ONTOLOGY REPORT - ANNOTATIONS

Term:ribosome biogenesis
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Accession:GO:0042254 term browser browse the term
Definition:A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
Synonyms:exact_synonym: ribosome biogenesis and assembly
 related_synonym: ribosomal chaperone activity
 alt_id: GO:0007046
 xref_analog: Wikipedia:Ribosome_biogenesis

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ribosome biogenesis term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Aatf apoptosis antagonizing transcription factor GBrowse link ISO 10 72,701,724 72,794,495 RGD:1624291 RGD
G Aatf apoptosis antagonizing transcription factor GBrowse link IEA 10 72,701,724 72,794,495 RGD:1600115 ENSEMBL
G Abcf1 ATP-binding cassette, subfamily F (GCN20), member 1 GBrowse link NOT ISO 20 2,953,604 2,962,140 RGD:1624291 RGD
G Abcf1 ATP-binding cassette, subfamily F (GCN20), member 1 GBrowse link ISS 20 2,953,604 2,962,140 RGD:1600115 UniProtKB
G Bms1 BMS1 homolog, ribosome assembly protein (yeast) GBrowse link IEA 4 154,687,169 154,721,783 RGD:1600115 InterPro
G Brix1 BRX1, biogenesis of ribosomes, homolog (S. cerevisiae) GBrowse link IEA 2 59,826,894 59,837,772 RGD:1600115 UniProtKB
G Bysl bystin-like IEA RGD:1600115 UniProtKB
G Gnl1 guanine nucleotide binding protein-like 1 GBrowse link IBA 20 2,931,792 2,940,778 RGD:1600115 RefGenome
G Gnl2 guanine nucleotide binding protein-like 2 (nucleolar) GBrowse link IBA 5 144,373,848 144,399,235 RGD:1600115 RefGenome
G Gnl3 guanine nucleotide binding protein-like 3 (nucleolar) GBrowse link IBA 16 6,444,437 6,450,375 RGD:1600115 RefGenome
G Gnl3l guanine nucleotide binding protein-like 3 (nucleolar)-like GBrowse link IBA X 40,301,219 40,334,396 RGD:1600115 RefGenome
G Gtpbp4 GTP binding protein 4 GBrowse link IEA 17 72,100,899 72,120,636 RGD:1600115 UniProtKB
G Isg20l2 interferon stimulated exonuclease gene 20-like 2 GBrowse link IEA 2 180,009,276 180,018,762 RGD:1600115 UniProtKB
G LOC100361311 ribosomal protein L7a-like GBrowse link IEA 18 4,281,572 4,282,372 RGD:1600115 InterPro
G LOC100910109 60S ribosomal protein L7a-like IEA RGD:1600115 InterPro
G LOC100911966 60S ribosomal protein L7a-like IEA RGD:1600115 InterPro
G LOC100911987 60S ribosomal protein L7a-like IEA RGD:1600115 InterPro
G LOC680161 similar to 60S ribosomal protein L7a GBrowse link IEA 4 151,339,384 151,340,184 RGD:1600115 InterPro
G LOC685027 similar to 60S ribosomal protein L7a GBrowse link IEA 5 146,317,045 146,317,930 RGD:1600115 InterPro
G Lsg1 large subunit GTPase 1 homolog (S. cerevisiae) GBrowse link IBA 11 72,026,815 72,051,401 RGD:1600115 RefGenome
G Mina myc induced nuclear antigen GBrowse link IEA 11 41,626,321 41,649,489 RGD:1600115 UniProtKB
G Mrto4 mRNA turnover 4 homolog (S. cerevisiae) GBrowse link IEA 5 158,149,143 158,154,671 RGD:1600115 InterPro
G Naf1 nuclear assembly factor 1 ribonucleoprotein GBrowse link IEA 16 24,533,261 24,564,544 RGD:1600115 ENSEMBL
G Naf1 nuclear assembly factor 1 ribonucleoprotein GBrowse link ISO 16 24,533,261 24,564,544 RGD:1624291 RGD
G Naf1 nuclear assembly factor 1 ribonucleoprotein GBrowse link ISS 16 24,533,261 24,564,544 RGD:1600115 UniProtKB
G Nhp2l1 NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) GBrowse link IEA 7 120,425,064 120,430,031 RGD:1600115 InterPro
