histone deacetylase binding - Ontology Report

Help | FTP Download | Citing RGD | Contact Us

Keyword

ONTOLOGY REPORT - ANNOTATIONS

Term:	histone deacetylase binding	go back to main search page
Accession:	GO:0042826	browse the term
Definition:	Interacting selectively and non-covalently with the enzyme histone deacetylase.

Rat
Mouse
Human
All
show annotations for term's descendants
Sort by:

histone deacetylase binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ankra2	ankyrin repeat, family A (RFXANK-like), 2		ISO	2	28,853,907	28,864,539	RGD:1624291	RGD
G	Ankrd1	ankyrin repeat domain 1		ISO	1	240,316,123	240,324,804	RGD:1624291	RGD
G	Ankrd1	ankyrin repeat domain 1		IEA	1	240,316,123	240,324,804	RGD:1600115	ENSEMBL
G	Bcor	BCL6 co-repressor		IEA	X	22,699,778	22,820,234	RGD:1600115	ENSEMBL
G	Bcor	BCL6 co-repressor		ISO	X	22,699,778	22,820,234	RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Camta2	calmodulin binding transcription activator 2		ISO	10	57,549,855	57,567,958	RGD:1624291	RGD
G	Cbx5	chromobox homolog 5		ISO	7	142,107,922	142,125,543	RGD:1624291	RGD
G	Cbx5	chromobox homolog 5		IEA	7	142,107,922	142,125,543	RGD:1600115	ENSEMBL
G	Dnmt1	DNA (cytosine-5-)-methyltransferase 1		IPI	8	19,926,995	19,973,256	RGD:1359078	RGD
G	Foxp3	forkhead box P3		IBA	X	26,950,006	26,965,329	RGD:1600115	RefGenome
G	Foxp3	forkhead box P3		ISO	X	26,950,006	26,965,329	RGD:1624291	RGD
G	Gli3	GLI family zinc finger 3		ISO	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3		ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gmnn	geminin		ISO	17	47,372,316	47,380,559	RGD:1624291	RGD
G	Gmnn	geminin		IEA	17	47,372,316	47,380,559	RGD:1600115	ENSEMBL
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac10	histone deacetylase 10		ISO	7	127,423,736	127,428,838	RGD:1624291	RGD
G	Hdac10	histone deacetylase 10		IEA	7	127,423,736	127,428,838	RGD:1600115	ENSEMBL
G	Hdac3	histone deacetylase 3		ISO	18	30,857,209	30,875,986	RGD:1624291	RGD
G	Hdac3	histone deacetylase 3		ISO	18	30,857,209	30,875,986	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		IEA	9	91,147,435	91,389,810	RGD:1600115	ENSEMBL
G	Hdac6	histone deacetylase 6		ISO	X	26,585,852	26,606,999	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		IEA	6	53,066,308	53,114,402	RGD:1600115	ENSEMBL
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hes1	hairy and enhancer of split 1 (Drosophila)		ISO	11	72,603,482	72,605,673	RGD:1624291	RGD
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		IEA	1	27,505,117	27,515,204	RGD:1600115	ENSEMBL
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		ISO	1	27,505,117	27,515,204	RGD:1624291	RGD
G	Hic1	hypermethylated in cancer 1		ISO	10	62,470,736	62,476,506	RGD:1624291	RGD
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)		ISO	6	96,419,024	96,463,891	RGD:1624291	RGD
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)		IEA	6	96,419,024	96,463,891	RGD:1600115	ENSEMBL
G	Hr	hair growth associated		IDA	15	50,957,053	50,972,842	RGD:1599577	RGD
G	Kat2a	K(lysine) acetyltransferase 2A		IEA	10	89,642,002	89,649,953	RGD:1600115	ENSEMBL
G	Kat2a	K(lysine) acetyltransferase 2A		ISO	10	89,642,002	89,649,953	RGD:1624291	RGD
G	Kpna2	karyopherin alpha 2		ISO	10	96,342,214	96,352,613	RGD:1624291	RGD
