ONTOLOGY REPORT - ANNOTATIONS


Term:melanosome
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Accession:GO:0042470 term browser browse the term
Definition:A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
Synonyms:xref_analog: Wikipedia:Melanosome


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melanosome term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Ahcy adenosylhomocysteinase JBrowse link 3 150,587,833 150,603,057 RGD:1600115
G Ankrd27 ankyrin repeat domain 27 JBrowse link 1 91,857,037 91,958,763 RGD:1600115
RGD:1624291
G Anxa2 annexin A2 JBrowse link 8 75,687,134 75,723,589 RGD:1600115
G Anxa6 annexin A6 JBrowse link 10 40,320,581 40,375,605 RGD:1600115
G Atp1b3 ATPase Na+/K+ transporting subunit beta 3 JBrowse link 8 104,190,032 104,221,342 RGD:1600115
G Atp6v0a1 ATPase H+ transporting V0 subunit a1 JBrowse link 10 88,914,275 88,967,736 RGD:1600115
G Atp6v1b2 ATPase H+ transporting V1 subunit B2 JBrowse link 16 22,326,537 22,350,143 RGD:1600115
G Bsg basigin JBrowse link 7 12,875,536 12,882,753 RGD:1600115
G Calu calumenin JBrowse link 4 56,625,611 56,653,112 RGD:1600115
G Canx calnexin JBrowse link 10 35,800,942 35,833,937 RGD:1600115
G Capg capping actin protein, gelsolin like JBrowse link 4 100,402,301 100,419,447 RGD:1600115
G Cct4 chaperonin containing TCP1 subunit 4 JBrowse link 14 107,767,392 107,780,270 RGD:1600115
G Cd63 Cd63 molecule JBrowse link 7 3,320,250 3,335,581 RGD:1600115
G Cltc clathrin heavy chain JBrowse link 10 74,014,560 74,070,575 RGD:1600115
G Cnp 2',3'-cyclic nucleotide 3' phosphodiesterase JBrowse link 10 88,489,993 88,497,357 RGD:1600115
G Ctsb cathepsin B JBrowse link 15 46,316,741 46,337,613 RGD:1600115
G Ctsd cathepsin D JBrowse link 1 215,541,570 215,553,446 RGD:1600115
G Dct dopachrome tautomerase JBrowse link 15 103,208,041 103,245,033 RGD:1624291
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 JBrowse link 3 177,013,190 177,047,159 RGD:1600115
G Erp29 endoplasmic reticulum protein 29 JBrowse link 12 40,619,377 40,625,884 RGD:1600115
G Fasn fatty acid synthase JBrowse link 10 109,987,735 110,005,901 RGD:1600115
G Flot1 flotillin 1 JBrowse link 20 3,427,890 3,438,409 RGD:1600115
G Gchfr GTP cyclohydrolase I feedback regulator JBrowse link 3 110,975,923 110,979,957 RGD:1600115
RGD:1624291
G Ggh gamma-glutamyl hydrolase JBrowse link 5 34,040,258 34,063,369 RGD:1600115
G Gna13 G protein subunit alpha 13 JBrowse link 10 97,647,196 97,680,030 RGD:1600115
G Gpnmb glycoprotein nmb JBrowse link 4 78,694,447 78,715,685 RGD:1600115
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1624291
G Hps4 Hermansky-Pudlak syndrome 4 JBrowse link 12 50,285,293 50,315,844 RGD:1600115
RGD:1624291
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 JBrowse link 6 135,107,262 135,112,793 RGD:1600115
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 JBrowse link 9 17,817,791 17,823,163 RGD:1600115
G Hsp90b1 heat shock protein 90 beta family member 1 JBrowse link 7 27,226,570 27,240,533 RGD:1600115
G Hspa5 heat shock protein family A member 5 JBrowse link 3 13,838,304 13,842,763 RGD:1600115
G Hspa8 heat shock protein family A (Hsp70) member 8 JBrowse link 8 44,989,401 44,993,261 RGD:1600115
G Itgb1 integrin subunit beta 1 JBrowse link 19 61,677,512 61,725,537 RGD:1600115
