csnk1e	casein kinase 1, epsilon		IEA	7	117,402,718	117,420,764	RGD:1600115	ENSEMBL
G	Dnajb2	DnaJ (Hsp40) homolog, subfamily B, member 2		ISO	9	74,517,647	74,525,857	RGD:1624291	RGD
G	Dnajb2	DnaJ (Hsp40) homolog, subfamily B, member 2		IEA	9	74,517,647	74,525,857	RGD:1600115	ENSEMBL
G	Dvl1	dishevelled, dsh homolog 1 (Drosophila)		ISO	5	172,705,951	172,717,626	RGD:1624291	RGD
G	Dvl1	dishevelled, dsh homolog 1 (Drosophila)		IEA	5	172,705,951	172,717,626	RGD:1600115	ENSEMBL
G	Fbxo22	F-box protein 22		ISO	8	58,751,584	58,767,613	RGD:1624291	RGD
G	Fbxo22	F-box protein 22		IEA	8	58,751,584	58,767,613	RGD:1600115	ENSEMBL
G	Gclc	glutamate-cysteine ligase, catalytic subunit		ISO	8	82,724,429	82,762,848	RGD:1624291	RGD
G	Gclc	glutamate-cysteine ligase, catalytic subunit		IEA	8	82,724,429	82,762,848	RGD:1600115	ENSEMBL
G	Gnb2l1	guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1		ISO	10	34,067,237	34,072,593	RGD:1624291	RGD
G	Gnb2l1	guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1		ISS	10	34,067,237	34,072,593	RGD:1600115	UniProtKB
G	Hspbp1	HSPA binding protein, cytoplasmic cochaperone 1		ISO	1	67,882,356	67,905,766	RGD:1624291	RGD
G	Hspbp1	HSPA binding protein, cytoplasmic cochaperone 1		IEA	1	67,882,356	67,905,766	RGD:1600115	ENSEMBL
G	LOC100911959	ubiquitin carboxyl-terminal hydrolase 5-like		IEA				RGD:1600115	ENSEMBL
G	Lrrk2	leucine-rich repeat kinase 2		ISO	7	130,105,902	130,267,747	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		IEA	7	56,996,694	57,020,926	RGD:1600115	ENSEMBL
G	Nkd2	naked cuticle homolog 2 (Drosophila)		IEA	1	30,252,093	30,278,933	RGD:1600115	ENSEMBL
G	Nkd2	naked cuticle homolog 2 (Drosophila)		ISO	1	30,252,093	30,278,933	RGD:1624291	RGD
G	Nub1	negative regulator of ubiquitin-like proteins 1		ISO	4	5,820,488	5,850,809	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISO	1	181,002,811	181,012,741	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISS	1	181,002,811	181,012,741	RGD:1600115	UniProtKB
G	Plk2	polo-like kinase 2		IMP	2	41,800,745	41,806,503	RGD:7241135	RGD
G	Prickle1	prickle homolog 1 (Drosophila)		ISO	7	131,967,220	131,986,187	RGD:1624291	RGD
G	Prickle1	prickle homolog 1 (Drosophila)		IEA	7	131,967,220	131,986,187	RGD:1600115	ENSEMBL
G	Psen1	presenilin 1		ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Psen1	presenilin 1		IEA	6	107,737,543	107,776,357	RGD:1600115	ENSEMBL
G	Psen2	presenilin 2		ISO	13	95,934,674	95,951,836	RGD:1624291	RGD
G	Psmd10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10		ISO				RGD:1624291	RGD
G	Psmd10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10		ISS				RGD:1600115	UniProtKB
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		ISO	14	17,683,377	17,698,982	RGD:1624291	RGD
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		IEA	14	17,683,377	17,698,982	RGD:1600115	ENSEMBL
G	Rnf180	ring finger protein 180		ISO	2	36,186,010	36,253,660	RGD:1624291	RGD
G	Rnf180	ring finger protein 180		IEA	2	36,186,010	36,253,660	RGD:1600115	ENSEMBL
G	Smad7	SMAD family member 7		ISO	18	72,294,803	72,323,354	RGD:1624291	RGD
G	Smad7	SMAD family member 7		IEA	18	72,294,803	72,323,354	RGD:1600115	ENSEMBL
G	Socs5	suppressor of cytokine signaling 5		ISO	6	10,552,177	10,582,783	RGD:1624291	RGD
G	Socs5	suppressor of cytokine signaling 5		IEA	6	10,552,177	10,582,783	RGD:1600115	ENSEMBL
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		IEA	10	15,096,150	15,098,431	RGD:1600115	ENSEMBL
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Sumo1	SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)		ISO	9	58,212,538	58,242,760	RGD:1624291	RGD
G	Sumo1	SMT3 suppressor of mif two 3 homolog 1 (S. cerevisiae)		IEA	9	58,212,538	58,242,760	RGD:1600115	ENSEMBL
G	Taf1	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	X	89,590,556	89,666,569	RGD:1624291	RGD
G	Trib1	tribbles homolog 1 (Drosophila)		ISO	7	96,442,239	96,448,785	RGD:1624291	RGD
G	Trib1	tribbles homolog 1 (Drosophila)		IEA	7	96,442,239	96,448,785	RGD:1600115	ENSEMBL
G	Trib2	tribbles homolog 2 (Drosophila)		IEA	6	39,474,243	39,496,718	RGD:1600115	ENSEMBL
G	Ube2v2	ubiquitin-conjugating enzyme E2 variant 2		IMP	11	87,215,842	87,249,726	RGD:1299567	RGD
G	Usp5	ubiquitin specific peptidase 5 (isopeptidase T)		ISO	4	160,937,706	160,952,769	RGD:1624291	RGD
G	Usp5	ubiquitin specific peptidase 5 (isopeptidase T)		IEA	4	160,937,706	160,952,769	RGD:1600115	ENSEMBL
G	Vcp	valosin-containing protein		IMP	5	59,472,100	59,491,508	RGD:1599730	RGD
