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ONTOLOGY REPORT - ANNOTATIONS

Term:nitrogen utilization
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Accession:GO:0019740 term browser browse the term
Definition:A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary nitrogen source, usually ammonia, and then activates genes to scavenge the last traces of the primary nitrogen source and to transport and metabolize alternative nitrogen sources. The utilization process begins when the cell or organism detects nitrogen levels, includes the activation of genes whose products detect, transport or metabolize nitrogen-containing substances, and ends when nitrogen is incorporated into the cell or organism's metabolism.


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nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G LGSN lengsin, lens protein with glutamine synthetase domain involved_in IEA TreeGrafter GO_REF:0000118 NCBI chr 6:60,964,873...61,008,833
Ensembl chr 6:66,239,052...66,280,600 		JBrowse link
ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G GLUL glutamate-ammonia ligase ISO RGD PMID:28323 RGD:2301547 NCBI chr 1:157,882,258...157,891,562
Ensembl chr 1:161,534,106...161,543,411 		JBrowse link
positive regulation of ammonia assimilation cycle term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G NR1H4 nuclear receptor subfamily 1 group H member 4 involved_in IEA Ensembl GO_REF:0000107 NCBI chr12:98,052,778...98,144,085
Ensembl chr12:101,457,885...101,548,058 		JBrowse link
regulation of nitrogen utilization term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G BAX BCL2 associated X, apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9241272) Ensembl
MGI		 PMID:9241272 GO_REF:0000107 NCBI chr19:45,955,926...45,962,870
Ensembl chr19:54,793,594...54,800,468 		JBrowse link
G BCL2 BCL2 apoptosis regulator involved_in
acts_upstream_of_or_within		 IEA
ISO		 (PMID:9241272) Ensembl
MGI		 PMID:9241272 GO_REF:0000107 NCBI chr18:56,481,212...56,679,012
Ensembl chr18:59,802,443...59,992,100 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 16313
    response to stimulus 8459
      response to external stimulus 2938
        response to extracellular stimulus 800
          response to nutrient levels 775
            nitrogen utilization 5
              ammonia assimilation cycle + 2
              negative regulation of nitrogen utilization + 0
              positive regulation of nitrogen utilization + 1
              regulation of nitrogen utilization + 3
paths to the root