protein modification by small protein conjugation - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	protein modification by small protein conjugation	go back to main search page
Accession:	GO:0032446	browse the term
Definition:	A protein modification process in which one or more groups of a small protein, such as ubiquitin or a ubiquitin-like protein, are covalently attached to a target protein.

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protein modification by small protein conjugation
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Atg10	autophagy related 10		IEA	2	21,076,289	21,374,627	RGD:1600115	ENSEMBL
G	Atg10	autophagy related 10		ISO	2	21,076,289	21,374,627	RGD:1624291	RGD
G	Atg7	autophagy related 7		ISO	4	150,814,706	150,992,704	RGD:1624291	RGD
G	Atg7	autophagy related 7		IEA	4	150,814,706	150,992,704	RGD:1600115	ENSEMBL
activation of anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cdc14b	cell division cycle 14B		ISO	17	6,371,204	6,454,460	RGD:1624291	RGD
G	Cdc14b	cell division cycle 14B		IEA	17	6,371,204	6,454,460	RGD:1600115	ENSEMBL
G	Cdc20	cell division cycle 20		ISO	5	138,913,180	138,916,744	RGD:1624291	RGD
G	Cdc20	cell division cycle 20		ISS	5	138,913,180	138,916,744	RGD:1600115	UniProtKB
G	Fzr1	fizzy/cell division cycle 20 related 1 (Drosophila)		IEA	7	9,816,491	9,829,006	RGD:1600115	ENSEMBL
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
activation of mitotic anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Plk1	polo-like kinase 1		ISO	1	181,002,811	181,012,741	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISS	1	181,002,811	181,012,741	RGD:1600115	UniProtKB
G	Pten	phosphatase and tensin homolog		ISO	1	236,771,027	236,837,261	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog		ISO	1	236,771,027	236,837,261	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog		IEA	1	236,771,027	236,837,261	RGD:1600115	ENSEMBL
G	Pten	phosphatase and tensin homolog		IEA	1	236,771,027	236,837,261	RGD:1600115	ENSEMBL
histone H2A K63-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISS	11	70,304,917	70,328,010	RGD:1600115	UniProtKB
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
histone H2A monoubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bcor	BCL6 co-repressor		IEA	X	22,699,778	22,820,234	RGD:1600115	ENSEMBL
G	Bcor	BCL6 co-repressor		ISO	X	22,699,778	22,820,234	RGD:1624291	RGD
G	Kdm2b	lysine (K)-specific demethylase 2B		ISO	12	34,672,334	34,802,802	RGD:1624291	RGD
G	Pcgf1	polycomb group ring finger 1		IEA	4	117,290,410	117,292,999	RGD:1600115	ENSEMBL
G	Pcgf1	polycomb group ring finger 1		ISO	4	117,290,410	117,292,999	RGD:1624291	RGD
G	Ring1	ring finger protein 1		ISO	20	4,968,251	4,972,149	RGD:1624291	RGD
G	Ring1	ring finger protein 1		IEA	20	4,968,251	4,972,149	RGD:1600115	ENSEMBL
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISS	11	70,304,917	70,328,010	RGD:1600115	UniProtKB
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf2	ring finger protein 2		ISO	13	66,345,663	66,373,826	RGD:1624291	RGD
G	Rnf2	ring finger protein 2		IEA	13	66,345,663	66,373,826	RGD:1600115	ENSEMBL
G	Rybp	RING1 and YY1 binding protein		IEA	4	135,101,700	135,153,427	RGD:1600115	ENSEMBL
G	Skp1	S-phase kinase-associated protein 1		ISO	10	37,665,417	37,680,338	RGD:1624291	RGD
G	Skp1	S-phase kinase-associated protein 1		IEA	10	37,665,417	37,680,338	RGD:1600115	ENSEMBL
histone H2A ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
G	Ube2a	ubiquitin-conjugating enzyme E2A		ISO	X	7,981,683	7,992,372	RGD:1624291	RGD
G	Ube2a	ubiquitin-conjugating enzyme E2A		IEA	X	7,981,683	7,992,372	RGD:1600115	ENSEMBL
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		IEA	10	37,509,322	37,523,900	RGD:1600115	ENSEMBL
G	Ubr2	ubiquitin protein ligase E3 component n-recognin 2		ISO	9	9,165,363	9,247,261	RGD:1624291	RGD
histone H2A-K13 ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISS	11	70,304,917	70,328,010	RGD:1600115	UniProtKB
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
histone H2A-K15 ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISS	11	70,304,917	70,328,010	RGD:1600115	UniProtKB
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
histone H2B ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cdc73	cell division cycle 73		ISO	13	57,441,674	57,534,385	RGD:1624291	RGD
G	Cdc73	cell division cycle 73		IEA	13	57,441,674	57,534,385	RGD:1600115	ENSEMBL
G	Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISO	1	168,784,355	168,814,971	RGD:1624291	RGD
G	Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		IEA	1	168,784,355	168,814,971	RGD:1600115	ENSEMBL
G	Leo1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISO	8	80,266,160	80,290,547	RGD:1624291	RGD
G	Leo1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		IEA	8	80,266,160	80,290,547	RGD:1600115	ENSEMBL
G	LOC100366017	ubiquitin-conjugating enzyme E2E 1-like		IEA				RGD:1600115	ENSEMBL
G	Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)		ISO	1	83,501,213	83,506,791	RGD:1624291	RGD
G	Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)		IEA	1	83,501,213	83,506,791	RGD:1600115	ENSEMBL
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		IEA	5	66,371,470	66,397,538	RGD:1600115	ENSEMBL
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		ISO	5	66,371,470	66,397,538	RGD:1624291	RGD
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		ISO	5	66,371,470	66,397,538	RGD:1624291	RGD
G	Rnf40	ring finger protein 40, E3 ubiquitin protein ligase		ISO	1	186,876,103	186,890,731	RGD:1624291	RGD
G	Rnf40	ring finger protein 40, E3 ubiquitin protein ligase		IEA	1	186,876,103	186,890,731	RGD:1600115	ENSEMBL
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
histone monoubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cdc73	cell division cycle 73		ISO	13	57,441,674	57,534,385	RGD:1624291	RGD
G	Cdc73	cell division cycle 73		IEA	13	57,441,674	57,534,385	RGD:1600115	ENSEMBL
G	Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISO	1	168,784,355	168,814,971	RGD:1624291	RGD
G	Ctr9	Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		IEA	1	168,784,355	168,814,971	RGD:1600115	ENSEMBL
G	Dtx3l	deltex 3-like (Drosophila)		IEA	11	66,649,508	66,659,119	RGD:1600115	ENSEMBL
G	Dtx3l	deltex 3-like (Drosophila)		ISO	11	66,649,508	66,659,119	RGD:1624291	RGD
G	Leo1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		ISO	8	80,266,160	80,290,547	RGD:1624291	RGD
G	Leo1	Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)		IEA	8	80,266,160	80,290,547	RGD:1600115	ENSEMBL
G	LOC100366017	ubiquitin-conjugating enzyme E2E 1-like		IEA				RGD:1600115	ENSEMBL
G	Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)		ISO	1	83,501,213	83,506,791	RGD:1624291	RGD
G	Paf1	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)		IEA	1	83,501,213	83,506,791	RGD:1600115	ENSEMBL
G	Rag1	recombination activating gene 1		IDA	3	86,780,782	86,791,878	RGD:2290270	UniProtKB
G	Rag1	recombination activating gene 1		ISO	3	86,780,782	86,791,878	RGD:1624291	RGD
G	Rag1	recombination activating gene 1		IEA	3	86,780,782	86,791,878	RGD:1600115	ENSEMBL
G	Rag1	recombination activating gene 1		ISO	3	86,780,782	86,791,878	RGD:2290270	RGD
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		IEA	5	66,371,470	66,397,538	RGD:1600115	ENSEMBL
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		ISO	5	66,371,470	66,397,538	RGD:1624291	RGD
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		ISO	5	66,371,470	66,397,538	RGD:1624291	RGD
G	Rnf40	ring finger protein 40, E3 ubiquitin protein ligase		ISO	1	186,876,103	186,890,731	RGD:1624291	RGD
G	Rnf40	ring finger protein 40, E3 ubiquitin protein ligase		IEA	1	186,876,103	186,890,731	RGD:1600115	ENSEMBL
G	Uhrf1	ubiquitin-like with PHD and ring finger domains 1		ISO				RGD:1624291	RGD
G	Uhrf1	ubiquitin-like with PHD and ring finger domains 1		IEA				RGD:1600115	ENSEMBL
histone ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bmi1	Bmi1 polycomb ring finger oncogene		ISO	17	92,784,216	92,787,947	RGD:1624291	RGD
G	Bmi1	Bmi1 polycomb ring finger oncogene		IEA	17	92,784,216	92,787,947	RGD:1600115	ENSEMBL
G	Cbx8	chromobox homolog 8		ISO				RGD:1624291	RGD
G	Cbx8	chromobox homolog 8		IEA				RGD:1600115	ENSEMBL
G	LOC501546	hypothetical protein LOC501546		ISS	X	41,269,837	41,397,687	RGD:1600115	UniProtKB
G	Ring1	ring finger protein 1		ISO	20	4,968,251	4,972,149	RGD:1624291	RGD
G	Ring1	ring finger protein 1		ISO	20	4,968,251	4,972,149	RGD:1624291	RGD
G	Rnf2	ring finger protein 2		ISO	13	66,345,663	66,373,826	RGD:1624291	RGD
G	Rnf2	ring finger protein 2		ISO	13	66,345,663	66,373,826	RGD:1624291	RGD
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		ISO	5	66,371,470	66,397,538	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Uhrf1	ubiquitin-like with PHD and ring finger domains 1		ISO				RGD:1624291	RGD
G	Uhrf1	ubiquitin-like with PHD and ring finger domains 1		ISS				RGD:1600115	UniProtKB
G	Usp22	ubiquitin specific peptidase 22		IEA	10	47,303,727	47,327,738	RGD:1600115	ENSEMBL
G	Usp22	ubiquitin specific peptidase 22		ISO	10	47,303,727	47,327,738	RGD:1624291	RGD
inhibition of mitotic anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Fbxo5	F-box protein 5		IEA	1	36,492,134	36,498,503	RGD:1600115	ENSEMBL
G	Fbxo5	F-box protein 5		ISO	1	36,492,134	36,498,503	RGD:1624291	RGD
negative regulation of histone H2A K63-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Otub1	OTU domain, ubiquitin aldehyde binding 1		ISS	1	209,871,581	209,879,518	RGD:1600115	UniProtKB
G	Otub1	OTU domain, ubiquitin aldehyde binding 1		ISO	1	209,871,581	209,879,518	RGD:1624291	RGD
G	Trip12	thyroid hormone receptor interactor 12		ISS	9	83,961,411	84,085,077	RGD:1600115	UniProtKB
G	Trip12	thyroid hormone receptor interactor 12		ISO	9	83,961,411	84,085,077	RGD:1624291	RGD
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5		ISO	7	73,467,676	73,545,246	RGD:1624291	RGD
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5		ISS	7	73,467,676	73,545,246	RGD:1600115	UniProtKB
negative regulation of mitotic anaphase-promoting complex activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast)		ISO	4	96,380,039	96,386,042	RGD:1624291	RGD
G	Mad2l1	MAD2 mitotic arrest deficient-like 1 (yeast)		IEA	4	96,380,039	96,386,042	RGD:1600115	ENSEMBL
G	Mad2l2	MAD2 mitotic arrest deficient-like 2 (yeast)		ISS	5	165,218,362	165,222,828	RGD:1600115	UniProtKB
G	Usp44	ubiquitin specific peptidase 44		IEA	7	30,898,472	30,971,342	RGD:1600115	ENSEMBL