G Noa1 nitric oxide associated 1 GBrowse link IBA 14 33,107,963 33,123,993 RGD:1600115 RefGenome
G Noc4l nucleolar complex associated 4 homolog (S. cerevisiae) GBrowse link IEA 12 46,160,644 46,165,182 RGD:1600115 InterPro
G Paox polyamine oxidase (exo-N4-amino) GBrowse link IBA 1 199,909,816 199,934,938 RGD:1600115 RefGenome
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISO 14 84,616,451 84,632,831 RGD:1624291 RGD
G Rcl1 RNA terminal phosphate cyclase-like 1 GBrowse link IEA 1 232,766,489 232,787,901 RGD:1600115 InterPro
G RGD1559149 sim to 60S ribosomal protein L7a GBrowse link IEA 17 50,899,848 50,900,636 RGD:1600115 InterPro
G RGD1561919 similar to ribosomal protein S18 GBrowse link IBA 19 13,615,405 13,615,905 RGD:1600115 RefGenome
G RGD1562404 similar to ribosomal protein S18 GBrowse link IBA 7 69,341,481 69,341,939 RGD:1600115 RefGenome
G RGD1562409 similar to 60S ribosomal protein L7a GBrowse link IEA 3 54,960,565 54,961,365 RGD:1600115 InterPro
G RGD1562953 similar to Rpl7a protein GBrowse link IEA 1 267,291,684 267,292,484 RGD:1600115 InterPro
G RGD1563045 similar to 60S ribosomal protein L7a GBrowse link IEA 7 75,872,529 75,873,329 RGD:1600115 InterPro
G RGD1564370 similar to 60S ribosomal protein L7a GBrowse link IEA 20 41,432,697 41,433,497 RGD:1600115 InterPro
G RGD1564469 similar to Acidic ribosomal phosphoprotein P0 GBrowse link IEA 2 199,654,499 199,655,571 RGD:1600115 InterPro
G RGD1565912 similar to ribosomal protein S18 GBrowse link IBA 5 73,484,032 73,484,544 RGD:1600115 RefGenome
G RGD1566078 similar to NHP2-like protein 1 (High mobility group-like nuclear protein 2 homolog 1) (Sperm specific antigen 1) GBrowse link IEA X 158,765,373 158,765,759 RGD:1600115 InterPro
G Rpl7a ribosomal protein L7a GBrowse link IEA 18 5,807,901 5,810,543 RGD:1600115 InterPro
G Rplp0 ribosomal protein, large, P0 GBrowse link IEA 12 42,315,766 42,318,732 RGD:1600115 InterPro
G Rps18 ribosomal protein S18 GBrowse link IBA 20 5,083,626 5,087,304 RGD:1600115 RefGenome
G Rrn3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) GBrowse link ISO 10 1,492,181 1,527,197 RGD:1624291 RGD
G Rrs1 RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) GBrowse link IEA 5 9,304,448 9,306,081 RGD:1600115 UniProtKB
G Rsl24d1 ribosomal L24 domain containing 1 GBrowse link IEA 8 77,877,455 77,886,461 RGD:1600115 InterPro
G Rsl24d1 ribosomal L24 domain containing 1 GBrowse link IEA 8 77,877,455 77,886,461 RGD:1600115 UniProtKB
G Surf6 surfeit 6 GBrowse link ISO 3 5,790,323 5,801,072 RGD:1624291 RGD
G Tsr1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) GBrowse link IEA 10 62,207,449 62,218,861 RGD:1600115 InterPro
90S preribosome assembly term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Rpl38 ribosomal protein L38 GBrowse link ISO 10 104,545,644 104,549,279 RGD:1624291 RGD
cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bop1 block of proliferation 1 GBrowse link ISO 7 114,500,155 114,524,030 RGD:1624291 RGD
G Bop1 block of proliferation 1 GBrowse link IEA 7 114,500,155 114,524,030 RGD:1600115 ENSEMBL
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Rps21 ribosomal protein S21 GBrowse link IBA 3 169,311,205 169,312,227 RGD:1600115 RefGenome
G Rpsa ribosomal protein SA GBrowse link IBA 8 125,100,239 125,104,096 RGD:1600115 RefGenome
endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Rps21 ribosomal protein S21 GBrowse link IBA 3 169,311,205 169,312,227 RGD:1600115 RefGenome