G Itgb3 integrin subunit beta 3 JBrowse link 10 92,667,869 92,783,413 RGD:1624291
G Lamp1 lysosomal-associated membrane protein 1 JBrowse link 16 81,689,576 81,706,561 RGD:1600115
RGD:1624291
G LOC103692716 heat shock protein HSP 90-alpha JBrowse link 6 135,044,833 135,050,421 RGD:1600115
G Mlana melan-A JBrowse link 1 247,869,756 247,883,558 RGD:1600115
RGD:1624291
G Mlph melanophilin JBrowse link 9 98,072,838 98,108,429 RGD:1624291
G Mmp14 matrix metallopeptidase 14 JBrowse link 15 33,074,441 33,083,666 RGD:1600115
G Mreg melanoregulin JBrowse link 9 79,490,058 79,545,024 RGD:1600115
RGD:1624291
G Myh11 myosin heavy chain 11 JBrowse link 10 764,421 859,184 RGD:1600115
G Myo5a myosin VA JBrowse link 8 82,038,966 82,156,507 RGD:1600115
RGD:1624291
G Myo7a myosin VIIA JBrowse link 1 163,001,313 163,071,542 RGD:1600115
RGD:1624291
G Myrip myosin VIIA and Rab interacting protein JBrowse link 8 128,972,383 129,139,257 RGD:1600115
RGD:1624291
G Nap1l1 nucleosome assembly protein 1-like 1 JBrowse link 7 54,213,305 54,237,880 RGD:1600115
G Ncstn nicastrin JBrowse link 13 90,451,046 90,467,256 RGD:1600115
G P4hb prolyl 4-hydroxylase subunit beta JBrowse link 10 109,736,467 109,747,962 RGD:1600115
G Pdcd6ip programmed cell death 6 interacting protein JBrowse link 8 121,916,233 121,973,465 RGD:1600115
G Pdia3 protein disulfide isomerase family A, member 3 JBrowse link 3 113,376,983 113,400,707 RGD:1600115
G Pdia4 protein disulfide isomerase family A, member 4 JBrowse link 4 77,470,636 77,489,535 RGD:1600115
G Pdia6 protein disulfide isomerase family A, member 6 JBrowse link 6 42,568,269 42,585,654 RGD:1600115
G Pmel premelanosome protein JBrowse link 7 3,133,343 3,143,827 RGD:1600115
RGD:1624291
G Ppib peptidylprolyl isomerase B JBrowse link 8 71,719,681 71,725,538 RGD:1600115
G Prdx1 peroxiredoxin 1 JBrowse link 5 135,536,413 135,551,986 RGD:1600115
G Rab17 RAB17, member RAS oncogene family JBrowse link 9 98,118,907 98,131,883 RGD:1600115
RGD:1624291
G Rab1a RAB1A, member RAS oncogene family JBrowse link 14 104,475,082 104,500,176 RGD:1600115
RGD:1624291
G Rab27a RAB27A, member RAS oncogene family JBrowse link 8 79,722,334 79,776,222 RGD:1600115
RGD:1624291
G Rab27b RAB27B, member RAS oncogene family JBrowse link 18 68,484,927 68,644,585 RGD:1600115
RGD:1624291
G Rab29 RAB29, member RAS oncogene family JBrowse link 13 48,644,583 48,650,229 RGD:1600115
G Rab2a RAB2A, member RAS oncogene family JBrowse link 5 21,632,656 21,696,721 RGD:1600115
G Rab32 RAB32, member RAS oncogene family JBrowse link 1 4,638,663 4,653,220 RGD:1600115
RGD:1624291
G Rab35 RAB35, member RAS oncogene family JBrowse link 12 46,704,274 46,718,405 RGD:1600115
G Rab38 RAB38, member RAS oncogene family JBrowse link 1 152,072,716 152,153,449 RGD:1600115
RGD:1624291
G Rab5a RAB5A, member RAS oncogene family JBrowse link 9 5,910 6,065 RGD:1600115
G Rab5al1 Rab5a, member RAS oncogene family-like 1 JBrowse link 14 72,889,013 72,891,156 RGD:1600115
G Rac1 ras-related C3 botulinum toxin substrate 1 JBrowse link 12 13,090,338 13,111,835 RGD:1600115
G Ran RAN, member RAS oncogene family JBrowse link 12 31,319,556 31,323,758 RGD:1600115
G Rpn1 ribophorin I JBrowse link 4 119,997,268 120,018,679 RGD:1600115