negative regulation of protein ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arrb1	arrestin, beta 1		ISO	1	156,871,564	156,937,540	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		ISO	10	57,244,071	57,284,166	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		IMP	10	57,244,071	57,284,166	RGD:5509917	RGD
G	Atg5	autophagy related 5		ISO	20	48,273,977	48,366,743	RGD:1624291	RGD
G	Atg5	autophagy related 5		IEA	20	48,273,977	48,366,743	RGD:1600115	ENSEMBL
G	Bag5	BCL2-associated athanogene 5		IDA	6	136,491,438	136,495,093		BHF-UCL
G	Cav1	caveolin 1, caveolae protein		ISO	4	42,956,102	42,989,057	RGD:1624291	RGD
G	Cav1	caveolin 1, caveolae protein		ISO	4	42,956,102	42,989,057	RGD:1624291	RGD
G	Cav1	caveolin 1, caveolae protein		IEA	4	42,956,102	42,989,057	RGD:1600115	ENSEMBL
G	Ccdc23	coiled-coil domain containing 23		ISO	5	139,782,652	139,788,289	RGD:1624291	RGD
G	Ccdc23	coiled-coil domain containing 23		IEA	5	139,782,652	139,788,289	RGD:1600115	ENSEMBL
G	Cdk5	cyclin-dependent kinase 5		ISO	4	6,119,704	6,124,186	RGD:1624291	RGD
G	Cdk5	cyclin-dependent kinase 5		IEA	4	6,119,704	6,124,186	RGD:1600115	ENSEMBL
G	Chp	calcium binding protein p22		IDA	3	106,066,389	106,101,635		UniProtKB
G	Gclc	glutamate-cysteine ligase, catalytic subunit		ISO	8	82,724,429	82,762,848	RGD:1624291	RGD
G	Gclc	glutamate-cysteine ligase, catalytic subunit		IEA	8	82,724,429	82,762,848	RGD:1600115	ENSEMBL
G	Glmn	glomulin, FKBP associated protein		ISO	14	2,744,359	2,789,190	RGD:1624291	RGD
G	Gtpbp4	GTP binding protein 4		ISO	17	72,100,899	72,120,636	RGD:1624291	RGD
G	Gtpbp4	GTP binding protein 4		ISS	17	72,100,899	72,120,636	RGD:1600115	HGNC
G	N4bp1	Nedd4 binding protein 1		ISO	19	21,560,480	21,607,541	RGD:1624291	RGD
G	N4bp1	Nedd4 binding protein 1		IEA	19	21,560,480	21,607,541	RGD:1600115	ENSEMBL
G	Nxn	nucleoredoxin		ISO	10	67,775,938	67,913,018	RGD:1624291	RGD
G	Prkcg	protein kinase C, gamma		ISO	1	64,145,749	64,172,712	RGD:1624291	RGD
G	Prkcg	protein kinase C, gamma		IEA	1	64,145,749	64,172,712	RGD:1600115	ENSEMBL
G	Rasd2	RASD family, member 2		IDA	19	14,093,270	14,103,996		UniProtKB
G	Smad7	SMAD family member 7		ISO	18	72,294,803	72,323,354	RGD:1624291	RGD
G	Sox4	SRY (sex determining region Y)-box 4		ISO	17	42,172,863	42,177,590	RGD:1624291	RGD
G	Spopl	speckle-type POZ protein-like		ISO	3	1,518,951	1,579,141	RGD:1624291	RGD
G	Ubxn1	UBX domain protein 1		ISO	1	211,541,002	211,544,682	RGD:1624291	RGD
G	Ubxn1	UBX domain protein 1		ISS	1	211,541,002	211,544,682	RGD:1600115	UniProtKB
G	Ufl1	Ufm1-specific ligase 1		ISO	5	40,307,712	40,340,062	RGD:1624291	RGD
G	Ufl1	Ufm1-specific ligase 1		ISS	5	40,307,712	40,340,062	RGD:1600115	UniProtKB
G	Usp4	ubiquitin specific peptidase 4 (proto-oncogene)		ISO				RGD:1624291	RGD
G	Usp4	ubiquitin specific peptidase 4 (proto-oncogene)		ISS				RGD:1600115	UniProtKB
G	Vps28	vacuolar protein sorting 28 homolog (S. cerevisiae)		ISS	7	114,670,491	114,674,339	RGD:1600115	UniProtKB
G	Vps28	vacuolar protein sorting 28 homolog (S. cerevisiae)		ISO	7	114,670,491	114,674,339	RGD:1624291	RGD
negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Anks1a	ankyrin repeat and sterile alpha motif domain containing 1A		ISO	20	6,121,316	6,274,822	RGD:1624291	RGD
G	Pml	promyelocytic leukemia		ISO	8	62,020,438	62,051,927	RGD:1624291	RGD
G	Psen1	presenilin 1		ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Psen1	presenilin 1		IEA	6	107,737,543	107,776,357	RGD:1600115	ENSEMBL
G	Psen2	presenilin 2		ISO	13	95,934,674	95,951,836	RGD:1624291	RGD
G	Sufu	suppressor of fused homolog (Drosophila)		ISO	1	251,612,377	251,708,109	RGD:1624291	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1		ISO	7	137,557,836	137,561,883	RGD:1624291	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1		IEA	7	137,557,836	137,561,883	RGD:1600115	ENSEMBL
negative regulation of ubiquitin-protein ligase activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bag5	BCL2-associated athanogene 5		IDA	6	136,491,438	136,495,093		BHF-UCL
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISO	5	108,908,749	108,916,380	RGD:1624291	RGD
G	Limk1	LIM domain kinase 1		ISO	12	23,091,809	23,125,717	RGD:1624291	RGD
G	Psen1	presenilin 1		ISO	6	107,737,543	107,776,357	RGD:1624291	RGD
G	Psen1	presenilin 1		IEA	6	107,737,543	107,776,357	RGD:1600115	ENSEMBL
G	Psen2	presenilin 2		ISO	13	95,934,674	95,951,836	RGD:1624291	RGD
G	Smad7	SMAD family member 7		ISO	18	72,294,803	72,323,354	RGD:1624291	RGD
G	Smad7	SMAD family member 7		IEA	18	72,294,803	72,323,354	RGD:1600115	ENSEMBL
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Fbxo5	F-box protein 5		ISO	1	36,492,134	36,498,503	RGD:1624291	RGD
G	Fbxo5	F-box protein 5		ISO	1	36,492,134	36,498,503	RGD:1624291	RGD
positive regulation of protein ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adrb2	adrenoceptor beta 2, surface		ISO	18	58,174,958	58,177,000	RGD:1624291	RGD
G	Adrb2	adrenoceptor beta 2, surface		IEA	18	58,174,958	58,177,000	RGD:1600115	ENSEMBL
G	Aimp2	aminoacyl tRNA synthetase complex-interacting multifunctional protein 2		ISO	12	11,028,968	11,038,458	RGD:1624291	RGD
G	Aimp2	aminoacyl tRNA synthetase complex-interacting multifunctional protein 2		IEA	12	11,028,968	11,038,458	RGD:1600115	ENSEMBL
G	Angpt1	angiopoietin 1		ISO	7	78,195,504	78,451,471	RGD:1624291	RGD
G	Arrb1	arrestin, beta 1		IMP	1	156,871,564	156,937,540	RGD:5509917	RGD
G	Arrb2	arrestin, beta 2		ISO	10	57,244,071	57,284,166	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		IEA	10	57,244,071	57,284,166	RGD:1600115	ENSEMBL
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Bcl10	B-cell CLL/lymphoma 10		ISO	2	244,116,880	244,126,393	RGD:1624291	RGD
G	Bcl10	B-cell CLL/lymphoma 10		ISS	2	244,116,880	244,126,393	RGD:1600115	UniProtKB
G	Brca1	breast cancer 1, early onset		ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Commd1	copper metabolism (Murr1) domain containing 1		IEA	14	103,571,472	103,667,692	RGD:1600115	ENSEMBL
G	Commd1	copper metabolism (Murr1) domain containing 1		ISO	14	103,571,472	103,667,692	RGD:1624291	RGD
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3		ISO	10	10,984,721	11,009,374	RGD:1624291	RGD
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3		IEA	10	10,984,721	11,009,374	RGD:1600115	ENSEMBL
G	Dnajb2	DnaJ (Hsp40) homolog, subfamily B, member 2		ISO	9	74,517,647	74,525,857	RGD:1624291	RGD
G	Dnajb2	DnaJ (Hsp40) homolog, subfamily B, member 2		IEA	9	74,517,647	74,525,857	RGD:1600115	ENSEMBL
G	Fanci	Fanconi anemia, complementation group I		IEA	1	135,144,029	135,196,828	RGD:1600115	ENSEMBL
G	Fanci	Fanconi anemia, complementation group I		ISO	1	135,144,029	135,196,828	RGD:1624291	RGD
G	Fbxo4	F-box protein 4		ISO	2	53,871,746	53,884,722	RGD:1624291	RGD
G	Fgfr3	fibroblast growth factor receptor 3		ISO	14	82,683,191	82,697,229	RGD:1624291	RGD
G	Fgfr3	fibroblast growth factor receptor 3		IEA	14	82,683,191	82,697,229	RGD:1600115	ENSEMBL
G	Fkbp1a	FK506 binding protein 1a		ISO	3	141,861,237	141,880,797	RGD:1624291	RGD
G	Hspa5	heat shock protein 5		ISO	3	13,783,825	13,788,022	RGD:1624291	RGD
G	Hspa5	heat shock protein 5		IEA	3	13,783,825	13,788,022	RGD:1600115	ENSEMBL
G	Hspbp1	HSPA binding protein, cytoplasmic cochaperone 1		ISO	1	67,882,356	67,905,766	RGD:1624291	RGD
G	Hspbp1	HSPA binding protein, cytoplasmic cochaperone 1		IEA	1	67,882,356	67,905,766	RGD:1600115	ENSEMBL
G	Lrrk2	leucine-rich repeat kinase 2		ISO	7	130,105,902	130,267,747	RGD:1624291	RGD
G	Mapk15	mitogen-activated protein kinase 15		IMP	7	114,026,694	114,032,007	RGD:2304230	RGD
G	Ndfip1	Nedd4 family interacting protein 1		ISO	18	31,351,538	31,401,736	RGD:1624291	RGD
G	Ndfip1	Nedd4 family interacting protein 1		IEA	18	31,351,538	31,401,736	RGD:1600115	ENSEMBL
G	Ndfip2	Nedd4 family interacting protein 2		IEA	15	89,316,553	89,376,267	RGD:1600115	ENSEMBL
G	Ndfip2	Nedd4 family interacting protein 2		ISO	15	89,316,553	89,376,267	RGD:1624291	RGD
G	Ndnl2	necdin-like 2		ISO	1	119,276,434	119,278,432	RGD:1624291	RGD
G	Nhlrc1	NHL repeat containing 1		ISO	17	23,726,054	23,727,244	RGD:1624291	RGD
G	Nhlrc1	NHL repeat containing 1		IEA	17	23,726,054	23,727,244	RGD:1600115	ENSEMBL
G	Nod2	nucleotide-binding oligomerization domain containing 2		ISO	19	19,662,337	19,697,341	RGD:1624291	RGD
G	Paxip1	PAX interacting (with transcription-activation domain) protein 1		ISO	4	2,790,532	2,839,246	RGD:1624291	RGD
G	Paxip1	PAX interacting (with transcription-activation domain) protein 1		IEA	4	2,790,532	2,839,246	RGD:1600115	ENSEMBL
G	Peli1	pellino E3 ubiquitin protein ligase 1		ISO	14	101,870,272	101,924,228	RGD:1624291	RGD
G	Peli1	pellino E3 ubiquitin protein ligase 1		IEA	14	101,870,272	101,924,228	RGD:1600115	ENSEMBL
G	Prickle1	prickle homolog 1 (Drosophila)		ISO	7	131,967,220	131,986,187	RGD:1624291	RGD
G	Prickle1	prickle homolog 1 (Drosophila)		IEA	7	131,967,220	131,986,187	RGD:1600115	ENSEMBL
G	Psmd10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10		ISO				RGD:1624291	RGD
G	Psmd10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10		ISS				RGD:1600115	UniProtKB
G	Rassf1	Ras association (RalGDS/AF-6) domain family member 1		ISO	8	112,798,863	112,810,004	RGD:1624291	RGD
G	Rassf1	Ras association (RalGDS/AF-6) domain family member 1		IEA	8	112,798,863	112,810,004	RGD:1600115	ENSEMBL
G	Rassf5	Ras association (RalGDS/AF-6) domain family member 5		ISO	13	44,121,863	44,188,493	RGD:1624291	RGD
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		ISO	14	17,683,377	17,698,982	RGD:1624291	RGD
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		IEA	14	17,683,377	17,698,982	RGD:1600115	ENSEMBL
G	Ripk2	receptor-interacting serine-threonine kinase 2		ISO	5	30,714,817	30,745,941	RGD:1624291	RGD
G	Ripk2	receptor-interacting serine-threonine kinase 2		IEA	5	30,714,817	30,745,941	RGD:1600115	ENSEMBL
G	Rnf111	ring finger protein 111		ISO	8	74,909,360	74,983,363	RGD:1624291	RGD
G	Rnf111	ring finger protein 111		IEA	8	74,909,360	74,983,363	RGD:1600115	ENSEMBL
G	Sept4	septin 4		ISO	10	75,871,422	75,880,878	RGD:1624291	RGD
G	Sept4	septin 4		IEA	10	75,871,422	75,880,878	RGD:1600115	ENSEMBL
G	Smad7	SMAD family member 7		ISO	18	72,294,803	72,323,354	RGD:1624291	RGD
G	Smad7	SMAD family member 7		IEA	18	72,294,803	72,323,354	RGD:1600115	ENSEMBL
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		IEA	12	9,950,304	10,042,391	RGD:1600115	ENSEMBL
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Sphk1	sphingosine kinase 1		ISO	10	106,641,509	106,645,579	RGD:1624291	RGD
G	Sphk1	sphingosine kinase 1		ISS	10	106,641,509	106,645,579	RGD:1600115	UniProtKB
G	Sprtn	SprT-like N-terminal domain		ISS	19	55,069,130	55,073,670	RGD:1600115	UniProtKB