G	Lpin1	lipin 1		ISO	6	40,253,664	40,297,195	RGD:1624291	RGD
G	Lpin1	lipin 1		IEA	6	40,253,664	40,297,195	RGD:1600115	ENSEMBL
G	Mapk8	mitogen-activated protein kinase 8		ISO	16	8,925,133	9,004,897	RGD:1624291	RGD
G	Mef2a	myocyte enhancer factor 2a		ISO				RGD:1624291	RGD
G	Mef2a	myocyte enhancer factor 2a		ISS				RGD:1600115	UniProtKB
G	Mef2a	myocyte enhancer factor 2a		ISO				RGD:1624291	RGD
G	Mef2c	myocyte enhancer factor 2C		ISO	2	12,331,078	12,346,520	RGD:1624291	RGD
G	Mef2c	myocyte enhancer factor 2C		IEA	2	12,331,078	12,346,520	RGD:1600115	ENSEMBL
G	Mef2d	myocyte enhancer factor 2D		ISO	2	180,221,078	180,246,917	RGD:1624291	RGD
G	Mef2d	myocyte enhancer factor 2D		IEA	2	180,221,078	180,246,917	RGD:1600115	ENSEMBL
G	Myocd	myocardin		ISO	10	51,496,223	51,588,226	RGD:1624291	RGD
G	Myocd	myocardin		IEA	10	51,496,223	51,588,226	RGD:1600115	ENSEMBL
G	Nacc2	NACC family member 2, BEN and BTB (POZ) domain containing		IEA	3	4,237,814	4,301,608	RGD:1600115	ENSEMBL
G	Nacc2	NACC family member 2, BEN and BTB (POZ) domain containing		ISO	3	4,237,814	4,301,608	RGD:1624291	RGD
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Ncor2	nuclear receptor co-repressor 2		ISO	12	32,617,643	32,725,753	RGD:1624291	RGD
G	Ncor2	nuclear receptor co-repressor 2		ISO	12	32,617,643	32,725,753	RGD:1624291	RGD
G	Nipbl	Nipped-B homolog (Drosophila)		ISO	2	57,908,828	58,099,422	RGD:1624291	RGD
G	Nkx3-1	NK3 homeobox 1		ISO	15	49,743,313	49,745,905	RGD:1624291	RGD
G	Nkx3-1	NK3 homeobox 1		IEA	15	49,743,313	49,745,905	RGD:1600115	ENSEMBL
G	Nr2c1	nuclear receptor subfamily 2, group C, member 1		IEA	7	31,293,180	31,345,189	RGD:1600115	ENSEMBL
G	Nrip1	nuclear receptor interacting protein 1		ISO	11	15,066,443	15,150,137	RGD:1624291	RGD
G	Nrip1	nuclear receptor interacting protein 1		IEA	11	15,066,443	15,150,137	RGD:1600115	ENSEMBL
G	Nudt21	nudix (nucleoside diphosphate linked moiety X)-type motif 21		ISO	19	11,412,732	11,428,838	RGD:1624291	RGD
G	Nudt21	nudix (nucleoside diphosphate linked moiety X)-type motif 21		IEA	19	11,412,732	11,428,838	RGD:1600115	ENSEMBL
G	Phb	prohibitin		ISO				RGD:1624291	RGD
G	Pkn1	protein kinase N1		ISO	19	26,132,497	26,160,471	RGD:1624291	RGD
G	Pkn1	protein kinase N1		ISS	19	26,132,497	26,160,471	RGD:1600115	UniProtKB
G	Pkn2	protein kinase N2		IEA	2	240,903,608	241,009,063	RGD:1600115	ENSEMBL
G	Pkn2	protein kinase N2		ISO	2	240,903,608	241,009,063	RGD:1624291	RGD
G	Pkn2	protein kinase N2		ISS	2	240,903,608	241,009,063	RGD:1600115	UniProtKB
G	Prdm1	PR domain containing 1, with ZNF domain		ISO	20	48,438,224	48,459,848	RGD:1624291	RGD
G	Prdm1	PR domain containing 1, with ZNF domain		IEA	20	48,438,224	48,459,848	RGD:1600115	ENSEMBL
G	Rad9a	RAD9 homolog A (S. pombe)		IEA	1	206,778,534	206,785,230	RGD:1600115	ENSEMBL
G	Rad9a	RAD9 homolog A (S. pombe)		ISO	1	206,778,534	206,785,230	RGD:1624291	RGD
G	Rbbp4	retinoblastoma binding protein 4		ISO	5	148,472,397	148,492,172	RGD:1624291	RGD
G	Rfxank	regulatory factor X-associated ankyrin-containing protein		ISO	16	19,764,913	19,772,281	RGD:1624291	RGD
G	Rfxank	regulatory factor X-associated ankyrin-containing protein		IEA	16	19,764,913	19,772,281	RGD:1600115	ENSEMBL