G	Vcp	valosin-containing protein		ISO	5	59,472,100	59,491,508	RGD:1624291	RGD
positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Plk3	polo-like kinase 3		ISO	5	137,443,540	137,448,715	RGD:1624291	RGD
G	Plk3	polo-like kinase 3		ISS	5	137,443,540	137,448,715	RGD:1600115	UniProtKB
positive regulation of protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Apc	adenomatous polyposis coli		ISO	18	26,732,147	26,790,383	RGD:1624291	RGD
G	Apc	adenomatous polyposis coli		ISO	18	26,732,147	26,790,383	RGD:1624291	RGD
G	Atg4b	autophagy related 4B, cysteine peptidase		IMP	9	93,054,736	93,063,888	RGD:2301238	RGD
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Cblb	Cbl proto-oncogene, E3 ubiquitin protein ligase B		ISO	11	49,690,402	49,856,762	RGD:1624291	RGD
G	Cdkn1b	cyclin-dependent kinase inhibitor 1B		ISO	4	171,841,705	171,846,506	RGD:1624291	RGD
G	Crebrf	CREB3 regulatory factor		IEA	10	16,665,420	16,723,929	RGD:1600115	ENSEMBL
G	Crebrf	CREB3 regulatory factor		ISO	10	16,665,420	16,723,929	RGD:1624291	RGD
G	Csnk2a1	casein kinase 2, alpha 1 polypeptide		ISO	3	142,564,754	142,609,311	RGD:1624291	RGD
G	Cul4b	cullin 4B		ISO	X	6,800,506	6,838,023	RGD:1624291	RGD
G	Cul4b	cullin 4B		IEA	X	6,800,506	6,838,023	RGD:1600115	ENSEMBL
G	Fzr1	fizzy/cell division cycle 20 related 1 (Drosophila)		IEA	7	9,816,491	9,829,006	RGD:1600115	ENSEMBL
G	Gga3	golgi associated, gamma adaptin ear containing, ARF binding protein 3		ISO	10	105,665,476	105,684,513	RGD:1624291	RGD
G	Gja1	gap junction protein, alpha 1		IDA	20	35,409,815	35,422,262	RGD:1582696	RGD
G	Gpc3	glypican 3		ISO	X	139,192,115	139,560,649	RGD:1624291	RGD
G	Ier3	immediate early response 3		ISO	20	3,076,568	3,077,772	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Lpcat1	lysophosphatidylcholine acyltransferase 1		ISO	1	30,573,254	30,624,147	RGD:1624291	RGD
G	Mapk15	mitogen-activated protein kinase 15		IMP	7	114,026,694	114,032,007	RGD:2304230	RGD
G	Mylip	myosin regulatory light chain interacting protein		IEA	17	25,308,147	25,329,887	RGD:1600115	ENSEMBL
G	Ndfip1	Nedd4 family interacting protein 1		ISO	18	31,351,538	31,401,736	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Osbpl7	oxysterol binding protein-like 7		IEA	10	85,771,941	85,789,490	RGD:1600115	ENSEMBL
G	Ppp2r3a	protein phosphatase 2, regulatory subunit B'', alpha		IEA	8	106,061,334	106,155,090	RGD:1600115	ENSEMBL
G	Rhbdd1	rhomboid domain containing 1		ISO	9	81,685,464	81,778,714	RGD:1624291	RGD
G	Sgsm3	small G protein signaling modulator 3		ISO	7	119,259,355	119,306,023	RGD:1624291	RGD
G	Sgsm3	small G protein signaling modulator 3		IEA	7	119,259,355	119,306,023	RGD:1600115	ENSEMBL
G	Snx1	sorting nexin 1		IMP	8	70,370,336	70,408,991	RGD:68866	RGD
G	Sox17	SRY (sex determining region Y)-box 17		ISO	5	15,241,405	15,246,904	RGD:1624291	RGD
G	Sox9	SRY (sex determining region Y)-box 9		IDA	10	102,392,187	102,394,256	RGD:2290270	MGI
G	Trim32	tripartite motif-containing 32		ISO	5	82,380,439	82,391,290	RGD:1624291	RGD
G	Trim32	tripartite motif-containing 32		ISO	5	82,380,439	82,391,290	RGD:1624291	RGD
G	Vcp	valosin-containing protein		ISO	5	59,472,100	59,491,508	RGD:1624291	RGD
G	Vcp	valosin-containing protein		ISO	5	59,472,100	59,491,508	RGD:1624291	RGD
G	Vip	vasoactive intestinal peptide		ISO	1	36,361,513	36,369,594	RGD:1624291	RGD
G	Vip	vasoactive intestinal peptide		ISO	1	36,361,513	36,369,594	RGD:1624291	RGD
G	Wnt5a	wingless-type MMTV integration site family, member 5A		ISO	16	3,782,025	3,799,625	RGD:1624291	RGD
positive regulation of spermidine biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Paox	polyamine oxidase (exo-N4-amino)		IEA	1	199,909,816	199,934,938	RGD:1600115	ENSEMBL
G	Paox	polyamine oxidase (exo-N4-amino)		ISO	1	199,909,816	199,934,938	RGD:1624291	RGD
proteasomal protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Pmaip1	phorbol-12-myristate-13-acetate-induced protein 1		ISO	18	62,914,845	62,918,832	RGD:1624291	RGD
G	Pmaip1	phorbol-12-myristate-13-acetate-induced protein 1		IEA	18	62,914,845	62,918,832	RGD:1600115	ENSEMBL
G	Socs6	suppressor of cytokine signaling 6		ISO	18	85,722,868	85,725,214	RGD:1624291	RGD
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		ISO	4	149,529,396	149,536,289	RGD:1624291	RGD
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		IEA	4	149,529,396	149,536,289	RGD:1600115	ENSEMBL