G	Sprtn	SprT-like N-terminal domain		IEA	19	55,069,130	55,073,670	RGD:1600115	ENSEMBL
G	Sprtn	SprT-like N-terminal domain		ISO	19	55,069,130	55,073,670	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		IEA	10	15,096,150	15,098,431	RGD:1600115	ENSEMBL
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Tbc1d7	TBC1 domain family, member 7		IEA	17	27,360,670	27,377,803	RGD:1600115	ENSEMBL
G	Tbc1d7	TBC1 domain family, member 7		ISO	17	27,360,670	27,377,803	RGD:1624291	RGD
G	Tspyl5	TSPY-like 5		IEA	7	69,061,484	69,063,175	RGD:1600115	ENSEMBL
G	Tspyl5	TSPY-like 5		ISO	7	69,061,484	69,063,175	RGD:1624291	RGD
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		ISO	20	18,040,687	18,086,179	RGD:1624291	RGD
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		IEA	20	18,040,687	18,086,179	RGD:1600115	ENSEMBL
G	Wfs1	Wolfram syndrome 1 (wolframin)		ISO	14	79,379,680	79,404,003	RGD:1624291	RGD
positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		IDA	10	15,409,373	15,462,726		BHF-UCL
G	Clu	clusterin		ISO	15	45,365,779	45,405,314	RGD:1624291	RGD
G	Clu	clusterin		IEA	15	45,365,779	45,405,314	RGD:1600115	ENSEMBL
G	Clu	clusterin		ISS	15	45,365,779	45,405,314	RGD:1600115	UniProtKB
G	Disc1	disrupted in schizophrenia 1		ISO	19	55,265,116	55,449,375	RGD:1624291	RGD
G	Disc1	disrupted in schizophrenia 1		IEA	19	55,265,116	55,449,375	RGD:1600115	ENSEMBL
G	Egf	epidermal growth factor		ISO	2	227,103,900	227,195,062	RGD:1624291	RGD
G	Fbxo22	F-box protein 22		ISO	8	58,751,584	58,767,613	RGD:1624291	RGD
G	Fbxo22	F-box protein 22		IEA	8	58,751,584	58,767,613	RGD:1600115	ENSEMBL
G	Fbxw7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase		ISO	2	176,675,226	176,750,737	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog		ISO	1	236,771,027	236,837,261	RGD:1624291	RGD
G	Pten	phosphatase and tensin homolog		IEA	1	236,771,027	236,837,261	RGD:1600115	ENSEMBL
G	Ptk2	protein tyrosine kinase 2		ISO	7	110,933,298	111,084,554	RGD:1624291	RGD
G	Ptk2	protein tyrosine kinase 2		ISS	7	110,933,298	111,084,554	RGD:1600115	UniProtKB
G	Ptk2b	protein tyrosine kinase 2 beta		ISS	15	45,589,222	45,717,866	RGD:1600115	UniProtKB
G	Ptk2b	protein tyrosine kinase 2 beta		ISO	15	45,589,222	45,717,866	RGD:1624291	RGD
G	Sumo3	SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)		ISO	20	11,393,957	11,404,510	RGD:1624291	RGD
G	Sumo3	SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)		IEA	20	11,393,957	11,404,510	RGD:1600115	ENSEMBL
G	Trim67	tripartite motif-containing 67		IEA	19	54,976,864	55,011,687	RGD:1600115	ENSEMBL
G	Trim67	tripartite motif-containing 67		ISO	19	54,976,864	55,011,687	RGD:1624291	RGD
positive regulation of ubiquitin-protein ligase activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		IEA	10	15,409,373	15,462,726	RGD:1600115	ENSEMBL
G	Bmi1	Bmi1 polycomb ring finger oncogene		ISO	17	92,784,216	92,787,947	RGD:1624291	RGD
G	LOC364561	similar to PIN1-like protein		IEA	16	32,656,303	32,658,333	RGD:1600115	ENSEMBL
G	Pin1	peptidylprolyl cis/trans isomerase, NIMA-interacting 1		ISO	8	19,669,537	19,681,741	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISO	1	181,002,811	181,012,741	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISS	1	181,002,811	181,012,741	RGD:1600115	UniProtKB
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		IEA	5	57,663,121	57,676,619	RGD:1600115	ENSEMBL
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		ISO	5	57,663,121	57,676,619	RGD:1624291	RGD
G	Trib3	tribbles homolog 3 (Drosophila)		ISO	3	142,664,641	142,670,135	RGD:1624291	RGD
G	Trib3	tribbles homolog 3 (Drosophila)		IEA	3	142,664,641	142,670,135	RGD:1600115	ENSEMBL
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
protein K11-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Anapc1	anaphase promoting complex subunit 1		IEA	3	116,212,111	116,299,282	RGD:1600115	ENSEMBL
G	Anapc1	anaphase promoting complex subunit 1		ISO	3	116,212,111	116,299,282	RGD:1624291	RGD
G	Anapc10	anaphase promoting complex subunit 10		IEA	19	30,041,566	30,093,688	RGD:1600115	ENSEMBL
G	Anapc10	anaphase promoting complex subunit 10		ISO	19	30,041,566	30,093,688	RGD:1624291	RGD
G	Anapc11	anaphase promoting complex subunit 11		IEA	10	109,988,502	109,999,500	RGD:1600115	ENSEMBL
G	Anapc11	anaphase promoting complex subunit 11		ISO	10	109,988,502	109,999,500	RGD:1624291	RGD
G	Anapc13	anaphase promoting complex subunit 13		IEA	8	107,591,570	107,599,914	RGD:1600115	ENSEMBL
G	Anapc13	anaphase promoting complex subunit 13		ISO	8	107,591,570	107,599,914	RGD:1624291	RGD
G	Anapc2	anaphase promoting complex subunit 2		IEA	3	3,436,569	3,448,278	RGD:1600115	ENSEMBL
G	Anapc2	anaphase promoting complex subunit 2		ISO	3	3,436,569	3,448,278	RGD:1624291	RGD
G	Anapc4	anaphase promoting complex subunit 4		IEA	14	62,879,772	62,911,465	RGD:1600115	ENSEMBL
G	Anapc4	anaphase promoting complex subunit 4		ISO	14	62,879,772	62,911,465	RGD:1624291	RGD
G	Anapc5	anaphase-promoting complex subunit 5		ISS	12	34,850,485	34,884,726	RGD:1600115	UniProtKB
G	Anapc5	anaphase-promoting complex subunit 5		ISO	12	34,850,485	34,884,726	RGD:1624291	RGD
G	Anapc7	anaphase promoting complex subunit 7		ISO	12	35,327,644	35,354,839	RGD:1624291	RGD
G	Cdc16	cell division cycle 16		ISO	16	80,628,131	80,650,925	RGD:1624291	RGD
G	Cdc16	cell division cycle 16		IEA	16	80,628,131	80,650,925	RGD:1600115	ENSEMBL
G	Cdc23	cell division cycle 23		IEA	18	27,108,516	27,128,285	RGD:1600115	ENSEMBL
G	Cdc23	cell division cycle 23		ISO	18	27,108,516	27,128,285	RGD:1624291	RGD
G	Cdc26	cell division cycle 26		ISO	5	79,390,026	79,403,683	RGD:1624291	RGD
G	Cdc26	cell division cycle 26		ISS	5	79,390,026	79,403,683	RGD:1600115	UniProtKB
G	Cdc27	cell division cycle 27		ISO	10	93,678,790	93,725,987	RGD:1624291	RGD
G	Cdc27	cell division cycle 27		ISS	10	93,678,790	93,725,987	RGD:1600115	UniProtKB
G	Rnf4	ring finger protein 4		IDA	14	82,092,024	82,112,036		UniProtKB
G	Ube2a	ubiquitin-conjugating enzyme E2A		ISO	X	7,981,683	7,992,372	RGD:1624291	RGD
G	Ube2a	ubiquitin-conjugating enzyme E2A		IEA	X	7,981,683	7,992,372	RGD:1600115	ENSEMBL
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISS	10	37,509,322	37,523,900	RGD:1600115	UniProtKB
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		IEA	3	155,800,357	155,802,757	RGD:1600115	ENSEMBL
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISS	2	232,943,214	232,971,022	RGD:1600115	UniProtKB
G	Ube2d4	ubiquitin-conjugating enzyme E2D 4 (putative)		ISO	14	2,469,772	2,471,246	RGD:1624291	RGD
G	Ube2e2	ubiquitin-conjugating enzyme E2E 2		ISO	15	8,554,863	8,828,088	RGD:1624291	RGD
G	Ube2e3	ubiquitin-conjugating enzyme E2E 3		ISO	3	61,554,632	61,610,921	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
protein K27-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rnf6	ring finger protein (C3H2C3 type) 6		IEA	12	9,193,659	9,203,700	RGD:1600115	ENSEMBL
G	Rnf6	ring finger protein (C3H2C3 type) 6		ISO	12	9,193,659	9,203,700	RGD:1624291	RGD
G	Ube2d4	ubiquitin-conjugating enzyme E2D 4 (putative)		ISO	14	2,469,772	2,471,246	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
protein K29-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		IEA	3	145,644,315	145,707,190	RGD:1600115	ENSEMBL
G	Ube2d4	ubiquitin-conjugating enzyme E2D 4 (putative)		ISO	14	2,469,772	2,471,246	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
protein K48-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arih2	ariadne homolog 2 (Drosophila)		ISO	8	113,647,000	113,705,922	RGD:1624291	RGD
G	Arih2	ariadne homolog 2 (Drosophila)		ISO	8	113,647,000	113,705,922	RGD:1624291	RGD
G	Arih2	ariadne homolog 2 (Drosophila)		IEA	8	113,647,000	113,705,922	RGD:1600115	ENSEMBL
G	Cdc34	cell division cycle 34		ISO	7	11,534,543	11,539,941	RGD:1624291	RGD
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		ISS	20	49,856,040	49,973,091	RGD:1600115	UniProtKB
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		ISO	20	49,856,040	49,973,091	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		IEA	3	145,644,315	145,707,190	RGD:1600115	ENSEMBL
G	LOC100366017	ubiquitin-conjugating enzyme E2E 1-like		IEA				RGD:1600115	ENSEMBL
G	March6	membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase		ISO	2	83,544,604	83,622,254	RGD:1624291	RGD
G	March6	membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase		IEA	2	83,544,604	83,622,254	RGD:1600115	ENSEMBL
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISS	1	43,151,265	44,374,470	RGD:1600115	UniProtKB
G	Peli1	pellino E3 ubiquitin protein ligase 1		ISO	14	101,870,272	101,924,228	RGD:1624291	RGD
G	Peli1	pellino E3 ubiquitin protein ligase 1		IEA	14	101,870,272	101,924,228	RGD:1600115	ENSEMBL
G	Rnf146	ring finger protein 146		ISO	1	29,255,138	29,265,731	RGD:1624291	RGD
G	Rnf146	ring finger protein 146		ISS	1	29,255,138	29,265,731	RGD:1600115	UniProtKB
G	Rnf152	ring finger protein 152		ISS	13	11,309,564	11,386,370	RGD:1600115	UniProtKB
G	Rnf152	ring finger protein 152		ISO	13	11,309,564	11,386,370	RGD:1624291	RGD
G	Rnf187	ring finger protein 187		ISS	10	45,221,784	45,227,683	RGD:1600115	UniProtKB
G	Rnf187	ring finger protein 187		ISO	10	45,221,784	45,227,683	RGD:1624291	RGD
G	Rnf216	ring finger protein 216		ISO	12	11,850,549	11,968,127	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		IDA	14	82,092,024	82,112,036		UniProtKB
G	Rnf5	ring finger protein 5, E3 ubiquitin protein ligase		ISO	20	4,248,002	4,250,448	RGD:1624291	RGD
G	Rnf5	ring finger protein 5, E3 ubiquitin protein ligase		IEA	20	4,248,002	4,250,448	RGD:1600115	ENSEMBL
G	Rnf6	ring finger protein (C3H2C3 type) 6		ISO	12	9,193,659	9,203,700	RGD:1624291	RGD
G	Rnf6	ring finger protein (C3H2C3 type) 6		IEA	12	9,193,659	9,203,700	RGD:1600115	ENSEMBL
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		IEA	5	57,663,121	57,676,619	RGD:1600115	ENSEMBL
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		ISO	5	57,663,121	57,676,619	RGD:1624291	RGD
G	Ttc3	tetratricopeptide repeat domain 3		ISO	11	34,617,072	34,659,043	RGD:1624291	RGD
G	Ube2a	ubiquitin-conjugating enzyme E2A		ISO	X	7,981,683	7,992,372	RGD:1624291	RGD
G	Ube2a	ubiquitin-conjugating enzyme E2A		IEA	X	7,981,683	7,992,372	RGD:1600115	ENSEMBL
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISS	10	37,509,322	37,523,900	RGD:1600115	UniProtKB
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		IEA	3	155,800,357	155,802,757	RGD:1600115	ENSEMBL
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		ISO	20	18,040,687	18,086,179	RGD:1624291	RGD
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		ISS	20	18,040,687	18,086,179	RGD:1600115	UniProtKB