G Rpsa ribosomal protein SA GBrowse link IBA 8 125,100,239 125,104,096 RGD:1600115 RefGenome
maturation of 5.8S rRNA term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G C1d C1D nuclear receptor co-repressor GBrowse link IEA 14 98,153,633 98,166,585 RGD:1600115 ENSEMBL
G C1d C1D nuclear receptor co-repressor GBrowse link ISO 14 98,153,633 98,166,585 RGD:1624291 RGD
G Exosc4 exosome component 4 GBrowse link IEA 7 114,374,913 114,377,655 RGD:1600115 ENSEMBL
G Exosc4 exosome component 4 GBrowse link ISO 7 114,374,913 114,377,655 RGD:1624291 RGD
G LOC313707 similar to exosome component 10 GBrowse link IEA 5 165,641,908 165,665,544 RGD:1600115 ENSEMBL
G Mphosph6 M phase phosphoprotein 6 ISO RGD:1624291 RGD
G Nol9 nucleolar protein 9 GBrowse link ISO 5 169,268,990 169,287,527 RGD:1624291 RGD
G Nol9 nucleolar protein 9 GBrowse link IEA 5 169,268,990 169,287,527 RGD:1600115 ENSEMBL
G Skiv2l2 superkiller viralicidic activity 2-like 2 (S. cerevisiae) GBrowse link ISO 2 44,247,683 44,306,293 RGD:1624291 RGD
maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISO 14 84,616,451 84,632,831 RGD:1624291 RGD
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISS 14 84,616,451 84,632,831 RGD:1600115 UniProtKB
G Wdr12 WD repeat domain 12 GBrowse link ISO 9 58,614,192 58,641,597 RGD:1624291 RGD
G Wdr12 WD repeat domain 12 GBrowse link ISS 9 58,614,192 58,641,597 RGD:1600115 UniProtKB
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bop1 block of proliferation 1 GBrowse link ISO 7 114,500,155 114,524,030 RGD:1624291 RGD
G Bop1 block of proliferation 1 GBrowse link ISS 7 114,500,155 114,524,030 RGD:1600115 UniProtKB
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISO 14 84,616,451 84,632,831 RGD:1624291 RGD
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISO 14 84,616,451 84,632,831 RGD:1624291 RGD
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISS 14 84,616,451 84,632,831 RGD:1600115 UniProtKB
G Wdr12 WD repeat domain 12 GBrowse link ISO 9 58,614,192 58,641,597 RGD:1624291 RGD
G Wdr12 WD repeat domain 12 GBrowse link ISO 9 58,614,192 58,641,597 RGD:1624291 RGD
G Wdr12 WD repeat domain 12 GBrowse link ISS 9 58,614,192 58,641,597 RGD:1600115 UniProtKB
maturation of SSU-rRNA term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Rps14 ribosomal protein S14 GBrowse link ISS 18 56,727,647 56,732,431 RGD:1600115 UniProtKB
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bysl bystin-like ISO RGD:1624291 RGD
G LOC100912267 40S ribosomal protein S24-like IBA RGD:1600115 RefGenome
G LOC297756 ribosomal protein S8-like GBrowse link IBA 5 2,501,289 2,505,579 RGD:1600115 RefGenome
G RGD1562937 similar to ribosomal protein S24 GBrowse link IBA 8 11,906,132 11,906,533 RGD:1600115 RefGenome
G RGD1564325 similar to ribosomal protein S24 GBrowse link IBA 16 6,759,333 6,759,734 RGD:1600115 RefGenome
G RGD1566369 similar to ribosomal protein S8 GBrowse link IBA 17 95,246,880 95,247,542 RGD:1600115 RefGenome
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
G Rps24 ribosomal protein S24 GBrowse link IBA 16 43,766 48,353 RGD:1600115 RefGenome
G Rps8 ribosomal protein S8 GBrowse link IBA 5 137,466,705 137,469,275 RGD:1600115 RefGenome
mature ribosome assembly term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G C1qbp complement component 1, q subcomponent binding protein GBrowse link ISS 10 57,881,783 57,886,434 RGD:1600115 UniProtKB