G	RGD1563620	similar to retinoblastoma binding protein 4		IEA	2	159,790,945	159,792,747	RGD:1600115	ENSEMBL
G	Sik1	salt-inducible kinase 1		ISO	20	10,282,203	10,291,735	RGD:1624291	RGD
G	Sik1	salt-inducible kinase 1		IEA	20	10,282,203	10,291,735	RGD:1600115	ENSEMBL
G	Sirt2	sirtuin 2		ISO	1	83,873,578	83,896,121	RGD:1624291	RGD
G	Sirt2	sirtuin 2		IEA	1	83,873,578	83,896,121	RGD:1600115	ENSEMBL
G	Skor2	SKI family transcriptional corepressor 2		ISO	18	73,821,250	73,864,209	RGD:1624291	RGD
G	Sp1	Sp1 transcription factor		ISO	7	141,164,180	141,194,509	RGD:1624291	RGD
G	Sp1	Sp1 transcription factor		ISO	7	141,164,180	141,194,509	RGD:1624291	RGD
G	Sp1	Sp1 transcription factor		IEA	7	141,164,180	141,194,509	RGD:1600115	ENSEMBL
G	Sp2	Sp2 transcription factor		IEA	10	85,676,978	85,706,042	RGD:1600115	ENSEMBL
G	Suds3	suppressor of defective silencing 3 homolog (S. cerevisiae)		ISO	12	40,668,710	40,690,008	RGD:1624291	RGD
G	Tal1	T-cell acute lymphocytic leukemia 1		IEA	5	135,430,985	135,444,692	RGD:1600115	ENSEMBL
G	Tcf21	transcription factor 21		ISO	1	23,211,054	23,213,913	RGD:1624291	RGD
G	Tcf21	transcription factor 21		IEA	1	23,211,054	23,213,913	RGD:1600115	ENSEMBL
G	Tfap4	transcription factor AP-4		ISO	10	11,144,057	11,159,763	RGD:1624291	RGD
G	Tfap4	transcription factor AP-4		ISO	10	11,144,057	11,159,763	RGD:1624291	RGD
G	Tfap4	transcription factor AP-4		ISO	10	11,144,057	11,159,763	RGD:1624291	RGD
G	Tfap4	transcription factor AP-4		IEA	10	11,144,057	11,159,763	RGD:1600115	ENSEMBL
G	Top2a	topoisomerase (DNA) II alpha		ISO	10	87,771,337	87,800,960	RGD:1624291	RGD
G	Top2a	topoisomerase (DNA) II alpha		ISO	10	87,771,337	87,800,960	RGD:1624291	RGD
G	Top2b	topoisomerase (DNA) II beta		ISO				RGD:1624291	RGD
G	Top2b	topoisomerase (DNA) II beta		ISO				RGD:1624291	RGD
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		IEA	3	86,827,582	86,847,408	RGD:1600115	ENSEMBL
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Uhrf1bp1	UHRF1 binding protein 1		ISO	20	6,067,567	6,108,468	RGD:1624291	RGD
G	Usf1	upstream transcription factor 1		ISO	13	87,336,705	87,344,466	RGD:1624291	RGD
G	Usf1	upstream transcription factor 1		IEA	13	87,336,705	87,344,466	RGD:1600115	ENSEMBL
G	Wdtc1	WD and tetratricopeptide repeats 1		ISO	5	151,784,746	151,834,368	RGD:1624291	RGD
G	Wdtc1	WD and tetratricopeptide repeats 1		IEA	5	151,784,746	151,834,368	RGD:1600115	ENSEMBL
G	Ywhab	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide		ISO	3	154,926,025	154,948,297	RGD:1624291	RGD
G	Ywhab	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide		IEA	3	154,926,025	154,948,297	RGD:1600115	ENSEMBL
G	Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide		ISO	10	63,072,128	63,109,833	RGD:1624291	RGD
G	Ywhae	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide		IEA	10	63,072,128	63,109,833	RGD:1600115	ENSEMBL
G	Zmynd15	zinc finger, MYND-type containing 15		ISO	10	57,300,603	57,307,217	RGD:1624291	RGD
G	Zmynd15	zinc finger, MYND-type containing 15		IEA	10	57,300,603	57,307,217	RGD:1600115	ENSEMBL
G	Znhit1	zinc finger, HIT-type containing 1		ISO	12	20,850,592	20,856,635	RGD:1624291	RGD

Term paths to the root

Path 1
Term	Annotations
molecular_function	87674
binding	56387
protein binding	38759
enzyme binding	2476
histone deacetylase binding	112