G	Ube2d2	ubiquitin-conjugating enzyme E2D 2		ISO	18	28,426,503	28,434,785	RGD:1624291	RGD
G	Ube2d2	ubiquitin-conjugating enzyme E2D 2		ISS	18	28,426,503	28,434,785	RGD:1600115	UniProtKB
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISS	2	232,943,214	232,971,022	RGD:1600115	UniProtKB
G	Ube2d4	ubiquitin-conjugating enzyme E2D 4 (putative)		ISO	14	2,469,772	2,471,246	RGD:1624291	RGD
G	Ube2e2	ubiquitin-conjugating enzyme E2E 2		ISO	15	8,554,863	8,828,088	RGD:1624291	RGD
G	Ube2e3	ubiquitin-conjugating enzyme E2E 3		ISO	3	61,554,632	61,610,921	RGD:1624291	RGD
G	Ube2g1	ubiquitin-conjugating enzyme E2G 1		ISO	10	59,495,501	59,576,926	RGD:1624291	RGD
G	Ube2g1	ubiquitin-conjugating enzyme E2G 1		ISS	10	59,495,501	59,576,926	RGD:1600115	UniProtKB
G	Ube2g2	ubiquitin-conjugating enzyme E2G 2		ISO	20	11,367,545	11,389,283	RGD:1624291	RGD
G	Ube2g2	ubiquitin-conjugating enzyme E2G 2		IEA	20	11,367,545	11,389,283	RGD:1600115	ENSEMBL
G	Ube2k	ubiquitin-conjugating enzyme E2K		ISO	14	45,349,287	45,411,823	RGD:1624291	RGD
G	Ube2k	ubiquitin-conjugating enzyme E2K		IEA	14	45,349,287	45,411,823	RGD:1600115	ENSEMBL
G	Ube2q2	ubiquitin-conjugating enzyme E2Q family member 2		ISO	8	58,688,257	58,749,088	RGD:1624291	RGD
G	Ube2q2l	ubiquitin-conjugating enzyme E2Q family member 2-like		IEA	X	21,893,651	21,895,196	RGD:1600115	ENSEMBL
G	Ube2r2	ubiquitin-conjugating enzyme E2R 2		IEA	5	58,547,551	58,607,325	RGD:1600115	ENSEMBL
G	Ube2r2	ubiquitin-conjugating enzyme E2R 2		ISO	5	58,547,551	58,607,325	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
G	Ube3a	ubiquitin protein ligase E3A		ISO	1	110,729,142	110,816,491	RGD:1624291	RGD
G	Znrf1	zinc and ring finger 1, E3 ubiquitin protein ligase		ISO	19	41,455,386	41,537,955	RGD:1624291	RGD
G	Znrf1	zinc and ring finger 1, E3 ubiquitin protein ligase		IEA	19	41,455,386	41,537,955	RGD:1600115	ENSEMBL
protein K6-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bard1	BRCA1 associated RING domain 1		IEA	9	70,120,151	70,198,591	RGD:1600115	ENSEMBL
G	Bard1	BRCA1 associated RING domain 1		ISO	9	70,120,151	70,198,591	RGD:1624291	RGD
G	Bard1	BRCA1 associated RING domain 1		ISO	9	70,120,151	70,198,591	RGD:1624291	RGD
G	Bard1	BRCA1 associated RING domain 1		ISS	9	70,120,151	70,198,591	RGD:1600115	UniProtKB
G	Brca1	breast cancer 1, early onset		ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset		ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset		ISS	10	90,513,630	90,572,676	RGD:1600115	UniProtKB
G	Rnf4	ring finger protein 4		IDA	14	82,092,024	82,112,036		UniProtKB
G	Rnf6	ring finger protein (C3H2C3 type) 6		IEA	12	9,193,659	9,203,700	RGD:1600115	ENSEMBL
G	Rnf6	ring finger protein (C3H2C3 type) 6		ISO	12	9,193,659	9,203,700	RGD:1624291	RGD
G	Ube2d4	ubiquitin-conjugating enzyme E2D 4 (putative)		ISO	14	2,469,772	2,471,246	RGD:1624291	RGD
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
protein K63-linked ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arih2	ariadne homolog 2 (Drosophila)		ISO	8	113,647,000	113,705,922	RGD:1624291	RGD
G	Arih2	ariadne homolog 2 (Drosophila)		IEA	8	113,647,000	113,705,922	RGD:1600115	ENSEMBL
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISO	5	108,908,749	108,916,380	RGD:1624291	RGD
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISS	5	108,908,749	108,916,380	RGD:1600115	UniProtKB
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		IEA	3	145,644,315	145,707,190	RGD:1600115	ENSEMBL
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		IDA	8	77,252,500	77,337,402		UniProtKB
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISS	11	70,304,917	70,328,010	RGD:1600115	UniProtKB
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		IDA	14	82,092,024	82,112,036		UniProtKB
G	Rnf5	ring finger protein 5, E3 ubiquitin protein ligase		ISO	20	4,248,002	4,250,448	RGD:1624291	RGD
G	Rnf5	ring finger protein 5, E3 ubiquitin protein ligase		IEA	20	4,248,002	4,250,448	RGD:1600115	ENSEMBL
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISO	20	7,929,802	7,954,697	RGD:1624291	RGD
G	Rnf8	ring finger protein 8, E3 ubiquitin protein ligase		ISS	20	7,929,802	7,954,697	RGD:1600115	UniProtKB
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		IEA	10	15,096,150	15,098,431	RGD:1600115	ENSEMBL
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Traf2	Tnf receptor-associated factor 2		ISO	3	3,692,740	3,717,332	RGD:1624291	RGD
G	Traf2	Tnf receptor-associated factor 2		ISO	3	3,692,740	3,717,332	RGD:1624291	RGD
G	Traf2	Tnf receptor-associated factor 2		IEA	3	3,692,740	3,717,332	RGD:1600115	ENSEMBL
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISS	3	86,827,582	86,847,408	RGD:1600115	UniProtKB
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Trim5	tripartite motif-containing 5		ISO	1	162,096,439	162,113,409	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISS	10	37,509,322	37,523,900	RGD:1600115	UniProtKB
G	Ube2d4	ubiquitin-conjugating enzyme E2D 4 (putative)		ISO	14	2,469,772	2,471,246	RGD:1624291	RGD
G	Ube2e2	ubiquitin-conjugating enzyme E2E 2		ISO	15	8,554,863	8,828,088	RGD:1624291	RGD
G	Ube2e3	ubiquitin-conjugating enzyme E2E 3		ISO	3	61,554,632	61,610,921	RGD:1624291	RGD
G	Ube2g1	ubiquitin-conjugating enzyme E2G 1		ISO	10	59,495,501	59,576,926	RGD:1624291	RGD
G	Ube2g1	ubiquitin-conjugating enzyme E2G 1		ISS	10	59,495,501	59,576,926	RGD:1600115	UniProtKB
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISS	7	32,719,959	32,750,002	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISS	1	67,745,354	67,749,414	RGD:1600115	UniProtKB
G	Ube2s	ubiquitin-conjugating enzyme E2S		ISO	1	67,745,354	67,749,414	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
G	Ube2v1	ubiquitin-conjugating enzyme E2 variant 1		ISO	3	158,745,873	158,768,725	RGD:1624291	RGD
G	Ube2v1	ubiquitin-conjugating enzyme E2 variant 1		ISO	3	158,745,873	158,768,725	RGD:1624291	RGD
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Zfp91	zinc finger protein 91		ISO	1	215,846,158	215,882,704	RGD:1624291	RGD
protein linear polyubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISO	3	142,644,156	142,660,799	RGD:1624291	RGD
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISO	3	142,644,156	142,660,799	RGD:1624291	RGD
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISO	3	142,644,156	142,660,799	RGD:1624291	RGD
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISS	3	142,644,156	142,660,799	RGD:1600115	UniProtKB
G	Rnf31	ring finger protein 31		ISO	15	33,727,541	33,739,204	RGD:1624291	RGD
G	Rnf31	ring finger protein 31		ISO	15	33,727,541	33,739,204	RGD:1624291	RGD
G	Rnf31	ring finger protein 31		ISO	15	33,727,541	33,739,204	RGD:1624291	RGD
G	Sharpin	SHANK-associated RH domain interactor		ISO	7	114,397,762	114,401,974	RGD:1624291	RGD
G	Sharpin	SHANK-associated RH domain interactor		ISO	7	114,397,762	114,401,974	RGD:1624291	RGD
G	Sharpin	SHANK-associated RH domain interactor		ISO	7	114,397,762	114,401,974	RGD:1624291	RGD
G	Sharpin	SHANK-associated RH domain interactor		ISS	7	114,397,762	114,401,974	RGD:1600115	UniProtKB
protein monoubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cul1	cullin 1		ISO	4	75,636,914	75,705,724	RGD:1624291	RGD
G	Cul1	cullin 1		IEA	4	75,636,914	75,705,724	RGD:1600115	ENSEMBL
G	Cul3	cullin 3		ISS	9	79,574,062	79,634,396	RGD:1600115	UniProtKB
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Dtl	denticleless E3 ubiquitin protein ligase homolog (Drosophila)		IEA	13	107,603,353	107,640,812	RGD:1600115	ENSEMBL
G	Dtl	denticleless E3 ubiquitin protein ligase homolog (Drosophila)		ISO	13	107,603,353	107,640,812	RGD:1624291	RGD
G	Fancl	Fanconi anemia, complementation group L		IEA	14	107,211,448	107,276,828	RGD:1600115	ENSEMBL
G	Fancl	Fanconi anemia, complementation group L		ISO	14	107,211,448	107,276,828	RGD:1624291	RGD
G	Fbxl2	F-box and leucine-rich repeat protein 2		ISO	8	118,621,502	118,669,052	RGD:1624291	RGD
G	Fbxl2	F-box and leucine-rich repeat protein 2		IEA	8	118,621,502	118,669,052	RGD:1600115	ENSEMBL
G	Klhl12	kelch-like family member 12		ISO	13	47,403,579	47,433,301	RGD:1624291	RGD
G	Klhl12	kelch-like family member 12		ISS	13	47,403,579	47,433,301	RGD:1600115	UniProtKB
G	Klhl22	kelch-like family member 22		ISS	11	85,179,262	85,220,103	RGD:1600115	UniProtKB
G	Klhl22	kelch-like family member 22		ISO	11	85,179,262	85,220,103	RGD:1624291	RGD
G	LOC501546	hypothetical protein LOC501546		ISS	X	41,269,837	41,397,687	RGD:1600115	UniProtKB
G	LOC682704	similar to CG7220-PA, isoform A		ISS				RGD:1600115	UniProtKB
G	Mgrn1	mahogunin ring finger 1, E3 ubiquitin protein ligase		ISO	10	10,756,804	10,805,883	RGD:1624291	RGD
G	Mgrn1	mahogunin ring finger 1, E3 ubiquitin protein ligase		IEA	10	10,756,804	10,805,883	RGD:1600115	ENSEMBL
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4l	neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase		IMP	18	61,134,242	61,477,040	RGD:6893329	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISS	1	43,151,265	44,374,470	RGD:1600115	UniProtKB
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		IEA	7	119,794,976	119,805,104	RGD:1600115	ENSEMBL
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		IEA	5	57,663,121	57,676,619	RGD:1600115	ENSEMBL
G	Topors	topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase		ISO	5	57,663,121	57,676,619	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		ISO	1	160,175,882	160,187,661	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		ISO	1	160,175,882	160,187,661	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		IEA	1	160,175,882	160,187,661	RGD:1600115	ENSEMBL
G	Tsg101	tumor susceptibility gene 101		IDA	1	97,445,040	97,475,141	RGD:1300501	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		IEA	10	37,509,322	37,523,900	RGD:1600115	ENSEMBL
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2r2	ubiquitin-conjugating enzyme E2R 2		IEA	5	58,547,551	58,607,325	RGD:1600115	ENSEMBL
G	Ube2r2	ubiquitin-conjugating enzyme E2R 2		ISO	5	58,547,551	58,607,325	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		ISO	13	47,924,340	47,934,842	RGD:1624291	RGD
G	Ube2t	ubiquitin-conjugating enzyme E2T (putative)		IEA	13	47,924,340	47,934,842	RGD:1600115	ENSEMBL
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
G	Ube2w	ubiquitin-conjugating enzyme E2W		ISO				RGD:1624291	RGD
protein polyubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Amfr	autocrine motility factor receptor, E3 ubiquitin protein ligase		ISO	19	11,434,553	11,467,592	RGD:1624291	RGD
G	Amfr	autocrine motility factor receptor, E3 ubiquitin protein ligase		ISO	19	11,434,553	11,467,592	RGD:1624291	RGD