G C1qbp complement component 1, q subcomponent binding protein GBrowse link ISO 10 57,881,783 57,886,434 RGD:1624291 RGD
G Eftud1 elongation factor Tu GTP binding domain containing 1 GBrowse link ISO 1 138,920,620 139,044,342 RGD:1624291 RGD
G Eif6 eukaryotic translation initiation factor 6 IEA RGD:1600115 UniProtKB
G Sbds Shwachman-Bodian-Diamond syndrome GBrowse link ISO 12 27,457,313 27,466,472 RGD:1624291 RGD
G Sbds Shwachman-Bodian-Diamond syndrome GBrowse link ISS 12 27,457,313 27,466,472 RGD:1600115 UniProtKB
negative regulation of ribosome biogenesis term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Pten phosphatase and tensin homolog GBrowse link ISO 1 236,771,027 236,837,261 RGD:1624291 RGD
G Pten phosphatase and tensin homolog GBrowse link IEA 1 236,771,027 236,837,261 RGD:1600115 ENSEMBL
negative regulation of rRNA processing term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor GBrowse link IEA 4 135,478,202 135,571,298 RGD:1600115 ENSEMBL
G Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor GBrowse link ISO 4 135,478,202 135,571,298 RGD:1624291 RGD
ribosomal large subunit assembly term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Rpl24 ribosomal protein L24 GBrowse link ISO 11 45,628,842 45,634,050 RGD:1624291 RGD
ribosomal large subunit biogenesis term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bop1 block of proliferation 1 GBrowse link ISO 7 114,500,155 114,524,030 RGD:1624291 RGD
G Eif6 eukaryotic translation initiation factor 6 IEA RGD:1600115 UniProtKB
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 GBrowse link IEA 4 77,202,217 77,211,040 RGD:1600115 ENSEMBL
G Malsu1 mitochondrial assembly of ribosomal large subunit 1 GBrowse link ISO 4 77,202,217 77,211,040 RGD:1624291 RGD
G Npm1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) GBrowse link ISO 10 18,051,990 18,062,714 RGD:1624291 RGD
G Rpl11 ribosomal protein L11 GBrowse link ISO 5 154,826,973 154,830,183 RGD:1624291 RGD
G Rpl14 ribosomal protein L14 GBrowse link ISO 8 125,582,095 125,584,968 RGD:1624291 RGD
G Rpl26 ribosomal protein L26 GBrowse link ISO 10 55,662,220 55,665,752 RGD:1624291 RGD
G Rpl26 ribosomal protein L26 GBrowse link IEA 10 55,662,220 55,665,752 RGD:1600115 ENSEMBL
G Rpl35a ribosomal protein L35a GBrowse link ISO 1 6,574,161 6,574,576 RGD:1624291 RGD
G Rpl5l1 ribosomal protein L5-like 1 GBrowse link ISO 9 113,233,164 113,234,057 RGD:1624291 RGD
G Rpl7 ribosomal protein L7 GBrowse link ISO 5 2,315,766 2,318,774 RGD:1624291 RGD
G Sbds Shwachman-Bodian-Diamond syndrome GBrowse link IBA 12 27,457,313 27,466,472 RGD:1600115 RefGenome
G Sdad1 SDA1 domain containing 1 GBrowse link IEA 14 17,302,948 17,329,725 RGD:1600115 InterPro
ribosomal large subunit export from nucleus term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Npm1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) GBrowse link ISO 10 18,051,990 18,062,714 RGD:1624291 RGD
G Sdad1 SDA1 domain containing 1 GBrowse link IEA 14 17,302,948 17,329,725 RGD:1600115 InterPro
ribosomal small subunit assembly term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Eral1 Era (G-protein)-like 1 (E. coli) GBrowse link ISO 10 64,129,729 64,137,047 RGD:1624291 RGD
G Eral1 Era (G-protein)-like 1 (E. coli) GBrowse link IEA 10 64,129,729 64,137,047 RGD:1600115 ENSEMBL