proteasomal ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Agap3	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3		ISO	4	6,038,279	6,064,813	RGD:1624291	RGD
G	Agap3	ArfGAP with GTPase domain, ankyrin repeat and PH domain 3		IEA	4	6,038,279	6,064,813	RGD:1600115	ENSEMBL
G	Arrb1	arrestin, beta 1		ISO	1	156,871,564	156,937,540	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		ISO	10	57,244,071	57,284,166	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		IEA	10	57,244,071	57,284,166	RGD:1600115	ENSEMBL
G	Atxn3	ataxin 3		ISO	6	126,196,043	126,229,844	RGD:1624291	RGD
G	Atxn3	ataxin 3		ISS	6	126,196,043	126,229,844	RGD:1600115	UniProtKB
G	Birc2	baculoviral IAP repeat-containing 2		ISO	8	4,649,559	4,667,733	RGD:1624291	RGD
G	Birc2	baculoviral IAP repeat-containing 2		IEA	8	4,649,559	4,667,733	RGD:1600115	ENSEMBL
G	Cd2ap	CD2-associated protein		IDA	9	13,827,015	13,888,338	RGD:1302417	RGD
G	Cdc34	cell division cycle 34		ISO	7	11,534,543	11,539,941	RGD:1624291	RGD
G	Cdc34	cell division cycle 34		ISO	7	11,534,543	11,539,941	RGD:1624291	RGD
G	Crbn	cereblon		ISO	4	142,135,935	142,154,730	RGD:1624291	RGD
G	Crbn	cereblon		ISS	4	142,135,935	142,154,730	RGD:1600115	UniProtKB
G	Cul3	cullin 3		ISS	9	79,574,062	79,634,396	RGD:1600115	UniProtKB
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Ddb1	damage-specific DNA binding protein 1, 127kDa		ISO	1	213,095,187	213,120,986	RGD:1624291	RGD
G	Ddb1	damage-specific DNA binding protein 1, 127kDa		IEA	1	213,095,187	213,120,986	RGD:1600115	ENSEMBL
G	Ddb1	damage-specific DNA binding protein 1, 127kDa		ISS	1	213,095,187	213,120,986	RGD:1600115	UniProtKB
G	Ddit3	DNA-damage inducible transcript 3		ISO	7	67,247,749	67,252,571	RGD:1624291	RGD
G	Ddit3	DNA-damage inducible transcript 3		IEA	7	67,247,749	67,252,571	RGD:1600115	ENSEMBL
G	Ddit3	DNA-damage inducible transcript 3		ISS	7	67,247,749	67,252,571	RGD:1600115	UniProtKB
G	Edem3	ER degradation enhancer, mannosidase alpha-like 3		ISO	13	66,653,931	66,712,432	RGD:1624291	RGD
G	Ercc8	excision repair cross-complementing rodent repair deficiency, complementation group 8		IEA	2	39,382,976	39,420,764	RGD:1600115	ENSEMBL
G	Fbxl3	F-box and leucine-rich repeat protein 3		ISO	15	87,093,141	87,113,003	RGD:1624291	RGD
G	Fbxw11	F-box and WD repeat domain containing 11		ISO	10	17,502,480	17,600,199	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		ISO	3	3,673,918	3,677,876	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		ISS	3	3,673,918	3,677,876	RGD:1600115	UniProtKB
G	Kctd10	potassium channel tetramerization domain containing 10		ISS				RGD:1600115	UniProtKB
G	Kctd13	potassium channel tetramerisation domain containing 13		ISO	1	186,104,306	186,122,853	RGD:1624291	RGD
G	Kctd13	potassium channel tetramerisation domain containing 13		IEA	1	186,104,306	186,122,853	RGD:1600115	ENSEMBL
G	Klhl20	kelch-like family member 20		ISS	13	76,655,800	76,700,630	RGD:1600115	UniProtKB
G	Klhl20	kelch-like family member 20		ISO	13	76,655,800	76,700,630	RGD:1624291	RGD
G	Klhl42	kelch-like family, member 42		ISO	4	184,688,926	184,709,859	RGD:1624291	RGD
G	LOC682704	similar to CG7220-PA, isoform A		ISS				RGD:1600115	UniProtKB
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISO	3	58,366,693	58,394,116	RGD:1624291	RGD
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISS	3	58,366,693	58,394,116	RGD:1600115	UniProtKB
G	Nhlrc1	NHL repeat containing 1		ISO	17	23,726,054	23,727,244	RGD:1624291	RGD
G	Nhlrc1	NHL repeat containing 1		ISS	17	23,726,054	23,727,244	RGD:1600115	UniProtKB
G	Nploc4	nuclear protein localization 4 homolog (S. cerevisiae)		IEA	10	109,809,121	109,878,278	RGD:1600115	UniPathway
G	Pcbp2	poly(rC) binding protein 2		ISO	7	141,232,766	141,253,910	RGD:1624291	RGD
G	Pcbp2	poly(rC) binding protein 2		IEA	7	141,232,766	141,253,910	RGD:1600115	ENSEMBL
G	Pcnp	PEST proteolytic signal containing nuclear protein		ISO	11	45,572,442	45,580,616	RGD:1624291	RGD
G	Pcnp	PEST proteolytic signal containing nuclear protein		ISS	11	45,572,442	45,580,616	RGD:1600115	HGNC
G	Pml	promyelocytic leukemia		ISO	8	62,020,438	62,051,927	RGD:1624291	RGD
G	Ppp2cb	protein phosphatase 2, catalytic subunit, beta isozyme		ISO	16	62,330,513	62,351,968	RGD:1624291	RGD
G	Ppp2cb	protein phosphatase 2, catalytic subunit, beta isozyme		IEA	16	62,330,513	62,351,968	RGD:1600115	ENSEMBL
G	Ppp2r5c	protein phosphatase 2, regulatory subunit B', gamma		ISO	6	135,204,405	135,299,068	RGD:1624291	RGD