G	Arih2	ariadne homolog 2 (Drosophila)		ISO	8	113,647,000	113,705,922	RGD:1624291	RGD
G	Arih2	ariadne homolog 2 (Drosophila)		ISO	8	113,647,000	113,705,922	RGD:1624291	RGD
G	Asb2	ankyrin repeat and SOCS box-containing 2		ISO	6	127,609,500	127,645,492	RGD:1624291	RGD
G	Axin1	axin 1		ISO	10	15,409,373	15,462,726	RGD:1624291	RGD
G	Axin1	axin 1		IEA	10	15,409,373	15,462,726	RGD:1600115	ENSEMBL
G	Bcl2	B-cell CLL/lymphoma 2		ISO	13	12,730,736	12,905,108	RGD:1624291	RGD
G	Bcl2	B-cell CLL/lymphoma 2		IEA	13	12,730,736	12,905,108	RGD:1600115	ENSEMBL
G	Birc2	baculoviral IAP repeat-containing 2		ISO	8	4,649,559	4,667,733	RGD:1624291	RGD
G	Birc2	baculoviral IAP repeat-containing 2		IEA	8	4,649,559	4,667,733	RGD:1600115	ENSEMBL
G	Btrc	beta-transducin repeat containing E3 ubiquitin protein ligase		ISO	1	250,528,730	250,693,952	RGD:1624291	RGD
G	Btrc	beta-transducin repeat containing E3 ubiquitin protein ligase		IEA	1	250,528,730	250,693,952	RGD:1600115	ENSEMBL
G	Cdc34	cell division cycle 34		ISO	7	11,534,543	11,539,941	RGD:1624291	RGD
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISO	5	108,908,749	108,916,380	RGD:1624291	RGD
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISS	5	108,908,749	108,916,380	RGD:1600115	UniProtKB
G	Chfr	checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase		ISO	12	46,651,265	46,684,689	RGD:1624291	RGD
G	Chfr	checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase		ISO	12	46,651,265	46,684,689	RGD:1624291	RGD
G	Chfr	checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase		ISS	12	46,651,265	46,684,689	RGD:1600115	UniProtKB
G	Cul3	cullin 3		ISS	9	79,574,062	79,634,396	RGD:1600115	UniProtKB
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul5	cullin 5		TAS	8	57,080,787	57,132,486	RGD:1299331	RGD
G	Ddb2	damage specific DNA binding protein 2		IEA	3	75,568,487	75,591,428	RGD:1600115	ENSEMBL
G	Ddb2	damage specific DNA binding protein 2		ISO	3	75,568,487	75,591,428	RGD:1624291	RGD
G	Dtl	denticleless E3 ubiquitin protein ligase homolog (Drosophila)		ISO	13	107,603,353	107,640,812	RGD:1624291	RGD
G	Dzip3	DAZ interacting protein 3, zinc finger		ISO	11	53,065,385	53,134,110	RGD:1624291	RGD
G	Ercc8	excision repair cross-complementing rodent repair deficiency, complementation group 8		IEA	2	39,382,976	39,420,764	RGD:1600115	ENSEMBL
G	Fbxo22	F-box protein 22		ISO	8	58,751,584	58,767,613	RGD:1624291	RGD
G	Fbxo22	F-box protein 22		IEA	8	58,751,584	58,767,613	RGD:1600115	ENSEMBL
G	Fbxo4	F-box protein 4		ISO	2	53,871,746	53,884,722	RGD:1624291	RGD
G	Fbxo4	F-box protein 4		ISO	2	53,871,746	53,884,722	RGD:1624291	RGD
G	Fbxw11	F-box and WD repeat domain containing 11		ISO	10	17,502,480	17,600,199	RGD:1624291	RGD
G	Fbxw11	F-box and WD repeat domain containing 11		IEA	10	17,502,480	17,600,199	RGD:1600115	ENSEMBL
G	Fbxw11	F-box and WD repeat domain containing 11		IEA	10	17,502,480	17,600,199	RGD:1600115	ENSEMBL
G	Fbxw11	F-box and WD repeat domain containing 11		ISO	10	17,502,480	17,600,199	RGD:1624291	RGD
G	G2e3	G2/M-phase specific E3 ubiquitin protein ligase		ISO	6	71,421,049	71,451,405	RGD:1624291	RGD
G	G2e3	G2/M-phase specific E3 ubiquitin protein ligase		IEA	6	71,421,049	71,451,405	RGD:1600115	ENSEMBL
G	Hdac6	histone deacetylase 6		ISO	X	26,585,852	26,606,999	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Klhl42	kelch-like family, member 42		ISO	4	184,688,926	184,709,859	RGD:1624291	RGD
G	LOC100361537	peptidylprolyl isomerase (cyclophilin)-like 2-like		IEA	6	104,134,690	104,136,255	RGD:1600115	ENSEMBL
G	LOC501546	hypothetical protein LOC501546		ISS	X	41,269,837	41,397,687	RGD:1600115	UniProtKB
G	Lrsam1	leucine rich repeat and sterile alpha motif containing 1		ISO	3	11,911,191	11,951,806	RGD:1624291	RGD
G	Map3k1	mitogen activated protein kinase kinase kinase 1		IMP	2	43,062,252	43,126,058	RGD:729224	RGD
G	March1	membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase		ISO	16	24,971,361	25,496,590	RGD:1624291	RGD
G	March1	membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase		IEA	16	24,971,361	25,496,590	RGD:1600115	ENSEMBL
G	March1	membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase		ISO	16	24,971,361	25,496,590	RGD:1624291	RGD
G	March5	membrane-associated ring finger (C3HC4) 5		IEA	1	241,475,394	241,495,500	RGD:1600115	ENSEMBL
G	March5	membrane-associated ring finger (C3HC4) 5		ISO	1	241,475,394	241,495,500	RGD:1624291	RGD
G	March8	membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase		IEA	4	152,494,801	152,609,538	RGD:1600115	ENSEMBL
G	March8	membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase		ISO	4	152,494,801	152,609,538	RGD:1624291	RGD
G	Mgrn1	mahogunin ring finger 1, E3 ubiquitin protein ligase		ISO	10	10,756,804	10,805,883	RGD:1624291	RGD
G	Mgrn1	mahogunin ring finger 1, E3 ubiquitin protein ligase		IEA	10	10,756,804	10,805,883	RGD:1600115	ENSEMBL
G	Nhlrc1	NHL repeat containing 1		ISO	17	23,726,054	23,727,244	RGD:1624291	RGD
G	Nhlrc1	NHL repeat containing 1		ISS	17	23,726,054	23,727,244	RGD:1600115	UniProtKB
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Peli1	pellino E3 ubiquitin protein ligase 1		ISO	14	101,870,272	101,924,228	RGD:1624291	RGD
G	Ppil2	peptidylprolyl isomerase (cyclophilin)-like 2		ISO	11	85,903,199	85,925,790	RGD:1624291	RGD
G	Ppil2	peptidylprolyl isomerase (cyclophilin)-like 2		IEA	11	85,903,199	85,925,790	RGD:1600115	ENSEMBL
G	Prpf19	PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)		ISO	1	213,390,564	213,401,943	RGD:1624291	RGD
G	Prpf19	PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)		IEA	1	213,390,564	213,401,943	RGD:1600115	ENSEMBL
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISO	3	142,644,156	142,660,799	RGD:1624291	RGD
G	Rbck1	RanBP-type and C3HC4-type zinc finger containing 1		ISO	3	142,644,156	142,660,799	RGD:1624291	RGD
G	Rnf111	ring finger protein 111		ISO	8	74,909,360	74,983,363	RGD:1624291	RGD
G	Rnf111	ring finger protein 111		IEA	8	74,909,360	74,983,363	RGD:1600115	ENSEMBL
G	Rnf167	ring finger protein 167		ISO	10	57,527,033	57,531,325	RGD:1624291	RGD
G	Rnf167	ring finger protein 167		IEA	10	57,527,033	57,531,325	RGD:1600115	ENSEMBL
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		IEA	5	66,371,470	66,397,538	RGD:1600115	ENSEMBL
G	Rnf20	ring finger protein 20, E3 ubiquitin protein ligase		ISO	5	66,371,470	66,397,538	RGD:1624291	RGD
G	Rnf31	ring finger protein 31		ISO	15	33,727,541	33,739,204	RGD:1624291	RGD
G	Rnf31	ring finger protein 31		ISO	15	33,727,541	33,739,204	RGD:1624291	RGD
G	Rnf41	ring finger protein 41		ISO	7	1,704,204	1,725,892	RGD:1624291	RGD
G	Rnf41	ring finger protein 41		IEA	7	1,704,204	1,725,892	RGD:1600115	ENSEMBL
G	Rnf41	ring finger protein 41		ISO	7	1,704,204	1,725,892	RGD:1624291	RGD
G	Rnf41	ring finger protein 41		ISO	7	1,704,204	1,725,892	RGD:1624291	RGD
G	Skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase		ISO	2	58,769,164	58,797,229	RGD:1624291	RGD
G	Skp2	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase		IEA	2	58,769,164	58,797,229	RGD:1600115	ENSEMBL
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		IEA	12	9,950,304	10,042,391	RGD:1600115	ENSEMBL
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Stub1	STIP1 homology and U-box containing protein 1, E3 ubiquitin protein ligase		ISO	10	15,096,150	15,098,431	RGD:1624291	RGD
G	Tnks	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase		IEA	16	60,953,917	61,095,523	RGD:1600115	ENSEMBL
G	Tnks2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2		ISO	1	241,112,141	241,164,804	RGD:1624291	RGD
G	Tnks2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2		ISO	1	241,112,141	241,164,804	RGD:1624291	RGD
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		ISO	1	160,175,882	160,187,661	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		IEA	1	160,175,882	160,187,661	RGD:1600115	ENSEMBL
G	Trim32	tripartite motif-containing 32		ISO	5	82,380,439	82,391,290	RGD:1624291	RGD
G	Trim32	tripartite motif-containing 32		IEA	5	82,380,439	82,391,290	RGD:1600115	ENSEMBL
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		ISO	20	18,040,687	18,086,179	RGD:1624291	RGD
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		ISO	20	18,040,687	18,086,179	RGD:1624291	RGD
G	Ube2d1	ubiquitin-conjugating enzyme E2D 1		ISO	20	18,040,687	18,086,179	RGD:1624291	RGD
G	Ube2d2	ubiquitin-conjugating enzyme E2D 2		ISO	18	28,426,503	28,434,785	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISS	2	232,943,214	232,971,022	RGD:1600115	UniProtKB
G	Ube3c	ubiquitin protein ligase E3C		ISO	4	889,640	991,900	RGD:1624291	RGD
G	Ube4a	ubiquitination factor E4A		ISO	8	47,879,266	47,918,955	RGD:1624291	RGD
G	Ube4a	ubiquitination factor E4A		IEA	8	47,879,266	47,918,955	RGD:1600115	ENSEMBL
G	Ube4b	ubiquitination factor E4B		ISO	5	166,406,498	166,508,716	RGD:1624291	RGD
G	Ube4b	ubiquitination factor E4B		ISO	5	166,406,498	166,508,716	RGD:1624291	RGD
G	Ubox5	U-box domain containing 5		ISO	3	118,217,774	118,260,594	RGD:1624291	RGD
G	Ubox5	U-box domain containing 5		IEA	3	118,217,774	118,260,594	RGD:1600115	ENSEMBL
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5		ISO	7	73,467,676	73,545,246	RGD:1624291	RGD
G	Zswim2	zinc finger, SWIM-type containing 2		ISO	3	67,101,242	67,121,620	RGD:1624291	RGD
G	Zswim2	zinc finger, SWIM-type containing 2		IEA	3	67,101,242	67,121,620	RGD:1600115	ENSEMBL
protein ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		ISO	6	137,640,482	137,657,552	RGD:1624291	RGD
G	Akt1	v-akt murine thymoma viral oncogene homolog 1		IEA	6	137,640,482	137,657,552	RGD:1600115	ENSEMBL
G	Anapc11	anaphase promoting complex subunit 11		ISO	10	109,988,502	109,999,500	RGD:1624291	RGD
G	Anapc16	anaphase promoting complex subunit 16		ISO	20	27,287,617	27,301,901	RGD:1624291	RGD
G	Arih1	ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)		ISO	8	63,201,871	63,305,302	RGD:1624291	RGD
G	Arih1	ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)		ISO	8	63,201,871	63,305,302	RGD:1624291	RGD
G	Arih1	ariadne homolog, ubiquitin-conjugating enzyme E2 binding protein, 1 (Drosophila)		ISO	8	63,201,871	63,305,302	RGD:1624291	RGD
G	Arrb1	arrestin, beta 1		ISO	1	156,871,564	156,937,540	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		ISO	10	57,244,071	57,284,166	RGD:1624291	RGD
G	Arrb2	arrestin, beta 2		IEA	10	57,244,071	57,284,166	RGD:1600115	ENSEMBL
G	Asb1	ankyrin repeat and SOCS box-containing 1		IEA	9	90,758,693	90,774,541	RGD:1600115	UniPathway
G	Asb10	ankyrin repeat and SOCS box-containing 10		IEA	4	6,010,913	6,019,444	RGD:1600115	UniPathway
G	Asb11	ankyrin repeat and SOCS box-containing 11		IEA	X	50,771,241	50,793,101	RGD:1600115	UniPathway