G Sdcbp syndecan binding protein JBrowse link 5 19,471,664 19,498,499 RGD:1600115
G Sec22b SEC22 homolog B, vesicle trafficking protein JBrowse link 2 200,076,079 200,096,861 RGD:1600115
G Slc2a1 solute carrier family 2 member 1 JBrowse link 5 138,154,677 138,182,897 RGD:1600115
G Slc3a2 solute carrier family 3 member 2 JBrowse link 1 224,906,566 224,921,029 RGD:1600115
G Snd1 staphylococcal nuclease and tudor domain containing 1 JBrowse link 4 55,772,377 56,171,669 RGD:1600115
G Stx3 syntaxin 3 JBrowse link 1 228,137,230 228,194,989 RGD:1624291
G Syngr1 synaptogyrin 1 JBrowse link 7 121,311,010 121,334,437 RGD:1600115
G Sytl1 synaptotagmin-like 1 JBrowse link 5 151,448,639 151,459,875 RGD:1624291
G Sytl2 synaptotagmin-like 2 JBrowse link 1
1
154,536,592
156,334,298
154,599,515
156,440,332
RGD:1624291
G Tfrc transferrin receptor JBrowse link 11 71,397,423 71,419,263 RGD:1600115
G Tmed10 transmembrane p24 trafficking protein 10 JBrowse link 6 109,169,739 109,205,004 RGD:1600115
G Tmem33 transmembrane protein 33 JBrowse link 14 42,537,352 42,559,580 RGD:1600115
RGD:1624291
G Tpp1 tripeptidyl peptidase 1 JBrowse link 1 170,588,036 170,594,159 RGD:1600115
G Trpv2 transient receptor potential cation channel, subfamily V, member 2 JBrowse link 10 48,903,540 48,925,036 RGD:1600115
G Tyr tyrosinase JBrowse link 1 151,012,598 151,106,802 RGD:1600115
RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1624291
G Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta JBrowse link 3 160,391,108 160,399,931 RGD:1600115
G Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon JBrowse link 10 63,884,338 63,921,709 RGD:1600115
G Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta JBrowse link 7 75,573,546 75,598,295 RGD:1600115
melanosome membrane term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Dtnbp1 dystrobrevin binding protein 1 JBrowse link 17 20,090,136 20,182,332 RGD:1600115
G Gpr143 G protein-coupled receptor 143 JBrowse link X 23,668,363 23,693,162 RGD:1600115
RGD:1624291
G Oca2 OCA2 melanosomal transmembrane protein JBrowse link 1 114,661,970 114,987,433 RGD:1600115
RGD:1624291
G Rab7a RAB7A, member RAS oncogene family JBrowse link 4 119,910,466 119,963,065 RGD:1600115
G Th tyrosine hydroxylase JBrowse link 1 216,073,034 216,080,287 RGD:1600115
RGD:1624291
G Tyrp1 tyrosinase-related protein 1 JBrowse link 5 98,387,291 98,406,083 RGD:1600115
RGD:1624291

Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 356923
    organelle 158464
      membrane-bounded organelle 132862
        intracellular membrane-bounded organelle 116043
          cytoplasmic, membrane-bounded vesicle 5585
            pigment granule 296
              melanosome 296
                melanosome lumen 0
                melanosome membrane 26
Path 2
Term Annotations click to browse term
  cellular_component 356923
    cell 262310
      cell part 262004
        intracellular 202151
          intracellular part 199047
            cytoplasm 106883
              cytoplasmic part 82715
                cytoplasmic vesicle 6614
                  cytoplasmic, membrane-bounded vesicle 5585
                    pigment granule 296
                      melanosome 296
                        melanosome lumen 0
                        melanosome membrane 26
paths to the root