G Eral1 Era (G-protein)-like 1 (E. coli) GBrowse link ISS 10 64,129,729 64,137,047 RGD:1600115 UniProtKB
G RGD1559955 similar to 40S ribosomal protein S17 GBrowse link IBA 9 97,909,269 97,909,676 RGD:1600115 RefGenome
G RGD1561635 similar to 40S ribosomal protein S17 GBrowse link IBA 13 70,473,910 70,474,503 RGD:1600115 RefGenome
G RGD1562381 similar to ribosomal protein S17 GBrowse link IBA 6 99,105,294 99,105,701 RGD:1600115 RefGenome
G Rps10 ribosomal protein S10 GBrowse link IMP 20 5,849,327 5,853,893 RGD:2299075 RGD
G Rps14 ribosomal protein S14 GBrowse link IMP 18 56,727,647 56,732,431 RGD:2299075 RGD
G Rps14 ribosomal protein S14 GBrowse link ISO 18 56,727,647 56,732,431 RGD:1624291 RGD
G Rps14 ribosomal protein S14 GBrowse link ISS 18 56,727,647 56,732,431 RGD:1600115 UniProtKB
G Rps15 ribosomal protein S15 GBrowse link IMP 7 10,927,341 10,928,780 RGD:2299075 RGD
G Rps17 ribosomal protein S17 GBrowse link IBA 1 137,552,232 137,554,817 RGD:1600115 RefGenome
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
G Rps2 ribosomal protein S2 GBrowse link IMP 10 13,975,350 13,977,199 RGD:2299075 RGD
G Rps25 ribosomal protein s25 GBrowse link IMP 8 47,374,303 47,376,679 RGD:2299075 RGD
G Rps6 ribosomal protein S6 GBrowse link IMP 5 106,165,612 106,168,472 RGD:2299075 RGD
G Rpsa ribosomal protein SA GBrowse link IBA 8 125,100,239 125,104,096 RGD:1600115 RefGenome
ribosomal small subunit biogenesis term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G LOC500148 similar to 40S ribosomal protein S7 (S8) GBrowse link IBA 4 87,346,842 87,356,105 RGD:1600115 RefGenome
G Npm1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) GBrowse link ISO 10 18,051,990 18,062,714 RGD:1624291 RGD
G Rps15 ribosomal protein S15 GBrowse link ISO 7 10,927,341 10,928,780 RGD:1624291 RGD
G Rps16 ribosomal protein S16 GBrowse link ISO 1 83,444,204 83,463,592 RGD:1624291 RGD
G Rps17 ribosomal protein S17 GBrowse link ISO 1 137,552,232 137,554,817 RGD:1624291 RGD
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
G Rps21 ribosomal protein S21 GBrowse link IBA 3 169,311,205 169,312,227 RGD:1600115 RefGenome
G Rps24 ribosomal protein S24 GBrowse link ISO 16 43,766 48,353 RGD:1624291 RGD
G Rps24 ribosomal protein S24 GBrowse link ISO 16 43,766 48,353 RGD:1624291 RGD
G Rps28 ribosomal protein S28 GBrowse link ISO 7 16,319,719 16,321,088 RGD:1624291 RGD
G Rps28 ribosomal protein S28 GBrowse link IEA 7 16,319,719 16,321,088 RGD:1600115 ENSEMBL
G Rps6 ribosomal protein S6 GBrowse link ISO 5 106,165,612 106,168,472 RGD:1624291 RGD
G Rps6 ribosomal protein S6 GBrowse link ISO 5 106,165,612 106,168,472 RGD:1624291 RGD
G Rps7 ribosomal protein S7 GBrowse link ISO 6 46,511,961 46,516,825 RGD:1624291 RGD
G Rps7 ribosomal protein S7 GBrowse link IBA 6 46,511,961 46,516,825 RGD:1600115 RefGenome
G Rrp36 ribosomal RNA processing 36 homolog (S. cerevisiae) GBrowse link IEA 9 10,037,710 10,045,591 RGD:1600115 ENSEMBL
G Rrp36 ribosomal RNA processing 36 homolog (S. cerevisiae) GBrowse link ISO 9 10,037,710 10,045,591 RGD:1624291 RGD
ribosomal small subunit export from nucleus term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Npm1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) GBrowse link ISO 10 18,051,990 18,062,714 RGD:1624291 RGD
G Rps15 ribosomal protein S15 GBrowse link ISO 7 10,927,341 10,928,780 RGD:1624291 RGD