G	Asb12	ankyrin repeat and SOCS box-containing 12		IEA	X	83,013,812	83,102,298	RGD:1600115	UniPathway
G	Asb13	ankyrin repeat and SOCS box-containing 13		IEA	17	77,759,058	77,777,760	RGD:1600115	UniPathway
G	Asb14	ankyrin repeat and SOCS box-containing 14		IEA	16	2,162,243	2,175,971	RGD:1600115	UniPathway
G	Asb16	ankyrin repeat and SOCS box-containing 16		IEA	10	91,351,087	91,359,176	RGD:1600115	UniPathway
G	Asb17	ankyrin repeat and SOCS box-containing 17		IEA				RGD:1600115	UniPathway
G	Asb18	ankyrin repeat and SOCS box-containing 18		IEA	9	89,056,520	89,122,413	RGD:1600115	UniPathway
G	Asb2	ankyrin repeat and SOCS box-containing 2		IEA	6	127,609,500	127,645,492	RGD:1600115	UniPathway
G	Asb5	ankyrin repeat and SOCS box-containing 5		IEA				RGD:1600115	UniPathway
G	Asb6	ankyrin repeat and SOCS box-containing 6		IEA	3	9,877,183	9,881,794	RGD:1600115	UniPathway
G	Asb7	ankyrin repeat and SOCS box-containing 7		IEA	1	121,091,586	121,142,773	RGD:1600115	UniPathway
G	Asb8	ankyrin repeat and SOCS box-containing 8		IEA	7	136,848,245	136,855,784	RGD:1600115	UniPathway
G	Asb9	ankyrin repeat and SOCS box-containing 9		ISO	X	50,712,265	50,748,863	RGD:1624291	RGD
G	Asb9	ankyrin repeat and SOCS box-containing 9		IEA	X	50,712,265	50,748,863	RGD:1600115	UniPathway
G	Atg3	autophagy related 3		ISO	11	57,162,205	57,190,568	RGD:1624291	RGD
G	Atg3	autophagy related 3		IEA	11	57,162,205	57,190,568	RGD:1600115	ENSEMBL
G	Birc6	baculoviral IAP repeat-containing 6		ISO	6	20,655,186	20,848,961	RGD:1624291	RGD
G	Birc7	baculoviral IAP repeat-containing 7		ISO	3	170,037,778	170,043,277	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset		ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Btrc	beta-transducin repeat containing E3 ubiquitin protein ligase		ISO	1	250,528,730	250,693,952	RGD:1624291	RGD
G	Cand1	cullin-associated and neddylation-dissociated 1		ISO	7	58,461,205	58,499,092	RGD:1624291	RGD
G	Cand1	cullin-associated and neddylation-dissociated 1		ISO	7	58,461,205	58,499,092	RGD:1624291	RGD
G	Cand1	cullin-associated and neddylation-dissociated 1		ISO	7	58,461,205	58,499,092	RGD:1624291	RGD
G	Cand1	cullin-associated and neddylation-dissociated 1		ISS	7	58,461,205	58,499,092	RGD:1600115	UniProtKB
G	Cbll1	Cbl proto-oncogene, E3 ubiquitin protein ligase-like 1		ISO	6	49,352,961	49,366,947	RGD:1624291	RGD
G	Ccnf	cyclin F		ISO	10	13,474,659	13,500,979	RGD:1624291	RGD
G	Ccnf	cyclin F		ISS	10	13,474,659	13,500,979	RGD:1600115	UniProtKB
G	Cdc20	cell division cycle 20		IEA	5	138,913,180	138,916,744	RGD:1600115	UniPathway
G	Cdc34	cell division cycle 34		ISO	7	11,534,543	11,539,941	RGD:1624291	RGD
G	Cdca3	cell division cycle associated 3		IEA	4	160,952,986	160,956,574	RGD:1600115	UniPathway
G	Chfr	checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase		ISO	12	46,651,265	46,684,689	RGD:1624291	RGD
G	Cish	cytokine inducible SH2-containing protein		IEA	8	112,541,034	112,545,982	RGD:1600115	UniPathway
G	Crbn	cereblon		ISO	4	142,135,935	142,154,730	RGD:1624291	RGD
G	Crbn	cereblon		IEA	4	142,135,935	142,154,730	RGD:1600115	UniPathway
G	Crbn	cereblon		ISS	4	142,135,935	142,154,730	RGD:1600115	UniProtKB
G	Cul1	cullin 1		ISO	4	75,636,914	75,705,724	RGD:1624291	RGD
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul3	cullin 3		ISO	9	79,574,062	79,634,396	RGD:1624291	RGD
G	Cul7	cullin 7		IEA	9	10,020,543	10,034,167	RGD:1600115	UniPathway
G	Dcaf11	DDB1 and CUL4 associated factor 11		IEA	15	33,691,576	33,701,328	RGD:1600115	UniPathway
G	Dcaf17	DDB1 and CUL4 associated factor 17		IEA	3	53,310,544	53,336,761	RGD:1600115	UniPathway
G	Dcaf8	DDB1 and CUL4 associated factor 8		IEA	13	88,029,285	88,186,506	RGD:1600115	UniPathway
G	Ddb1	damage-specific DNA binding protein 1, 127kDa		IEA	1	213,095,187	213,120,986	RGD:1600115	UniPathway
G	Enc1	ectodermal-neural cortex 1		ISO	2	27,720,805	27,733,168	RGD:1624291	RGD
G	Fancl	Fanconi anemia, complementation group L		ISO	14	107,211,448	107,276,828	RGD:1624291	RGD
G	Fbxl15	F-box and leucine-rich repeat protein 15		ISS	1	251,544,341	251,546,582	RGD:1600115	UniProtKB
G	Fbxl15	F-box and leucine-rich repeat protein 15		ISO	1	251,544,341	251,546,582	RGD:1624291	RGD
G	Fbxl5	F-box and leucine-rich repeat protein 5		ISO	14	72,471,063	72,510,384	RGD:1624291	RGD
G	Fbxl5	F-box and leucine-rich repeat protein 5		ISO	14	72,471,063	72,510,384	RGD:1624291	RGD
G	Fbxl5	F-box and leucine-rich repeat protein 5		ISO	14	72,471,063	72,510,384	RGD:1624291	RGD
G	Fbxl7	F-box and leucine-rich repeat protein 7		ISO	2	78,232,361	78,610,165	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		ISO	5	165,239,080	165,244,509	RGD:1624291	RGD
G	Fbxo25	F-box protein 25		ISO	16	80,505,562	80,536,104	RGD:1624291	RGD
G	Fbxo25	F-box protein 25		IEA	16	80,505,562	80,536,104	RGD:1600115	UniPathway
G	Fbxo25	F-box protein 25		ISS	16	80,505,562	80,536,104	RGD:1600115	UniProtKB
G	Fbxo31	F-box protein 31		IEA	19	51,836,918	51,837,223	RGD:1600115	UniPathway
G	Fbxo4	F-box protein 4		ISO	2	53,871,746	53,884,722	RGD:1624291	RGD
G	Fbxo43	F-box protein 43		IEA	7	71,670,329	71,683,901	RGD:1600115	UniPathway
G	Fbxo6	F-box protein 6		ISO	5	165,223,009	165,226,420	RGD:1624291	RGD
G	Fbxo7	F-box protein 7		IEA	7	19,947,498	19,975,730	RGD:1600115	UniPathway
G	Fbxo9	f-box protein 9		ISO	8	83,056,071	83,081,992	RGD:1624291	RGD
G	Fbxo9	f-box protein 9		IEA	8	83,056,071	83,081,992	RGD:1600115	UniPathway
G	Fbxo9	f-box protein 9		ISS	8	83,056,071	83,081,992	RGD:1600115	UniProtKB
G	Fbxw11	F-box and WD repeat domain containing 11		ISO	10	17,502,480	17,600,199	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		ISO	3	3,673,918	3,677,876	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		ISO	3	3,673,918	3,677,876	RGD:1624291	RGD
G	Fbxw5	F-box and WD repeat domain containing 5		IEA	3	3,673,918	3,677,876	RGD:1600115	UniPathway
G	Fbxw5	F-box and WD repeat domain containing 5		ISS	3	3,673,918	3,677,876	RGD:1600115	UniProtKB
G	Fbxw7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase		ISO	2	176,675,226	176,750,737	RGD:1624291	RGD
G	Fbxw7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase		ISO	2	176,675,226	176,750,737	RGD:1624291	RGD
G	Fem1b	fem-1 homolog b (C. elegans)		ISO	8	66,948,714	66,961,986	RGD:1624291	RGD
G	Gan	gigaxonin		ISO	19	47,263,532	47,310,683	RGD:1624291	RGD
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		ISS	20	49,856,040	49,973,091	RGD:1600115	UniProtKB
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		ISO	20	49,856,040	49,973,091	RGD:1624291	RGD
G	Herc2	HECT and RLD domain containing E3 ubiquitin protein ligase 2		ISO	1	107,440,126	107,645,117	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Katna1	katanin p60 (ATPase-containing) subunit A1		ISS	1	2,394,947	2,436,574	RGD:1600115	GOC
G	Kctd10	potassium channel tetramerization domain containing 10		ISS				RGD:1600115	UniProtKB
G	Kctd13	potassium channel tetramerisation domain containing 13		ISO	1	186,104,306	186,122,853	RGD:1624291	RGD
G	Keap1	Kelch-like ECH-associated protein 1		ISO	8	20,259,178	20,266,351	RGD:1624291	RGD
G	Keap1	Kelch-like ECH-associated protein 1		ISS	8	20,259,178	20,266,351	RGD:1600115	UniProtKB
G	Keap1	Kelch-like ECH-associated protein 1		IEA	8	20,259,178	20,266,351	RGD:1600115	UniPathway
G	Klhl13	kelch-like family member 13		ISO	X	10,344,050	10,424,665	RGD:1624291	RGD
G	Klhl17	kelch-like family member 17		IEA	5	173,064,739	173,069,548	RGD:1600115	UniPathway
G	Klhl2	kelch-like family member 2		ISS	16	26,634,400	26,690,756	RGD:1600115	UniProtKB
G	Klhl20	kelch-like family member 20		ISS	13	76,655,800	76,700,630	RGD:1600115	UniProtKB
G	Klhl20	kelch-like family member 20		ISO	13	76,655,800	76,700,630	RGD:1624291	RGD
G	Klhl21	kelch-like family member 21		ISS	5	169,236,427	169,246,001	RGD:1600115	UniProtKB
G	Klhl21	kelch-like family member 21		ISO	5	169,236,427	169,246,001	RGD:1624291	RGD
G	Klhl3	kelch-like family member 3		IEA	17	12,467,372	12,615,579	RGD:1600115	UniPathway
G	Klhl36	kelch-like family member 36		IEA	19	50,145,835	50,166,861	RGD:1600115	UniPathway
G	Klhl41	kelch-like family member 41		ISO	3	51,816,016	51,829,140	RGD:1624291	RGD
G	Klhl7	kelch-like family member 7		ISO	4	6,373,343	6,422,371	RGD:1624291	RGD
G	Klhl7	kelch-like family member 7		IEA	4	6,373,343	6,422,371	RGD:1600115	UniPathway
G	Klhl7	kelch-like family member 7		ISS	4	6,373,343	6,422,371	RGD:1600115	UniProtKB
G	Klhl9	kelch-like family member 9		ISO	5	108,196,981	108,201,165	RGD:1624291	RGD
G	LOC686711	similar to von Hippel-Lindau syndrome protein homolog		IEA				RGD:1600115	InterPro
G	Lrrc41	leucine rich repeat containing 41		IEA	5	136,234,186	136,255,107	RGD:1600115	UniPathway
G	Malt1	mucosa associated lymphoid tissue lymphoma translocation gene 1		ISO	18	61,708,388	61,760,004	RGD:1624291	RGD
G	Malt1	mucosa associated lymphoid tissue lymphoma translocation gene 1		ISO	18	61,708,388	61,760,004	RGD:1624291	RGD
G	March10	membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase		IEA	10	94,762,789	94,855,777	RGD:1600115	UniPathway
G	March11	membrane-associated ring finger (C3HC4) 11		IEA	2	77,989,651	78,090,956	RGD:1600115	UniPathway
G	March2	membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase		ISO	7	16,193,114	16,219,081	RGD:1624291	RGD
G	March2	membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase		ISS	7	16,193,114	16,219,081	RGD:1600115	UniProtKB
G	March3	membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase		IEA	18	52,530,738	52,682,742	RGD:1600115	UniPathway
G	March7	membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase		IEA	3	41,922,568	41,954,630	RGD:1600115	UniPathway
G	March8	membrane-associated ring finger (C3HC4) 8, E3 ubiquitin protein ligase		ISO	4	152,494,801	152,609,538	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		IMP	7	56,996,694	57,020,926	RGD:2316094	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mib2	mindbomb E3 ubiquitin protein ligase 2		ISO	5	172,490,963	172,497,379	RGD:1624291	RGD
G	Mul1	mitochondrial E3 ubiquitin protein ligase 1		ISO	5	157,213,350	157,222,401	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4l	neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase		ISO	18	61,134,242	61,477,040	RGD:1624291	RGD
G	Neurl2	neuralized homolog 2 (Drosophila)		IEA	3	155,863,669	155,865,955	RGD:1600115	UniPathway
G	Neurl3	neuralized homolog 3 (Drosophila)		IEA	9	35,190,429	35,198,526	RGD:1600115	UniPathway
G	Neurod2	neuronal differentiation 2		ISO	10	87,097,850	87,111,300	RGD:1624291	RGD
G	Neurod2	neuronal differentiation 2		ISS	10	87,097,850	87,111,300	RGD:1600115	UniProtKB