G	Psmb5	proteasome (prosome, macropain) subunit, beta type 5		ISO	15	32,689,859	32,694,364	RGD:1624291	RGD
G	Psmb5	proteasome (prosome, macropain) subunit, beta type 5		IEA	15	32,689,859	32,694,364	RGD:1600115	ENSEMBL
G	Psmc5	proteasome (prosome, macropain) 26S subunit, ATPase, 5		ISO	10	95,650,987	95,656,921	RGD:1624291	RGD
G	Psmc5	proteasome (prosome, macropain) 26S subunit, ATPase, 5		ISS	10	95,650,987	95,656,921	RGD:1600115	UniProtKB
G	Psmd12	proteasome (prosome, macropain) 26S subunit, non-ATPase, 12		ISS	10	96,881,373	96,907,258	RGD:1556506	RGD
G	Rad23a	RAD23 homolog A (S. cerevisiae)		IEA	19	24,971,070	24,976,901	RGD:1600115	InterPro
G	Rad23b	RAD23 homolog B (S. cerevisiae)		IEA	5	73,256,542	73,294,296	RGD:1600115	InterPro
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISO	3	142,644,156	142,660,799	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		IEA	7	119,794,976	119,805,104	RGD:1600115	ENSEMBL
G	RGD1309823	similar to hypothetical protein FLJ21156		IEA	5	137,300,780	137,310,153	RGD:1600115	ENSEMBL
G	Rnf187	ring finger protein 187		ISS	10	45,221,784	45,227,683	RGD:1600115	UniProtKB
G	Rnf187	ring finger protein 187		ISO	10	45,221,784	45,227,683	RGD:1624291	RGD
G	Rnf216	ring finger protein 216		ISO	12	11,850,549	11,968,127	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		ISO	14	82,092,024	82,112,036	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		ISO	14	82,092,024	82,112,036	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		ISO	14	82,092,024	82,112,036	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		ISS	14	82,092,024	82,112,036	RGD:1600115	UniProtKB
G	Siah1a	seven in absentia 1A		ISO	19	21,717,141	21,740,751	RGD:1624291	RGD
G	Siah1a	seven in absentia 1A		ISS	19	21,717,141	21,740,751	RGD:1600115	UniProtKB
G	Sirt1	sirtuin 1		IEA	20	25,675,302	25,686,494	RGD:1600115	ENSEMBL
G	Sirt1	sirtuin 1		ISO	20	25,675,302	25,686,494	RGD:1624291	RGD
G	Sirt2	sirtuin 2		ISO	1	83,873,578	83,896,121	RGD:1624291	RGD
G	Sirt2	sirtuin 2		ISS	1	83,873,578	83,896,121	RGD:1600115	UniProtKB
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		IEA	12	9,950,304	10,042,391	RGD:1600115	ENSEMBL
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Spop	speckle-type POZ protein		ISO	10	84,099,990	84,185,130	RGD:1624291	RGD
G	Spopl	speckle-type POZ protein-like		ISO	3	1,518,951	1,579,141	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		IEA	10	15,096,150	15,098,431	RGD:1600115	ENSEMBL
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Tbl1x	transducin (beta)-like 1 X-linked		ISO	X	63,310,560	63,392,534	RGD:1624291	RGD
G	Tbl1x	transducin (beta)-like 1 X-linked		IEA	X	63,310,560	63,392,534	RGD:1600115	ENSEMBL
G	Tbl1xr1	transducin (beta)-like 1 X-linked receptor 1		ISO	2	107,561,415	107,688,872	RGD:1624291	RGD
G	Tbl1xr1	transducin (beta)-like 1 X-linked receptor 1		IEA	2	107,561,415	107,688,872	RGD:1600115	ENSEMBL
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)		ISO	10	64,632,189	64,646,879	RGD:1624291	RGD
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)		ISS	10	64,632,189	64,646,879	RGD:1600115	UniProtKB
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		IEA	5	57,663,121	57,676,619	RGD:1600115	ENSEMBL
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		ISO	5	57,663,121	57,676,619	RGD:1624291	RGD
G	Trim13	tripartite motif-containing 13		ISO	15	40,743,520	40,752,138	RGD:1624291	RGD
G	Trim63	tripartite motif containing 63, E3 ubiquitin protein ligase		ISO	5	153,059,573	153,073,907	RGD:1624291	RGD
G	Trim63	tripartite motif containing 63, E3 ubiquitin protein ligase		IEA	5	153,059,573	153,073,907	RGD:1600115	ENSEMBL
G	Trim9	tripartite motif-containing 9		ISO	6	92,358,509	92,457,863	RGD:1624291	RGD
G	Trim9	tripartite motif-containing 9		ISS	6	92,358,509	92,457,863	RGD:1600115	UniProtKB
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		IEA	10	37,509,322	37,523,900	RGD:1600115	ENSEMBL
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISS	2	232,943,214	232,971,022	RGD:1600115	UniProtKB
G	Ube2i	ubiquitin-conjugating enzyme E2I		IMP	10	14,509,948	14,524,551	RGD:730030	RGD
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
G	Ufd1l	ubiquitin fusion degradation 1 like (yeast)		IEA				RGD:1600115	UniPathway
G	Usp44	ubiquitin specific peptidase 44		IEA	7	30,898,472	30,971,342	RGD:1600115	ENSEMBL
G	Wwp1	WW domain containing E3 ubiquitin protein ligase 1		ISO	5	34,238,505	34,325,951	RGD:1624291	RGD