ribosomal subunit export from nucleus term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Eif6 eukaryotic translation initiation factor 6 IEA RGD:1600115 UniProtKB
ribosome assembly term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Eif2a eukaryotic translation initiation factor 2A GBrowse link ISO 2 147,870,265 147,903,411 RGD:1624291 RGD
G Mterfd2 MTERF domain containing 2 GBrowse link ISO 9 92,572,064 92,576,740 RGD:1624291 RGD
G Mterfd2 MTERF domain containing 2 GBrowse link IEA 9 92,572,064 92,576,740 RGD:1600115 ENSEMBL
G Nip7 NIP7, nucleolar pre-rRNA processing protein GBrowse link IEA 19 36,915,152 36,917,294 RGD:1600115 InterPro
rRNA 3'-end processing term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Eri1 exoribonuclease 1 GBrowse link ISO 16 60,422,764 60,442,317 RGD:1624291 RGD
G Eri1 exoribonuclease 1 GBrowse link ISS 16 60,422,764 60,442,317 RGD:1600115 UniProtKB
rRNA export from nucleus term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Npm1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) GBrowse link ISO 10 18,051,990 18,062,714 RGD:1624291 RGD
G Rps28 ribosomal protein S28 GBrowse link IBA 7 16,319,719 16,321,088 RGD:1600115 RefGenome
G Rpsa ribosomal protein SA GBrowse link IBA 8 125,100,239 125,104,096 RGD:1600115 RefGenome
G Tsc1 tuberous sclerosis 1 GBrowse link ISO 3 7,645,313 7,672,944 RGD:1624291 RGD
G Tsc1 tuberous sclerosis 1 GBrowse link IEA 3 7,645,313 7,672,944 RGD:1600115 ENSEMBL
rRNA methylation term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Nop58 NOP58 ribonucleoprotein GBrowse link NAS 9 58,255,685 58,279,522 RGD:633515 GOC
rRNA modification term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Nop58 NOP58 ribonucleoprotein GBrowse link NAS 9 58,255,685 58,279,522 RGD:633515 RGD
rRNA processing term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bop1 block of proliferation 1 GBrowse link ISO 7 114,500,155 114,524,030 RGD:1624291 RGD
G Bop1 block of proliferation 1 GBrowse link ISO 7 114,500,155 114,524,030 RGD:1624291 RGD
G Cdkn2a cyclin-dependent kinase inhibitor 2A GBrowse link IEA 5 108,908,749 108,916,380 RGD:1600115 UniProtKB
G Ddx47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 GBrowse link IEA 4 171,928,195 171,940,648 RGD:1600115 ENSEMBL
G Ddx52 DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 GBrowse link TAS 10 72,222,689 72,245,419 RGD:704356 RGD
G Ddx56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 GBrowse link TAS 14 86,985,893 86,994,552 RGD:1331361 RGD
G Dkc1 dyskeratosis congenita 1, dyskerin IEA RGD:1600115 UniProtKB
G Eif4a3 eukaryotic translation initiation factor 4A, isoform 3 IEA RGD:1600115 UniProtKB
G Exosc3 exosome component 3 GBrowse link ISO 5 61,880,622 61,883,825 RGD:1624291 RGD
G Exosc9 exosome component 9 GBrowse link IEA 2 123,051,592 123,062,494 RGD:1600115 UniProtKB
G Fbl fibrillarin GBrowse link IEA 1 83,271,967 83,281,069 RGD:1600115 UniProtKB
G Fbll1 fibrillarin-like 1 GBrowse link IEA 10 20,709,269 20,710,912 RGD:1600115 InterPro
G Ftsj3 FtsJ homolog 3 (E. coli) GBrowse link IEA 10 95,644,169 95,650,613 RGD:1600115 UniProtKB
G Gar1 GAR1 ribonucleoprotein homolog (yeast) GBrowse link IEA 2 227,267,775 227,275,054 RGD:1600115 UniProtKB
G Imp3 IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast) GBrowse link ISO 8 60,685,389 60,686,277 RGD:1624291 RGD
