forebrain regionalization - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	forebrain regionalization	go back to main search page
Accession:	GO:0021871	browse the term
Definition:	The regionalization process resulting in the creation of areas within the forebrain that will direct the behavior of cell migration in differentiation as the forebrain develops.
Comment:	This term was added by GO_REF:0000021.

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forebrain regionalization
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Lhx1	LIM homeobox 1		ISO	10	72,800,497	72,805,799	RGD:1624291	RGD
G	Lhx1	LIM homeobox 1		ISS	10	72,800,497	72,805,799	RGD:1600115	UniProtKB
G	Pgap1	post-GPI attachment to proteins 1		ISO	9	53,263,168	53,337,447	RGD:1624291	RGD
G	Pgap1	post-GPI attachment to proteins 1		IEA	9	53,263,168	53,337,447	RGD:1600115	ENSEMBL
G	Wnt2b	wingless-type MMTV integration site family, member 2B		ISO	2	200,218,630	200,233,002	RGD:1624291	RGD
G	Wnt2b	wingless-type MMTV integration site family, member 2B		IEA	2	200,218,630	200,233,002	RGD:1600115	ENSEMBL
G	Wnt7b	wingless-type MMTV integration site family, member 7B		ISO	7	123,533,713	123,554,333	RGD:1624291	RGD
G	Wnt7b	wingless-type MMTV integration site family, member 7B		IEA	7	123,533,713	123,554,333	RGD:1600115	ENSEMBL
cerebral cortex regionalization
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Emx1	empty spiracles homeobox 1		ISO	4	119,420,621	119,436,740	RGD:1624291	RGD
G	Emx1	empty spiracles homeobox 1		IEA	4	119,420,621	119,436,740	RGD:1600115	ENSEMBL
G	Emx2	empty spiracles homeobox 2		ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2		ISO	1	266,004,257	266,011,265	RGD:1624291	RGD
G	Emx2	empty spiracles homeobox 2		IEA	1	266,004,257	266,011,265	RGD:1600115	ENSEMBL
G	Nr2f1	nuclear receptor subfamily 2, group F, member 1		ISO	2	5,765,399	5,794,104	RGD:1624291	RGD
G	Pax6	paired box 6		ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6		IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
forebrain anterior/posterior pattern specification
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Axin1	axin 1		IBA	10	15,409,373	15,462,726	RGD:1600115	RefGenome
G	Fezf1	Fez family zinc finger 1		ISO	4	49,641,144	49,644,471	RGD:1624291	RGD
G	Fezf1	Fez family zinc finger 1		IEA	4	49,641,144	49,644,471	RGD:1600115	ENSEMBL
G	Fezf2	Fez family zinc finger 2		ISO	15	14,350,796	14,354,585	RGD:1624291	RGD
G	Fezf2	Fez family zinc finger 2		IEA	15	14,350,796	14,354,585	RGD:1600115	ENSEMBL
G	Pax6	paired box 6		ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6		IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
G	Six3	SIX homeobox 3		ISO	6	8,981,995	9,019,365	RGD:1624291	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1		ISO	7	137,557,836	137,561,883	RGD:1624291	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1		IEA	7	137,557,836	137,561,883	RGD:1600115	ENSEMBL
forebrain dorsal/ventral pattern formation
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf8	fibroblast growth factor 8		ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8		IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
G	Gli3	GLI family zinc finger 3		IMP	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3		ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gsx2	GS homeobox 2		ISO	14	35,489,441	35,491,165	RGD:1624291	RGD
G	Gsx2	GS homeobox 2		ISO	14	35,489,441	35,491,165	RGD:1624291	RGD
G	Gsx2	GS homeobox 2		IEA	14	35,489,441	35,491,165	RGD:1600115	ENSEMBL
G	Nkx2-1	NK2 homeobox 1		ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1		ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1		ISO	6	76,916,943	76,920,133	RGD:1624291	RGD
G	Nkx2-1	NK2 homeobox 1		IEA	6	76,916,943	76,920,133	RGD:1600115	ENSEMBL
G	Pax6	paired box 6		ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6		ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6		IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
telencephalon regionalization
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bmp2	bone morphogenetic protein 2		ISO	3	121,372,692	121,381,236	RGD:1624291	RGD
G	Bmp2	bone morphogenetic protein 2		IEA	3	121,372,692	121,381,236	RGD:1600115	ENSEMBL
G	Bmp4	bone morphogenetic protein 4		ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4		ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4		IEA	15	22,283,171	22,286,757	RGD:1600115	ENSEMBL
G	Lhx2	LIM homeobox 2		ISO	3	18,129,455	18,147,357	RGD:1624291	RGD
G	Lhx2	LIM homeobox 2		IEA	3	18,129,455	18,147,357	RGD:1600115	ENSEMBL
G	Shh	sonic hedgehog		IMP	4	2,200,504	2,209,657	RGD:2306311	RGD
G	Shh	sonic hedgehog		ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Shh	sonic hedgehog		IEA	4	2,200,504	2,209,657	RGD:1600115	ENSEMBL

Term paths to the root

Path 1
Term	Annotations
biological_process	135967
developmental process	29431
single-organism developmental process	22738
forebrain development	1018
forebrain regionalization	50
forebrain anterior/posterior pattern specification	10
forebrain dorsal/ventral pattern formation	14
telencephalon regionalization +	18
Path 2
Term	Annotations
biological_process	135967
single-organism process	88399
single-multicellular organism process	36068
multicellular organismal development	24588
system development	21128
nervous system development	6807
central nervous system development	2514
brain development	1803
forebrain development	1018
forebrain regionalization	50
forebrain anterior/posterior pattern specification	10
forebrain dorsal/ventral pattern formation	14
telencephalon regionalization +	18