G	Wwp1	WW domain containing E3 ubiquitin protein ligase 1		ISO	5	34,238,505	34,325,951	RGD:1624291	RGD
G	Wwp1	WW domain containing E3 ubiquitin protein ligase 1		IEA	5	34,238,505	34,325,951	RGD:1600115	ENSEMBL
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Znrf1	zinc and ring finger 1, E3 ubiquitin protein ligase		ISO	19	41,455,386	41,537,955	RGD:1624291	RGD
G	Znrf1	zinc and ring finger 1, E3 ubiquitin protein ligase		IEA	19	41,455,386	41,537,955	RGD:1600115	ENSEMBL
proteasomal ubiquitin-independent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Enc1	ectodermal-neural cortex 1		ISO	2	27,720,805	27,733,168	RGD:1624291	RGD
G	Keap1	Kelch-like ECH-associated protein 1		ISO	8	20,259,178	20,266,351	RGD:1624291	RGD
G	Keap1	Kelch-like ECH-associated protein 1		ISS	8	20,259,178	20,266,351	RGD:1600115	UniProtKB
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISO	3	58,366,693	58,394,116	RGD:1624291	RGD
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISS	3	58,366,693	58,394,116	RGD:1600115	UniProtKB
protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Acy1	aminoacylase 1		TAS	8	111,576,888	111,581,571	RGD:1578377	RGD
G	Afg3l1	AFG3(ATPase family gene 3)-like 1 (S. cerevisiae)		IEA	19	53,794,261	53,821,667	RGD:1600115	InterPro
G	Afg3l2	AFG3 ATPase family member 3-like 2 (S. cerevisiae)		IEA	18	63,930,652	63,976,211	RGD:1600115	InterPro
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		ISO	6	137,640,482	137,657,552	RGD:1624291	RGD
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		IEA	6	137,640,482	137,657,552	RGD:1600115	ENSEMBL
G	Ambp	alpha-1-microglobulin/bikunin precursor		IDA	5	80,119,742	80,129,962	RGD:6904220	RGD
G	Atg7	autophagy related 7		ISO	4	150,814,706	150,992,704	RGD:1624291	RGD
G	Atg7	autophagy related 7		IEA	4	150,814,706	150,992,704	RGD:1600115	ENSEMBL
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		IEA	10	15,409,373	15,462,726	RGD:1600115	ENSEMBL
G	Btrc	beta-transducin repeat containing E3 ubiquitin protein ligase		ISO	1	250,528,730	250,693,952	RGD:1624291	RGD
G	Ctrb1	chymotrypsinogen B1		IDA	19	41,611,382	41,616,058	RGD:2303362	RGD
G	Cul2	cullin 2		ISO	17	62,701,289	62,741,344	RGD:1624291	RGD
G	Fbxo17	F-box protein 17		IEA	1	83,828,307	83,843,719	RGD:1600115	InterPro
G	Fbxo44	F-box protein 44		IEA	5	165,230,006	165,238,525	RGD:1600115	InterPro
G	Lnpep	leucyl/cystinyl aminopeptidase		ISO	1	56,063,361	56,151,257	RGD:1624291	RGD
G	LOC683077	similar to praja1, RING-H2 motif containing		IEA				RGD:1600115	ENSEMBL
G	Lonp2	lon peptidase 2, peroxisomal		IEA	19	21,785,263	21,838,495	RGD:1600115	InterPro
G	Lrsam1	leucine rich repeat and sterile alpha motif containing 1		ISO	3	11,911,191	11,951,806	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Nccrp1	non-specific cytotoxic cell receptor protein 1 homolog (zebrafish)		IEA	1	83,654,277	83,657,968	RGD:1600115	InterPro
G	Psmc1	proteasome (prosome, macropain) 26S subunit, ATPase, 1		IEA	6	124,380,976	124,393,338	RGD:1600115	InterPro
G	Psmc2	proteasome (prosome, macropain) 26S subunit, ATPase 2		IEA	4	8,704,100	8,718,351	RGD:1600115	InterPro
G	Psmc3	proteasome (prosome, macropain) 26S subunit, ATPase 3		IEA	3	75,413,567	75,418,948	RGD:1600115	InterPro
G	Psmc4	proteasome (prosome, macropain) 26S subunit, ATPase, 4		IEA	1	83,151,149	83,159,464	RGD:1600115	InterPro
G	Psmc6	proteasome (prosome, macropain) 26S subunit, ATPase, 6		IEA	15	21,217,367	21,239,320	RGD:1600115	InterPro
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Siah1a	seven in absentia 1A		ISO	19	21,717,141	21,740,751	RGD:1624291	RGD
G	Slc15a3	solute carrier family 15, member 3		NAS	1	213,341,322	213,356,103	RGD:633591	RGD
G	Traf2	Tnf receptor-associated factor 2		ISO	3	3,692,740	3,717,332	RGD:1624291	RGD
G	Traf2	Tnf receptor-associated factor 2		IEA	3	3,692,740	3,717,332	RGD:1600115	ENSEMBL
G	Trim24	tripartite motif-containing 24		ISO	4	65,490,076	65,543,305	RGD:1624291	RGD
G	Trim24	tripartite motif-containing 24		ISO	4	65,490,076	65,543,305	RGD:1624291	RGD
G	Ubr2	ubiquitin protein ligase E3 component n-recognin 2		IEA	9	9,165,363	9,247,261	RGD:1600115	InterPro
G	Uchl3	ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)		ISO	15	85,628,490	85,670,420	RGD:1624291	RGD
G	Uchl3	ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase)		ISO	15	85,628,490	85,670,420	RGD:1624291	RGD
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		ISO	4	149,529,396	149,536,289	RGD:1624291	RGD