G Imp4 IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast) GBrowse link IEA 9 33,179,406 33,184,544 RGD:1600115 UniProtKB
G Krr1 KRR1, small subunit (SSU) processome component, homolog (yeast) GBrowse link IEA 7 51,069,927 51,081,361 RGD:1600115 UniProtKB
G LOC500148 similar to 40S ribosomal protein S7 (S8) GBrowse link IBA 4 87,346,842 87,356,105 RGD:1600115 RefGenome
G Mphosph10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) GBrowse link IEA 1 118,815,636 118,832,462 RGD:1600115 InterPro
G Mterfd2 MTERF domain containing 2 GBrowse link IEA 9 92,572,064 92,576,740 RGD:1600115 UniProtKB
G Naf1 nuclear assembly factor 1 ribonucleoprotein GBrowse link IEA 16 24,533,261 24,564,544 RGD:1600115 UniProtKB
G Nol8 nucleolar protein 8 GBrowse link ISO 17 20,945,380 20,968,740 RGD:1624291 RGD
G Nop2 NOP2 nucleolar protein GBrowse link IEA 4 161,252,117 161,264,321 RGD:1600115 InterPro
G Npm3 nucleophosmin/nucleoplasmin, 3 GBrowse link ISO 1 250,961,968 250,963,813 RGD:1624291 RGD
G Npm3 nucleophosmin/nucleoplasmin, 3 GBrowse link IEA 1 250,961,968 250,963,813 RGD:1600115 ENSEMBL
G Nsa2 NSA2 ribosome biogenesis homolog (S. cerevisiae) GBrowse link IEA 2 27,607,595 27,614,436 RGD:1600115 UniProtKB
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISO 14 84,616,451 84,632,831 RGD:1624291 RGD
G Pes1 pescadillo ribosomal biogenesis factor 1 GBrowse link ISO 14 84,616,451 84,632,831 RGD:1624291 RGD
G Pop4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae) GBrowse link IEA 1 90,749,092 90,757,426 RGD:1600115 InterPro
G Rbfa ribosome binding factor A GBrowse link IEA 18 77,085,514 77,094,869 RGD:1600115 InterPro
G Rnasel ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent) GBrowse link IDA 13 68,822,013 68,829,264 RGD:2291995 RGD
G Rpf1 ribosome production factor 1 homolog (S. cerevisiae) GBrowse link IEA 2 244,711,216 244,725,738 RGD:1600115 UniProtKB
G Rpl11 ribosomal protein L11 GBrowse link ISO 5 154,826,973 154,830,183 RGD:1624291 RGD
G Rpl14 ribosomal protein L14 GBrowse link ISO 8 125,582,095 125,584,968 RGD:1624291 RGD
G Rpl26 ribosomal protein L26 GBrowse link ISO 10 55,662,220 55,665,752 RGD:1624291 RGD
G Rpl26 ribosomal protein L26 GBrowse link IEA 10 55,662,220 55,665,752 RGD:1600115 ENSEMBL
G Rpl35a ribosomal protein L35a GBrowse link ISO 1 6,574,161 6,574,576 RGD:1624291 RGD
G Rpl5l1 ribosomal protein L5-like 1 GBrowse link ISO 9 113,233,164 113,234,057 RGD:1624291 RGD
G Rpl7 ribosomal protein L7 GBrowse link ISO 5 2,315,766 2,318,774 RGD:1624291 RGD
G Rps15 ribosomal protein S15 GBrowse link ISO 7 10,927,341 10,928,780 RGD:1624291 RGD
G Rps16 ribosomal protein S16 GBrowse link ISO 1 83,444,204 83,463,592 RGD:1624291 RGD
G Rps17 ribosomal protein S17 GBrowse link ISO 1 137,552,232 137,554,817 RGD:1624291 RGD
G Rps19 ribosomal protein S19 GBrowse link ISO 1 80,176,649 80,182,351 RGD:1624291 RGD
G Rps24 ribosomal protein S24 GBrowse link ISO 16 43,766 48,353 RGD:1624291 RGD
G Rps24 ribosomal protein S24 GBrowse link ISO 16 43,766 48,353 RGD:1624291 RGD
G Rps28 ribosomal protein S28 GBrowse link ISO 7 16,319,719 16,321,088 RGD:1624291 RGD
G Rps28 ribosomal protein S28 GBrowse link IEA 7 16,319,719 16,321,088 RGD:1600115 ENSEMBL
G Rps6 ribosomal protein S6 GBrowse link ISO 5 106,165,612 106,168,472 RGD:1624291 RGD
G Rps6 ribosomal protein S6 GBrowse link IBA 5 106,165,612 106,168,472 RGD:1600115 RefGenome
