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ONTOLOGY REPORT - ANNOTATIONS

Term:nitrogen utilization
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Accession:GO:0019740 term browser browse the term
Definition:A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism.

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ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asl argininosuccinate lyase acts_upstream_of_or_within ISO (PMID:12559843) MGI PMID:12559843 NCBI chrNW_004955456:8,409,767...8,419,915
Ensembl chrNW_004955456:8,411,220...8,416,992 		JBrowse link
G Glul glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chrNW_004955406:21,266,383...21,274,546
Ensembl chrNW_004955406:21,266,383...21,275,309 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr1h4 nuclear receptor subfamily 1 group H member 4 involved_in ISO (MGI:5306122|PMID:21757002) BHF-UCL PMID:21757002 MGI:5306122 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751 		JBrowse link
regulation of nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bax BCL2 associated X, apoptosis regulator acts_upstream_of_or_within ISO (PMID:9241272) MGI PMID:9241272 NCBI chrNW_004955559:1,695,960...1,700,246
Ensembl chrNW_004955559:1,695,960...1,700,244 		JBrowse link
G Bcl2 BCL2 apoptosis regulator acts_upstream_of_or_within ISO (PMID:9241272) MGI PMID:9241272 NCBI chrNW_004955402:46,911,125...47,084,214
Ensembl chrNW_004955402:46,916,266...47,084,485 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 12346
    response to stimulus 6681
      response to nutrient levels 722
        nitrogen utilization 5
          ammonia assimilation cycle + 3
          negative regulation of nitrogen utilization + 0
          positive regulation of nitrogen utilization + 1
          regulation of nitrogen utilization + 3
Path 2
Term Annotations click to browse term
  biological_process 12346
    homeostatic process 1655
      cellular homeostasis 777
        intracellular chemical homeostasis 689
          intracellular nitrogen homeostasis 5
            nitrogen utilization 5
              ammonia assimilation cycle + 3
              negative regulation of nitrogen utilization + 0
              positive regulation of nitrogen utilization + 1
              regulation of nitrogen utilization + 3
paths to the root