G	Yme1l1	YME1-like 1 (S. cerevisiae)		IEA	17	96,758,634	96,796,686	RGD:1600115	InterPro
protein depalmitoylation
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Lypla1	lysophospholipase I		ISO	5	14,882,196	14,911,284	RGD:1624291	RGD
G	Lyplal1	lysophospholipase-like 1		ISO	13	102,143,174	102,171,752	RGD:1624291	RGD
G	Ppt1	palmitoyl-protein thioesterase 1		ISO	5	142,153,498	142,173,401	RGD:1624291	RGD
G	Ppt1	palmitoyl-protein thioesterase 1		ISO	5	142,153,498	142,173,401	RGD:1624291	RGD
G	Ppt1	palmitoyl-protein thioesterase 1		ISO	5	142,153,498	142,173,401	RGD:1624291	RGD
G	Ppt1	palmitoyl-protein thioesterase 1		ISO	5	142,153,498	142,173,401	RGD:1624291	RGD
G	Ppt1	palmitoyl-protein thioesterase 1		ISS	5	142,153,498	142,173,401		UniProtKB
G	Ppt1	palmitoyl-protein thioesterase 1		ISS	5	142,153,498	142,173,401	RGD:1600115	UniProtKB
putrescine biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Odc1	ornithine decarboxylase 1		IDA	6	41,309,211	41,315,796	RGD:1578320	RGD
G	Odc1	ornithine decarboxylase 1		IDA	6	41,309,211	41,315,796	RGD:7242912	RGD
G	Paox	polyamine oxidase (exo-N4-amino)		IEA	1	199,909,816	199,934,938	RGD:1600115	ENSEMBL
G	Paox	polyamine oxidase (exo-N4-amino)		ISO	1	199,909,816	199,934,938	RGD:1624291	RGD
putrescine biosynthetic process from arginine
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Agmat	agmatine ureohydrolase (agmatinase)		IEA	5	160,646,314	160,660,437	RGD:1600115	UniPathway
putrescine biosynthetic process from ornithine
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Odc1	ornithine decarboxylase 1		IEA	6	41,309,211	41,315,796	RGD:1600115	UniPathway
putrescine catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Paox	polyamine oxidase (exo-N4-amino)		IEA	1	199,909,816	199,934,938	RGD:1600115	ENSEMBL
G	Paox	polyamine oxidase (exo-N4-amino)		ISO	1	199,909,816	199,934,938	RGD:1624291	RGD
regulation of glycogen biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		ISO	6	137,640,482	137,657,552	RGD:1624291	RGD
G	Inpp5k	inositol polyphosphate-5-phosphatase K		ISO	10	62,953,425	62,971,016	RGD:1624291	RGD
G	Mtor	mechanistic target of rapamycin (serine/threonine kinase)		IDA	5	165,531,402	165,640,899	RGD:1625611	RGD
G	Mtor	mechanistic target of rapamycin (serine/threonine kinase)		IMP	5	165,531,402	165,640,899	RGD:1625611	RGD
G	Ppp1ca	protein phosphatase 1, catalytic subunit, alpha isozyme		IDA	1	206,774,719	206,778,336	RGD:2304267	RGD
G	Ppp1cb	protein phosphatase 1, catalytic subunit, beta isozyme		IDA	6	24,067,544	24,099,280	RGD:2304267	RGD
G	Ppp1r3b	protein phosphatase 1, regulatory subunit 3B		IDA	16	60,552,431	60,564,789	RGD:2304267	RGD
G	Ppp1r3b	protein phosphatase 1, regulatory subunit 3B		IDA	16	60,552,431	60,564,789	RGD:2306167	RGD
G	Ppp1r3c	protein phosphatase 1, regulatory subunit 3C		IDA	1	240,991,884	240,996,887	RGD:2306167	RGD
G	Ppp1r3d	protein phosphatase 1, regulatory subunit 3D		IDA	3	167,505,678	167,508,749	RGD:2306167	RGD
G	Ppp1r3e	protein phosphatase 1, regulatory subunit 3E		IDA	15	32,974,172	32,975,332	RGD:2306166	RGD
regulation of glycogen catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ppp1ca	protein phosphatase 1, catalytic subunit, alpha isozyme		IDA	1	206,774,719	206,778,336	RGD:2304267	RGD
G	Ppp1cb	protein phosphatase 1, catalytic subunit, beta isozyme		IDA	6	24,067,544	24,099,280	RGD:2304267	RGD
G	Ppp1r3b	protein phosphatase 1, regulatory subunit 3B		IDA	16	60,552,431	60,564,789	RGD:2304267	RGD
G	Ppp1r3b	protein phosphatase 1, regulatory subunit 3B		IDA	16	60,552,431	60,564,789	RGD:2306167	RGD
G	Ppp1r3c	protein phosphatase 1, regulatory subunit 3C		IDA	1	240,991,884	240,996,887	RGD:2306167	RGD
G	Ppp1r3d	protein phosphatase 1, regulatory subunit 3D		IDA	3	167,505,678	167,508,749	RGD:2306167	RGD
G	Ppp1r3e	protein phosphatase 1, regulatory subunit 3E		IDA	15	32,974,172	32,975,332	RGD:2306166	RGD
regulation of low-density lipoprotein particle receptor catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Mylip	myosin regulatory light chain interacting protein		IEA	17	25,308,147	25,329,887	RGD:1600115	ENSEMBL
G	Pcsk9	proprotein convertase subtilisin/kexin type 9		ISO	5	127,501,476	127,524,289	RGD:1624291	RGD
G	Pcsk9	proprotein convertase subtilisin/kexin type 9		ISO	5	127,501,476	127,524,289	RGD:1624291	RGD
G	Pcsk9	proprotein convertase subtilisin/kexin type 9		IEA	5	127,501,476	127,524,289	RGD:1600115	ENSEMBL