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISO	3	58,366,693	58,394,116	RGD:1624291	RGD
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISS	3	58,366,693	58,394,116	RGD:1600115	UniProtKB
G	Nsmce1	non-SMC element 1 homolog (S. cerevisiae)		ISO	1	184,528,343	184,553,824	RGD:1624291	RGD
G	Nub1	negative regulator of ubiquitin-like proteins 1		ISO	4	5,820,488	5,850,809	RGD:1624291	RGD
G	Os9	osteosarcoma amplified 9		ISO	7	67,046,802	67,073,355	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Pax6	paired box 6		ISS	3	91,127,605	91,149,178	RGD:1600115	GOC
G	Pcnp	PEST proteolytic signal containing nuclear protein		ISO	11	45,572,442	45,580,616	RGD:1624291	RGD
G	Pcnp	PEST proteolytic signal containing nuclear protein		ISS	11	45,572,442	45,580,616	RGD:1600115	HGNC
G	Pdzrn3	PDZ domain containing RING finger 3		ISO	4	136,044,210	136,254,969	RGD:1624291	RGD
G	Pdzrn3	PDZ domain containing RING finger 3		ISS	4	136,044,210	136,254,969	RGD:1600115	UniProtKB
G	Pja2	praja ring finger 2, E3 ubiquitin protein ligase		ISO	9	103,002,778	103,054,007	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISO	1	181,002,811	181,012,741	RGD:1624291	RGD
G	Rab40b	Rab40b, member RAS oncogene family		IEA	10	110,590,703	110,618,223	RGD:1600115	UniPathway
G	Rab40c	Rab40c, member RAS oncogene family		IEA	10	15,147,861	15,181,653	RGD:1600115	UniPathway
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rbx1	ring-box 1, E3 ubiquitin protein ligase		ISO	7	119,794,976	119,805,104	RGD:1624291	RGD
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		ISO	14	17,683,377	17,698,982	RGD:1624291	RGD
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		ISO	14	17,683,377	17,698,982	RGD:1624291	RGD
G	Rffl	ring finger and FYVE-like domain containing E3 ubiquitin protein ligase		IEA	10	71,025,035	71,047,280	RGD:1600115	UniPathway
G	Rfwd3	ring finger and WD repeat domain 3		ISO	19	41,190,144	41,222,888	RGD:1624291	RGD
G	Rlim	ring finger protein, LIM domain interacting		ISO	X	91,969,453	91,985,349	RGD:1624291	RGD
G	Rnf103	ring finger protein 103		ISO	4	104,762,184	104,778,157	RGD:1624291	RGD
G	Rnf103	ring finger protein 103		ISS	4	104,762,184	104,778,157	RGD:1600115	UniProtKB
G	Rnf123	ring finger protein 123		IEA	8	113,319,535	113,347,035	RGD:1600115	UniPathway
G	Rnf128	ring finger protein 128, E3 ubiquitin protein ligase		ISO	X	127,309,082	127,367,165	RGD:1624291	RGD
G	Rnf133	ring finger protein 133		IEA	4	50,024,631	50,025,986	RGD:1600115	UniPathway
G	Rnf135	ring finger protein 135		ISO	10	68,395,227	68,413,513	RGD:1624291	RGD
G	Rnf135	ring finger protein 135		ISO	10	68,395,227	68,413,513	RGD:1624291	RGD
G	Rnf135	ring finger protein 135		ISS	10	68,395,227	68,413,513	RGD:1600115	UniProtKB
G	Rnf138	ring finger protein 138, E3 ubiquitin protein ligase		IEA	18	12,764,220	12,788,635	RGD:1600115	UniPathway
G	Rnf139	ring finger protein 139		ISO	7	95,659,052	95,661,624	RGD:1624291	RGD
G	Rnf139	ring finger protein 139		ISO	7	95,659,052	95,661,624	RGD:1624291	RGD
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISS	11	70,304,917	70,328,010	RGD:1600115	UniProtKB
G	Rnf168	ring finger protein 168, E3 ubiquitin protein ligase		ISO	11	70,304,917	70,328,010	RGD:1624291	RGD
G	Rnf180	ring finger protein 180		ISO	2	36,186,010	36,253,660	RGD:1624291	RGD
G	Rnf181	ring finger protein 181		IEA	4	105,664,599	105,671,321	RGD:1600115	UniPathway
G	Rnf182	ring finger protein 182		ISS	17	26,854,383	26,902,894	RGD:1600115	UniProtKB
G	Rnf182	ring finger protein 182		ISO	17	26,854,383	26,902,894	RGD:1624291	RGD
G	Rnf185	ring finger protein 185		IEA	14	84,043,727	84,081,442	RGD:1600115	UniPathway
G	Rnf25	ring finger protein 25		ISO	9	73,944,151	73,950,963	RGD:1624291	RGD
G	Rnf31	ring finger protein 31		ISO	15	33,727,541	33,739,204	RGD:1624291	RGD
G	Rnf4	ring finger protein 4		IMP	14	82,092,024	82,112,036		UniProtKB
G	Rnf43	ring finger protein 43		ISO	10	75,957,792	76,027,392	RGD:1624291	RGD
G	Rnf6	ring finger protein (C3H2C3 type) 6		ISO	12	9,193,659	9,203,700	RGD:1624291	RGD
G	Sh3rf1	SH3 domain containing ring finger 1		IEA	16	32,054,773	32,215,987	RGD:1600115	UniPathway
G	Sh3rf2	SH3 domain containing ring finger 2		IEA	18	35,242,898	35,344,485	RGD:1600115	UniPathway
G	Sirt1	sirtuin 1		IEA	20	25,675,302	25,686,494	RGD:1600115	ENSEMBL
G	Sirt1	sirtuin 1		ISO	20	25,675,302	25,686,494	RGD:1624291	RGD
G	Skp1	S-phase kinase-associated protein 1		ISO	10	37,665,417	37,680,338	RGD:1624291	RGD
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Socs1	suppressor of cytokine signaling 1		IEA	10	4,819,971	4,820,609	RGD:1600115	UniPathway
G	Socs2	suppressor of cytokine signaling 2		IEA	7	32,605,714	32,608,323	RGD:1600115	UniPathway
G	Socs3	suppressor of cytokine signaling 3		IEA	10	107,958,468	107,959,330	RGD:1600115	UniPathway
G	Socs4	suppressor of cytokine signaling 4		IEA	15	23,229,083	23,243,568	RGD:1600115	UniPathway
G	Socs5	suppressor of cytokine signaling 5		IEA	6	10,552,177	10,582,783	RGD:1600115	UniPathway
G	Socs6	suppressor of cytokine signaling 6		IEA	18	85,722,868	85,725,214	RGD:1600115	UniPathway
G	Socs7	suppressor of cytokine signaling 7		ISO	10	86,090,339	86,134,313	RGD:1624291	RGD
G	Socs7	suppressor of cytokine signaling 7		IEA	10	86,090,339	86,134,313	RGD:1600115	UniPathway
G	Spsb1	splA/ryanodine receptor domain and SOCS box containing 1		IEA	5	167,014,271	167,025,579	RGD:1600115	UniPathway
G	Spsb2	splA/ryanodine receptor domain and SOCS box containing 2		IEA	4	160,931,693	160,933,346	RGD:1600115	UniPathway
G	Spsb3	splA/ryanodine receptor domain and SOCS box containing 3		IEA	10	14,135,818	14,140,923	RGD:1600115	UniPathway
G	Spsb4	splA/ryanodine receptor domain and SOCS box containing 4		IEA	8	102,034,525	102,107,618	RGD:1600115	UniPathway
G	Tceb2	transcription elongation factor B (SIII), polypeptide 2		IEA	10	13,084,817	13,089,619	RGD:1600115	UniPathway
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)		ISO	10	64,632,189	64,646,879	RGD:1624291	RGD
G	Tnfaip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)		ISS	10	64,632,189	64,646,879	RGD:1600115	UniProtKB
G	Traf6	TNF receptor-associated factor 6, E3 ubiquitin protein ligase		ISO	3	86,827,582	86,847,408	RGD:1624291	RGD
G	Traf7	TNF receptor-associated factor 7, E3 ubiquitin protein ligase		ISO	10	13,760,687	13,779,228	RGD:1624291	RGD
G	Trim11	tripartite motif-containing 11		IEA	10	45,270,583	45,283,954	RGD:1600115	UniPathway
G	Trim2	tripartite motif-containing 2		ISO	2	175,908,880	175,974,709	RGD:1624291	RGD
G	Trim2	tripartite motif-containing 2		ISO	2	175,908,880	175,974,709	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		ISO	1	160,175,882	160,187,661	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		ISO	1	160,175,882	160,187,661	RGD:1624291	RGD
G	Trim21	tripartite motif-containing 21		ISO	1	160,175,882	160,187,661	RGD:1624291	RGD
G	Trim23	tripartite motif-containing 23		ISO	2	35,101,019	35,135,028	RGD:1624291	RGD
G	Trim23	tripartite motif-containing 23		ISS	2	35,101,019	35,135,028	RGD:1600115	HGNC
G	Trim24	tripartite motif-containing 24		ISO	4	65,490,076	65,543,305	RGD:1624291	RGD
G	Trim24	tripartite motif-containing 24		ISO	4	65,490,076	65,543,305	RGD:1624291	RGD
G	Trim27	tripartite motif-containing 27		ISO	17	51,192,286	51,204,942	RGD:1624291	RGD
G	Trim28	tripartite motif-containing 28		ISO	1	72,892,399	72,899,070	RGD:1624291	RGD
G	Trim32	tripartite motif-containing 32		ISO	5	82,380,439	82,391,290	RGD:1624291	RGD
G	Trim32	tripartite motif-containing 32		ISO	5	82,380,439	82,391,290	RGD:1624291	RGD
G	Trim33	tripartite motif-containing 33		ISO	2	198,525,829	198,603,543	RGD:1624291	RGD
G	Trim39	tripartite motif-containing 39		IEA	20	2,091,969	2,105,824	RGD:1600115	UniPathway
G	Trim63	tripartite motif containing 63, E3 ubiquitin protein ligase		ISO	5	153,059,573	153,073,907	RGD:1624291	RGD
G	Trpc4ap	transient receptor potential cation channel, subfamily C, member 4 associated protein		ISO	3	146,139,493	146,206,625	RGD:1624291	RGD
G	Tulp4	tubby like protein 4		IEA	1	40,912,287	41,010,505	RGD:1600115	UniPathway
G	Uba1	ubiquitin-like modifier activating enzyme 1		IEA	X	12,926,049	12,944,522	RGD:1600115	UniPathway
G	Uba6	ubiquitin-like modifier activating enzyme 6		ISO	14	23,666,102	23,729,920	RGD:1624291	RGD
G	Uba6	ubiquitin-like modifier activating enzyme 6		ISO	14	23,666,102	23,729,920	RGD:1624291	RGD
G	Ubac1	UBA domain containing 1		IEA	3	4,178,964	4,201,546	RGD:1600115	UniPathway
G	Ubd	ubiquitin D		ISO	20	1,475,944	1,477,895	RGD:1624291	RGD
G	Ubd	ubiquitin D		ISO	20	1,475,944	1,477,895	RGD:1624291	RGD
G	Ubd	ubiquitin D		ISO	20	1,475,944	1,477,895	RGD:1624291	RGD
G	Ubd	ubiquitin D		ISO	20	1,475,944	1,477,895	RGD:1624291	RGD
G	Ubd	ubiquitin D		ISS	20	1,475,944	1,477,895	RGD:1600115	UniProtKB
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2b	ubiquitin-conjugating enzyme E2B		ISO	10	37,509,322	37,523,900	RGD:1624291	RGD
G	Ube2c	ubiquitin-conjugating enzyme E2C		ISO	3	155,800,357	155,802,757	RGD:1624291	RGD
G	Ube2d2	ubiquitin-conjugating enzyme E2D 2		ISO	18	28,426,503	28,434,785	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2d3	ubiquitin-conjugating enzyme E2D 3		ISO	2	232,943,214	232,971,022	RGD:1624291	RGD
G	Ube2g1	ubiquitin-conjugating enzyme E2G 1		TAS	10	59,495,501	59,576,926	RGD:634475	RGD
G	Ube2i	ubiquitin-conjugating enzyme E2I		IDA	10	14,509,948	14,524,551	RGD:730030	GOC
G	Ube2m	ubiquitin-conjugating enzyme E2M		ISO	1	72,885,667	72,889,204	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		TAS	7	32,719,959	32,750,002	RGD:724779	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
G	Ube3a	ubiquitin protein ligase E3A		ISO	1	110,729,142	110,816,491	RGD:1624291	RGD
G	Ube3d	ubiquitin protein ligase E3D		IEA	8	91,537,389	91,704,052	RGD:1600115	UniPathway
G	Ube4b	ubiquitination factor E4B		ISO	5	166,406,498	166,508,716	RGD:1624291	RGD
G	Ubr1	ubiquitin protein ligase E3 component n-recognin 1		ISO	3	107,632,668	107,746,611	RGD:1624291	RGD
G	Ubr1	ubiquitin protein ligase E3 component n-recognin 1		ISO	3	107,632,668	107,746,611	RGD:1624291	RGD
G	Ubr2	ubiquitin protein ligase E3 component n-recognin 2		ISO	9	9,165,363	9,247,261	RGD:1624291	RGD
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5		TAS	7	73,467,676	73,545,246	RGD:625681	RGD
G	Uhrf2	ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase		ISO	1	233,777,723	233,841,343	RGD:1624291	RGD
G	Uvssa	UV-stimulated scaffold protein A		ISS	14	83,163,555	83,199,401	RGD:1600115	UniProtKB
G	Uvssa	UV-stimulated scaffold protein A		ISO	14	83,163,555	83,199,401	RGD:1624291	RGD
