regulation of transcription elongation from RNA polymerase II promoter - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	regulation of transcription elongation from RNA polymerase II promoter	go back to main search page
Accession:	GO:0034243	browse the term
Definition:	Any process that modulates the frequency, rate or extent of transcription elongation, the extension of an RNA molecule after transcription initiation and promoter clearance by the addition of ribonucleotides, catalyzed by RNA polymerase II.
Synonyms:	exact_synonym:	regulation of RNA elongation from RNA polymerase II promoter
	related_synonym:	regulation of gene-specific transcription elongation from RNA polymerase II promoter
	alt_id:	GO:0090039

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negative regulation of transcription elongation from RNA polymerase II promoter
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		IEA	10	15,409,373	15,462,726	RGD:1600115	ENSEMBL
G	Eapp	E2F-associated phosphoprotein		IEA	6	74,985,403	75,012,635	RGD:1600115	ENSEMBL
G	Eapp	E2F-associated phosphoprotein		ISO	6	74,985,403	75,012,635	RGD:1624291	RGD
G	Ezh2	enhancer of zeste homolog 2 (Drosophila)		ISO	4	75,709,959	75,773,279	RGD:1624291	RGD
G	Ezh2	enhancer of zeste homolog 2 (Drosophila)		IEA	4	75,709,959	75,773,279	RGD:1600115	ENSEMBL
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)		IMP	6	96,419,024	96,463,891	RGD:5147880	RGD
G	Nelfa	negative elongation factor complex member A		ISO	14	82,502,840	82,526,916	RGD:1624291	RGD
G	Nelfa	negative elongation factor complex member A		IEA	14	82,502,840	82,526,916	RGD:1600115	ENSEMBL
G	Nelfe	negative elongation factor complex member E		ISO	20	4,077,925	4,081,561	RGD:1624291	RGD
G	Nelfe	negative elongation factor complex member E		IEA	20	4,077,925	4,081,561	RGD:1600115	ENSEMBL
G	Shh	sonic hedgehog		ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Shh	sonic hedgehog		IEA	4	2,200,504	2,209,657	RGD:1600115	ENSEMBL
G	Supt4h1	suppressor of Ty 4 homolog 1 (S. cerevisiae)		IEA	10	76,030,806	76,036,988	RGD:1600115	ENSEMBL
G	Supt4h1	suppressor of Ty 4 homolog 1 (S. cerevisiae)		ISO	10	76,030,806	76,036,988	RGD:1624291	RGD
positive regulation of transcription elongation from RNA polymerase II promoter
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Brd4	bromodomain containing 4		IEA	7	12,772,428	12,853,406	RGD:1600115	ENSEMBL
G	Brd4	bromodomain containing 4		ISO	7	12,772,428	12,853,406	RGD:1624291	RGD
G	Cdc73	cell division cycle 73		IEA	13	57,441,674	57,534,385	RGD:1600115	ENSEMBL
G	Cdc73	cell division cycle 73		ISO	13	57,441,674	57,534,385	RGD:1624291	RGD
G	Cdc73	cell division cycle 73		ISS	13	57,441,674	57,534,385	RGD:1600115	UniProtKB
G	Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		IEA	1	168,784,355	168,814,971	RGD:1600115	ENSEMBL
G	Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISO	1	168,784,355	168,814,971	RGD:1624291	RGD
G	Dab2	disabled 2, mitogen-responsive phosphoprotein		ISO	2	55,714,874	55,736,370	RGD:1624291	RGD
G	Eapp	E2F-associated phosphoprotein		IEA	6	74,985,403	75,012,635	RGD:1600115	ENSEMBL
G	Eapp	E2F-associated phosphoprotein		ISO	6	74,985,403	75,012,635	RGD:1624291	RGD
G	Leo1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISO	8	80,266,160	80,290,547	RGD:1624291	RGD
G	Leo1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISS	8	80,266,160	80,290,547	RGD:1600115	UniProtKB
G	Map2k1	mitogen activated protein kinase kinase 1		IMP	8	68,379,074	68,451,554	RGD:2292639	RGD
G	Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)		ISO	1	83,501,213	83,506,791	RGD:1624291	RGD
G	Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)		ISS	1	83,501,213	83,506,791	RGD:1600115	UniProtKB
G	Rtf1	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		IEA	3	106,190,937	106,250,416	RGD:1600115	ENSEMBL
G	Supt5h	suppressor of Ty 5 homolog (S. cerevisiae)		IEA	1	83,433,056	83,434,029	RGD:1600115	InterPro
G	Tceb1	transcription elongation factor B (SIII), polypeptide 1		IDA	5	1,961,106	1,966,991	RGD:730008	RGD
G	Wdr61	WD repeat domain 61		ISS	8	58,268,875	58,286,551	RGD:1600115	UniProtKB
G	Wdr61	WD repeat domain 61		ISO	8	58,268,875	58,286,551	RGD:1624291	RGD

Term paths to the root

Path 1
Term	Annotations
biological_process	136531
metabolic process	36512
regulation of metabolic process	16743
regulation of macromolecule metabolic process	13752
regulation of gene expression	9589
regulation of transcription, DNA-dependent	7718
regulation of transcription from RNA polymerase II promoter	4055
regulation of transcription elongation from RNA polymerase II promoter	36
negative regulation of transcription elongation from RNA polymerase II promoter	16
positive regulation of transcription elongation from RNA polymerase II promoter	20
Path 2
Term	Annotations
biological_process	136531
metabolic process	36512
cellular metabolic process	30527
cellular aromatic compound metabolic process	15094
nucleobase-containing compound metabolic process	14486
nucleic acid metabolic process	12512
RNA metabolic process	10231
RNA biosynthetic process	8851
regulation of RNA biosynthetic process	7779
regulation of transcription, DNA-dependent	7718
regulation of DNA-dependent transcription, elongation	55
regulation of transcription elongation from RNA polymerase II promoter	36
negative regulation of transcription elongation from RNA polymerase II promoter	16
positive regulation of transcription elongation from RNA polymerase II promoter	20