regulation of proteasomal protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Btrc	beta-transducin repeat containing E3 ubiquitin protein ligase		ISO	1	250,528,730	250,693,952	RGD:1624291	RGD
G	Btrc	beta-transducin repeat containing E3 ubiquitin protein ligase		IEA	1	250,528,730	250,693,952	RGD:1600115	ENSEMBL
G	Dlgap1	discs, large (Drosophila) homolog-associated protein 1		IMP	9	109,455,911	110,018,738		BHF-UCL
G	Dyx1c1	dyslexia susceptibility 1 candidate 1		ISO	8	77,702,354	77,715,547	RGD:1624291	RGD
G	Dyx1c1	dyslexia susceptibility 1 candidate 1		ISS	8	77,702,354	77,715,547	RGD:1600115	UniProtKB
G	Gpx1	glutathione peroxidase 1		ISO				RGD:1624291	RGD
G	Gpx1	glutathione peroxidase 1		IEA				RGD:1600115	ENSEMBL
G	Prkaca	protein kinase, cAMP-dependent, catalytic, alpha		ISO	19	25,840,795	25,864,786	RGD:1624291	RGD
G	Prkaca	protein kinase, cAMP-dependent, catalytic, alpha		IEA	19	25,840,795	25,864,786	RGD:1600115	ENSEMBL
G	Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14		ISO	3	43,660,136	43,699,412	RGD:1624291	RGD
G	Psmd14	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14		IEA	3	43,660,136	43,699,412	RGD:1600115	ENSEMBL
G	Psme3	proteasome (prosome, macropain) activator subunit 3		ISO	10	90,343,493	90,351,335	RGD:1624291	RGD
G	Rhbdf1	rhomboid 5 homolog 1 (Drosophila)		ISO	10	15,653,948	15,666,851	RGD:1624291	RGD
G	Rhbdf1	rhomboid 5 homolog 1 (Drosophila)		ISS	10	15,653,948	15,666,851	RGD:1600115	UniProtKB
G	Uchl5	ubiquitin carboxyl-terminal hydrolase L5		ISO	13	57,605,912	57,643,050	RGD:1624291	RGD
G	Uchl5	ubiquitin carboxyl-terminal hydrolase L5		IEA	13	57,605,912	57,643,050	RGD:1600115	ENSEMBL
G	Usp14	ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)		ISO	18	1,292,799	1,330,478	RGD:1624291	RGD
G	Usp14	ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase)		IEA	18	1,292,799	1,330,478	RGD:1600115	ENSEMBL
regulation of proteasomal ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Commd1	copper metabolism (Murr1) domain containing 1		IEA	14	103,571,472	103,667,692	RGD:1600115	ENSEMBL
G	Commd1	copper metabolism (Murr1) domain containing 1		ISO	14	103,571,472	103,667,692	RGD:1624291	RGD
G	Glmn	glomulin, FKBP associated protein		IEA	14	2,744,359	2,789,190	RGD:1600115	ENSEMBL
G	Glmn	glomulin, FKBP associated protein		ISO	14	2,744,359	2,789,190	RGD:1624291	RGD
G	Rad23a	RAD23 homolog A (S. cerevisiae)		ISO	19	24,971,070	24,976,901	RGD:1624291	RGD
G	Rad23a	RAD23 homolog A (S. cerevisiae)		IEA	19	24,971,070	24,976,901	RGD:1600115	ENSEMBL
G	Rad23b	RAD23 homolog B (S. cerevisiae)		ISO	5	73,256,542	73,294,296	RGD:1624291	RGD
G	Rad23b	RAD23 homolog B (S. cerevisiae)		IEA	5	73,256,542	73,294,296	RGD:1600115	ENSEMBL
G	Ube2k	ubiquitin-conjugating enzyme E2K		ISO	14	45,349,287	45,411,823	RGD:1624291	RGD
G	Ube2k	ubiquitin-conjugating enzyme E2K		ISO	14	45,349,287	45,411,823	RGD:1624291	RGD
G	Ubqln4	ubiquilin 4		IEA	2	180,669,525	180,684,724	RGD:1600115	ENSEMBL
G	Ubqln4	ubiquilin 4		ISO	2	180,669,525	180,684,724	RGD:1624291	RGD
G	Wnt10b	wingless-type MMTV integration site family, member 10B		ISO	7	137,541,197	137,547,000	RGD:1624291	RGD
regulation of protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		ISO	1	171,062,181	171,162,426	RGD:1624291	RGD
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		IEA	1	171,062,181	171,162,426	RGD:1600115	ENSEMBL
G	Cast	calpastatin		TAS	2	1,495,048	1,608,477	RGD:1298731	RGD
G	Cdc42	cell division cycle 42 (GTP binding protein)		ISO	5	156,106,123	156,143,040	RGD:1624291	RGD
G	Cdc42	cell division cycle 42 (GTP binding protein)		IEA	5	156,106,123	156,143,040	RGD:1600115	ENSEMBL
G	Chek2	checkpoint kinase 2		ISO	12	45,933,900	45,965,427	RGD:1624291	RGD
G	Chek2	checkpoint kinase 2		IEA	12	45,933,900	45,965,427	RGD:1600115	ENSEMBL
G	Faf1	Fas (TNFRSF6) associated factor 1		IEA	5	131,027,463	131,394,549	RGD:1600115	ENSEMBL
G	Faf1	Fas (TNFRSF6) associated factor 1		ISO	5	131,027,463	131,394,549	RGD:1624291	RGD
G	Faf1	Fas (TNFRSF6) associated factor 1		ISS	5	131,027,463	131,394,549	RGD:1600115	UniProtKB
G	Furin	furin (paired basic amino acid cleaving enzyme)		ISO	1	136,209,969	136,222,057	RGD:1624291	RGD
G	LOC100363283	UBX domain protein 2A		IEA	6	28,187,320	28,213,193	RGD:1600115	ENSEMBL
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Ppp2ca	protein phosphatase 2, catalytic subunit, alpha isozyme		IMP	10	37,621,256	37,641,008		MGI
G	Psmd1	proteasome (prosome, macropain) 26S subunit, non-ATPase, 1		IEA	9	84,807,822	84,882,942	RGD:1600115	InterPro