G	Vcp	valosin-containing protein		ISS	5	59,472,100	59,491,508	RGD:1600115	UniProtKB
G	Vcp	valosin-containing protein		ISO	5	59,472,100	59,491,508	RGD:1624291	RGD
G	Vcpip1	valosin containing protein (p97)/p47 complex interacting protein 1		IDA	5	9,088,295	9,114,936	RGD:1302353	UniProtKB
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		ISO	4	149,529,396	149,536,289	RGD:1624291	RGD
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		IEA	4	149,529,396	149,536,289	RGD:1600115	UniPathway
G	Wsb1	WD repeat and SOCS box-containing 1		IEA	10	65,427,131	65,443,208	RGD:1600115	UniPathway
G	Wsb2	WD repeat and SOCS box-containing 2		IEA	12	40,406,890	40,427,103	RGD:1600115	UniPathway
G	Wwp1	WW domain containing E3 ubiquitin protein ligase 1		ISO	5	34,238,505	34,325,951	RGD:1624291	RGD
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Xiap	X-linked inhibitor of apoptosis		ISS	X	3,011,520	3,047,798	RGD:1600115	GOC
G	Zer1	zyg-11 related, cell cycle regulator		ISO	3	9,102,502	9,118,423	RGD:1624291	RGD
G	Znrf3	zinc and ring finger 3		ISO	14	85,927,245	85,982,249	RGD:1624291	RGD
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arel1	apoptosis resistant E3 ubiquitin protein ligase 1		IBA	6	108,963,520	108,992,271	RGD:1600115	RefGenome
G	Arih2	ariadne homolog 2 (Drosophila)		ISO	8	113,647,000	113,705,922	RGD:1624291	RGD
G	Arih2	ariadne homolog 2 (Drosophila)		IEA	8	113,647,000	113,705,922	RGD:1600115	ENSEMBL
G	Asb2	ankyrin repeat and SOCS box-containing 2		ISO	6	127,609,500	127,645,492	RGD:1624291	RGD
G	Cblc	Cbl proto-oncogene, E3 ubiquitin protein ligase C		IEA	1	79,091,412	79,108,189	RGD:1600115	ENSEMBL
G	Cblc	Cbl proto-oncogene, E3 ubiquitin protein ligase C		ISO	1	79,091,412	79,108,189	RGD:1624291	RGD
G	Ddb1	damage-specific DNA binding protein 1, 127kDa		ISO	1	213,095,187	213,120,986	RGD:1624291	RGD
G	Ddb1	damage-specific DNA binding protein 1, 127kDa		IEA	1	213,095,187	213,120,986	RGD:1600115	ENSEMBL
G	Fbxl14	F-box and leucine-rich repeat protein 14		ISO	4	155,824,662	155,826,479	RGD:1624291	RGD
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		IBA	20	49,856,040	49,973,091	RGD:1600115	RefGenome
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		ISS	20	49,856,040	49,973,091	RGD:1600115	UniProtKB
G	Hace1	HECT domain and ankyrin repeat containing, E3 ubiquitin protein ligase 1		ISO	20	49,856,040	49,973,091	RGD:1624291	RGD
G	Hectd1	HECT domain containing E3 ubiquitin protein ligase 1		IBA	6	71,842,842	71,930,042	RGD:1600115	RefGenome
G	Hectd2	HECT domain containing 2		IBA	1	240,791,754	240,835,395	RGD:1600115	RefGenome
G	Hecw1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1		IBA	17	58,856,317	59,275,923	RGD:1600115	RefGenome
G	Hecw2	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2		IBA	9	52,623,951	52,839,918	RGD:1600115	RefGenome
G	Herc2	HECT and RLD domain containing E3 ubiquitin protein ligase 2		IBA	1	107,440,126	107,645,117	RGD:1600115	RefGenome
G	Herc3	HECT and RLD domain containing E3 ubiquitin protein ligase 3		IBA	4	87,725,194	87,816,242	RGD:1600115	RefGenome
G	Herc6	HECT and RLD domain containing E3 ubiquitin protein ligase family member 6		IBA	4	87,278,557	87,343,287	RGD:1600115	RefGenome
G	Itch	itchy E3 ubiquitin protein ligase		ISO	3	145,644,315	145,707,190	RGD:1624291	RGD
G	Itch	itchy E3 ubiquitin protein ligase		IBA	3	145,644,315	145,707,190	RGD:1600115	RefGenome
G	Lnx1	ligand of numb-protein X 1, E3 ubiquitin protein ligase		ISO	14	35,888,702	35,992,436	RGD:1624291	RGD
G	Lnx1	ligand of numb-protein X 1, E3 ubiquitin protein ligase		IEA	14	35,888,702	35,992,436	RGD:1600115	ENSEMBL
G	LOC501546	hypothetical protein LOC501546		IBA	X	41,269,837	41,397,687	RGD:1600115	RefGenome
G	Map3k1	mitogen activated protein kinase kinase kinase 1		IGI	2	43,062,252	43,126,058	RGD:729224	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		ISO	7	56,996,694	57,020,926	RGD:1624291	RGD
G	Mdm2	p53 E3 ubiquitin protein ligase		IEA	7	56,996,694	57,020,926	RGD:1600115	ENSEMBL
G	Mylip	myosin regulatory light chain interacting protein		IEA	17	25,308,147	25,329,887	RGD:1600115	ENSEMBL
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		ISO	8	77,252,500	77,337,402	RGD:1624291	RGD
G	Nedd4	neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase		IBA	8	77,252,500	77,337,402	RGD:1600115	RefGenome
G	Nedd4l	neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase		IBA	18	61,134,242	61,477,040	RGD:1600115	RefGenome
G	Os9	osteosarcoma amplified 9		ISO	7	67,046,802	67,073,355	RGD:1624291	RGD
G	Park2	parkinson protein 2, E3 ubiquitin protein ligase		ISO	1	43,151,265	44,374,470	RGD:1624291	RGD
G	Rbbp6	retinoblastoma binding protein 6		ISO	1	181,818,248	181,849,942	RGD:1624291	RGD
G	Rbbp6	retinoblastoma binding protein 6		IEA	1	181,818,248	181,849,942	RGD:1600115	ENSEMBL
G	Rchy1	ring finger and CHY zinc finger domain containing 1, E3 ubiquitin protein ligase		ISO	14	17,683,377	17,698,982	RGD:1624291	RGD
G	RGD1309762	similar to KIAA0614 protein		IBA	12	36,318,373	36,423,169	RGD:1600115	RefGenome
G	RGD1309823	similar to hypothetical protein FLJ21156		IBA	5	137,300,780	137,310,153	RGD:1600115	RefGenome
G	Rnf11	ring finger protein 11		ISO	5	130,807,625	130,830,929	RGD:1624291	RGD
G	Rnf144b	ring finger protein 144B		IEA	17	23,483,622	23,615,443	RGD:1600115	ENSEMBL
G	Rnf144b	ring finger protein 144B		ISO	17	23,483,622	23,615,443	RGD:1624291	RGD
G	Rnf146	ring finger protein 146		ISO	1	29,255,138	29,265,731	RGD:1624291	RGD
G	Rnf146	ring finger protein 146		ISS	1	29,255,138	29,265,731	RGD:1600115	UniProtKB
G	Rnf43	ring finger protein 43		IEA	10	75,957,792	76,027,392	RGD:1600115	ENSEMBL
G	Rnf43	ring finger protein 43		ISO	10	75,957,792	76,027,392	RGD:1624291	RGD
G	Siah1a	seven in absentia 1A		IDA	19	21,717,141	21,740,751	RGD:633984	RGD
G	Siah1a	seven in absentia 1A		ISO	19	21,717,141	21,740,751	RGD:1624291	RGD
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		IBA	12	9,950,304	10,042,391	RGD:1600115	RefGenome
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Smurf1	SMAD specific E3 ubiquitin protein ligase 1		ISO	12	9,950,304	10,042,391	RGD:1624291	RGD
G	Smurf2	SMAD specific E3 ubiquitin protein ligase 2		IBA	10	96,170,590	96,269,365	RGD:1600115	RefGenome
G	Spop	speckle-type POZ protein		ISO	10	84,099,990	84,185,130	RGD:1624291	RGD
G	Trim32	tripartite motif-containing 32		ISO	5	82,380,439	82,391,290	RGD:1624291	RGD
G	Trip12	thyroid hormone receptor interactor 12		IBA	9	83,961,411	84,085,077	RGD:1600115	RefGenome
G	Trip12	thyroid hormone receptor interactor 12		ISS	9	83,961,411	84,085,077	RGD:1600115	UniProtKB
G	Trip12	thyroid hormone receptor interactor 12		ISO	9	83,961,411	84,085,077	RGD:1624291	RGD
G	Trip12	thyroid hormone receptor interactor 12		ISO	9	83,961,411	84,085,077	RGD:1624291	RGD
G	Trip12	thyroid hormone receptor interactor 12		ISO	9	83,961,411	84,085,077	RGD:1624291	RGD
G	Ube3a	ubiquitin protein ligase E3A		IBA	1	110,729,142	110,816,491	RGD:1600115	RefGenome
G	Ube3c	ubiquitin protein ligase E3C		IBA	4	889,640	991,900	RGD:1600115	RefGenome
G	Ubr5	ubiquitin protein ligase E3 component n-recognin 5		IBA	7	73,467,676	73,545,246	RGD:1600115	RefGenome
G	Uhrf1	ubiquitin-like with PHD and ring finger domains 1		ISO				RGD:1624291	RGD
G	Wwp1	WW domain containing E3 ubiquitin protein ligase 1		IBA	5	34,238,505	34,325,951	RGD:1600115	RefGenome
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		IBA	19	37,302,346	37,428,377	RGD:1600115	RefGenome
regulation of histone ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ube2n	ubiquitin-conjugating enzyme E2N		ISO	7	32,719,959	32,750,002	RGD:1624291	RGD
regulation of protein ubiquitination
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Atg7	autophagy related 7		ISO	4	150,814,706	150,992,704	RGD:1624291	RGD
G	Atg7	autophagy related 7		IEA	4	150,814,706	150,992,704	RGD:1600115	ENSEMBL
G	Daxx	death-domain associated protein		ISO	20	5,121,854	5,127,601	RGD:1624291	RGD
G	Daxx	death-domain associated protein		IEA	20	5,121,854	5,127,601	RGD:1600115	ENSEMBL
G	Daxx	death-domain associated protein		ISS	20	5,121,854	5,127,601	RGD:1600115	UniProtKB
G	Fbxo2	F-box protein 2		ISO	5	165,239,080	165,244,509	RGD:1624291	RGD
G	Fbxo2	F-box protein 2		IEA	5	165,239,080	165,244,509	RGD:1600115	ENSEMBL
G	Herpud1	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1		ISO	19	11,036,567	11,046,914	RGD:1624291	RGD
G	Herpud1	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1		IEA	19	11,036,567	11,046,914	RGD:1600115	ENSEMBL
G	LOC100363283	UBX domain protein 2A		IEA	6	28,187,320	28,213,193	RGD:1600115	ENSEMBL
G	Mapk9	mitogen-activated protein kinase 9		IMP	10	35,353,486	35,384,319	RGD:2304246	RGD
G	Pink1	PTEN induced putative kinase 1		IEA	5	157,091,181	157,103,293	RGD:1600115	ENSEMBL
G	Pink1	PTEN induced putative kinase 1		ISO	5	157,091,181	157,103,293	RGD:1624291	RGD
G	Rnf139	ring finger protein 139		ISO	7	95,659,052	95,661,624	RGD:1624291	RGD
G	Siah2	siah E3 ubiquitin protein ligase 2		IDA	2	148,022,641	148,040,390	RGD:633984	RGD
G	Ubqln1	ubiquilin 1		ISO	17	12,370,389	12,418,868	RGD:1624291	RGD
G	Ubqln1	ubiquilin 1		ISS	17	12,370,389	12,418,868	RGD:1600115	HGNC
G	Ubxn2a	UBX domain protein 2A		IEA	6	29,554,836	29,558,146	RGD:1600115	ENSEMBL
regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ptk2b	protein tyrosine kinase 2 beta		ISO	15	45,589,222	45,717,866	RGD:1624291	RGD
regulation of ubiquitin-protein ligase activity
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Fem1a	fem-1 homolog a (C. elegans)		ISS				RGD:1600115	UniProtKB
G	Fem1b	fem-1 homolog b (C. elegans)		IEA	8	66,948,714	66,961,986	RGD:1600115	ENSEMBL
G	Fem1b	fem-1 homolog b (C. elegans)		ISO	8	66,948,714	66,961,986	RGD:1624291	RGD
G	Zer1	zyg-11 related, cell cycle regulator		IEA	3	9,102,502	9,118,423	RGD:1600115	ENSEMBL
G	Zer1	zyg-11 related, cell cycle regulator		ISO	3	9,102,502	9,118,423	RGD:1624291	RGD

Term paths to the root

Path 1
Term	Annotations
biological_process	135967
metabolic process	36390
cellular metabolic process	30423
cellular macromolecule metabolic process	21835
cellular protein metabolic process	8782
cellular protein modification process	6841
protein modification by small protein conjugation or removal	1370
protein modification by small protein conjugation	1172
Smt3-protein conjugation	0
protein neddylation +	16
protein pupylation	0
protein sumoylation +	74
protein ubiquitination +	1067
protein ufmylation	11
protein urmylation	0
Path 2
Term	Annotations
biological_process	135967
metabolic process	36390
organic substance metabolic process	32723
macromolecule metabolic process	25172
protein metabolic process