G Rps6 ribosomal protein S6 GBrowse link ISO 5 106,165,612 106,168,472 RGD:1624291 RGD
G Rps6 ribosomal protein S6 GBrowse link ISO 5 106,165,612 106,168,472 RGD:1624291 RGD
G Rps7 ribosomal protein S7 GBrowse link ISO 6 46,511,961 46,516,825 RGD:1624291 RGD
G Rps7 ribosomal protein S7 GBrowse link IBA 6 46,511,961 46,516,825 RGD:1600115 RefGenome
G Rrp1 ribosomal RNA processing 1 homolog (S. cerevisiae) GBrowse link IEA 20 10,594,298 10,606,945 RGD:1600115 InterPro
G Rrp1b ribosomal RNA processing 1 homolog B (S. cerevisiae) GBrowse link IEA 20 10,454,161 10,478,482 RGD:1600115 InterPro
G Rrp36 ribosomal RNA processing 36 homolog (S. cerevisiae) GBrowse link IEA 9 10,037,710 10,045,591 RGD:1600115 ENSEMBL
G Rrp36 ribosomal RNA processing 36 homolog (S. cerevisiae) GBrowse link ISO 9 10,037,710 10,045,591 RGD:1624291 RGD
G Rrp8 ribosomal RNA processing 8, methyltransferase, homolog (yeast) GBrowse link IEA 1 163,477,028 163,481,051 RGD:1600115 UniProtKB
G Sbds Shwachman-Bodian-Diamond syndrome GBrowse link ISO 12 27,457,313 27,466,472 RGD:1624291 RGD
G Sbds Shwachman-Bodian-Diamond syndrome GBrowse link IBA 12 27,457,313 27,466,472 RGD:1600115 RefGenome
G Tbl3 transducin (beta)-like 3 GBrowse link IEA 10 13,953,946 13,959,159 RGD:1600115 InterPro
G Tsr3 TSR3, 20S rRNA accumulation GBrowse link IEA 10 14,487,946 14,490,508 RGD:1600115 UniProtKB
G Utp11l UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) GBrowse link IEA 5 144,003,627 144,018,513 RGD:1600115 InterPro
G Utp11l UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast) GBrowse link IEA 5 144,003,627 144,018,513 RGD:1600115 UniProtKB
G Utp14a UTP14, U3 small nucleolar ribonucleoprotein, homolog A (yeast) GBrowse link IEA X 134,625,490 134,653,441 RGD:1600115 InterPro
G Utp15 UTP15, U3 small nucleolar ribonucleoprotein, homolog (S. cerevisiae) GBrowse link IEA 2 28,837,115 28,853,532 RGD:1600115 UniProtKB
G Utp20 UTP20, small subunit (SSU) processome component, homolog (yeast) GBrowse link ISO 7 25,419,625 25,501,987 RGD:1624291 RGD
G Wbp11 WW domain binding protein 11 GBrowse link IEA 4 173,823,936 173,837,308 RGD:1600115 UniProtKB
G Wdr36 WD repeat domain 36 GBrowse link IEA 18 25,294,369 25,322,294 RGD:1600115 InterPro
G Wdr55 WD repeat domain 55 GBrowse link ISO 18 29,461,320 29,464,833 RGD:1624291 RGD
G Wdr55 WD repeat domain 55 GBrowse link ISS 18 29,461,320 29,464,833 RGD:1600115 UniProtKB
G Ybey ybeY metallopeptidase GBrowse link IEA 20 12,580,868 12,590,344 RGD:1600115 InterPro
Term paths to the root
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Term Annotations click to browse term
  biological_process 135967
    cellular component organization or biogenesis 12039
      cellular component biogenesis 3204
        ribonucleoprotein complex biogenesis 366
          ribosome biogenesis 240
            negative regulation of ribosome biogenesis 2
            positive regulation of ribosome biogenesis 0
            rRNA export from nucleus 5
            rRNA processing + 118
            regulation of ribosome biogenesis + 4
            ribosomal large subunit biogenesis + 26
            ribosomal small subunit biogenesis + 52
            ribosomal subunit export from nucleus + 5
            ribosome assembly + 29
paths to the root

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