G	Psmd2	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2		IEA	11	82,478,177	82,488,804	RGD:1600115	InterPro
G	Psmd3	proteasome (prosome, macropain) 26S subunit, non-ATPase, 3		IEA	10	87,456,442	87,468,383	RGD:1600115	InterPro
G	Serpinb1a	serine (or cysteine) proteinase inhibitor, clade B, member 1a		ISO	17	37,950,875	37,959,284	RGD:1624291	RGD
G	Serpinb1a	serine (or cysteine) proteinase inhibitor, clade B, member 1a		IEA	17	37,950,875	37,959,284	RGD:1600115	ENSEMBL
G	Serpinb1b	serine (or cysteine) peptidase inhibitor, clade B, member 1b		ISO	17	37,679,496	37,686,875	RGD:1624291	RGD
G	Ubxn2a	UBX domain protein 2A		IEA	6	29,554,836	29,558,146	RGD:1600115	ENSEMBL
G	Xpo1	exportin 1, CRM1 homolog (yeast)		ISO	14	103,943,249	103,978,717	RGD:1624291	RGD
G	Xpo1	exportin 1, CRM1 homolog (yeast)		IEA	14	103,943,249	103,978,717	RGD:1600115	ENSEMBL
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ccnf	cyclin F		ISO	10	13,474,659	13,500,979	RGD:1624291	RGD
G	Ccnf	cyclin F		ISS	10	13,474,659	13,500,979	RGD:1600115	UniProtKB
G	Cul1	cullin 1		ISO	4	75,636,914	75,705,724	RGD:1624291	RGD
G	Cul1	cullin 1		IEA	4	75,636,914	75,705,724	RGD:1600115	ENSEMBL
G	Cul1	cullin 1		ISO	4	75,636,914	75,705,724	RGD:1624291	RGD
G	Fbxl15	F-box and leucine-rich repeat protein 15		ISS	1	251,544,341	251,546,582	RGD:1600115	UniProtKB
G	Fbxl15	F-box and leucine-rich repeat protein 15		ISO	1	251,544,341	251,546,582	RGD:1624291	RGD
G	Fbxl3	F-box and leucine-rich repeat protein 3		IEA	15	87,093,141	87,113,003	RGD:1600115	ENSEMBL
G	Fbxl3	F-box and leucine-rich repeat protein 3		ISO	15	87,093,141	87,113,003	RGD:1624291	RGD
G	Fbxl5	F-box and leucine-rich repeat protein 5		IEA	14	72,471,063	72,510,384	RGD:1600115	ENSEMBL
G	Fbxl5	F-box and leucine-rich repeat protein 5		ISO	14	72,471,063	72,510,384	RGD:1624291	RGD
G	Fbxl5	F-box and leucine-rich repeat protein 5		ISO	14	72,471,063	72,510,384	RGD:1624291	RGD
G	Fbxl5	F-box and leucine-rich repeat protein 5		ISO	14	72,471,063	72,510,384	RGD:1624291	RGD
G	Fbxl7	F-box and leucine-rich repeat protein 7		ISO	2	78,232,361	78,610,165	RGD:1624291	RGD
G	Fbxl7	F-box and leucine-rich repeat protein 7		IEA	2	78,232,361	78,610,165	RGD:1600115	ENSEMBL
G	Fbxo2	F-box protein 2		ISO	5	165,239,080	165,244,509	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		IEA	5	165,239,080	165,244,509	RGD:1600115	ENSEMBL
G	Fbxo31	F-box protein 31		ISS	19	51,836,918	51,837,223	RGD:1600115	UniProtKB
G	Fbxo31	F-box protein 31		ISO	19	51,836,918	51,837,223	RGD:1624291	RGD
G	Fbxo31	F-box protein 31		IEA	19	51,836,918	51,837,223	RGD:1600115	InterPro
G	Fbxo4	F-box protein 4		ISO	2	53,871,746	53,884,722	RGD:1624291	RGD
G	Fbxo6	F-box protein 6		ISO	5	165,223,009	165,226,420	RGD:1624291	RGD
G	Fbxo6	F-box protein 6		ISO	5	165,223,009	165,226,420	RGD:1624291	RGD
G	Fbxo6	F-box protein 6		ISS	5	165,223,009	165,226,420	RGD:1600115	UniProtKB
G	Fbxo9	f-box protein 9		ISO	8	83,056,071	83,081,992	RGD:1624291	RGD
G	Fbxo9	f-box protein 9		ISS	8	83,056,071	83,081,992	RGD:1600115	UniProtKB
G	Fbxw11	F-box and WD repeat domain containing 11		ISO	10	17,502,480	17,600,199	RGD:1624291	RGD
G	Fbxw11	F-box and WD repeat domain containing 11		IEA	10	17,502,480	17,600,199	RGD:1600115	ENSEMBL
G	Fbxw11	F-box and WD repeat domain containing 11		IEA	10	17,502,480	17,600,199	RGD:1600115	ENSEMBL
G	Fbxw11	F-box and WD repeat domain containing 11		ISO	10	17,502,480	17,600,199	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		ISO	3	3,673,918	3,677,876	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		ISS	3	3,673,918	3,677,876	RGD:1600115	UniProtKB
G	Fbxw7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase		ISO	2	176,675,226	176,750,737	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Skp1	S-phase kinase-associated protein 1		ISO	10	37,665,417	37,680,338	RGD:1624291	RGD
G	Skp1	S-phase kinase-associated protein 1		ISO	10	37,665,417	37,680,338	RGD:1624291	RGD
G	Skp1	S-phase kinase-associated protein 1		ISO	10	37,665,417	37,680,338	RGD:1624291	RGD
G	Skp1	S-phase kinase-associated protein 1		ISS	10	37,665,417	37,680,338	RGD:1600115	UniProtKB
spermidine biosynthetic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Agmat	agmatine ureohydrolase (agmatinase)		IEA	5	160,646,314	160,660,437	RGD:1600115	UniProtKB
G	Amd1	adenosylmethionine decarboxylase 1		IDA	20	44,452,475	44,468,111	RGD:1578320	RGD
G	Amd1	adenosylmethionine decarboxylase 1		ISO