ONTOLOGY REPORT - ANNOTATIONS

Term:virus-host interaction
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Accession:GO:0019048 term browser browse the term
Definition:Interactions, directly with the host cell macromolecular machinery, to allow virus replication.
Synonyms:exact_synonym: viral interaction with host
 xref_analog: Reactome:REACT_6323;   VZ:886

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virus-host interaction term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Dag1 dystroglycan 1 (dystrophin-associated glycoprotein 1) GBrowse link ISO 8 113,470,871 113,483,433 RGD:1624291 RGD
G Dag1 dystroglycan 1 (dystrophin-associated glycoprotein 1) GBrowse link IEA 8 113,470,871 113,483,433 RGD:1600115 ENSEMBL
G F11r F11 receptor GBrowse link IEA 13 87,369,918 87,393,508 RGD:1600115 UniProtKB
G Nlrx1 NLR family member X1 GBrowse link IEA 8 47,230,800 47,246,976 RGD:1600115 UniProtKB
G Pdcl3 phosducin-like 3 GBrowse link IEA 9 38,004,222 38,012,693 RGD:1600115 UniProtKB
G Rraga Ras-related GTP binding A GBrowse link ISO 5 105,659,659 105,661,254 RGD:1624291 RGD
G Rraga Ras-related GTP binding A GBrowse link ISS 5 105,659,659 105,661,254 RGD:1600115 UniProtKB
G Rxra retinoid X receptor alpha GBrowse link ISO 3 6,605,782 6,689,224 RGD:1624291 RGD
G Rxra retinoid X receptor alpha GBrowse link IEA 3 6,605,782 6,689,224 RGD:1600115 ENSEMBL
G Slc20a2 solute carrier family 20 (phosphate transporter), member 2 GBrowse link IEA 16 73,948,917 74,174,391 RGD:1600115 UniProtKB
G Vapb VAMP (vesicle-associated membrane protein)-associated protein B and C GBrowse link ISO 3 164,632,388 164,669,187 RGD:1624291 RGD
G Vapb VAMP (vesicle-associated membrane protein)-associated protein B and C GBrowse link ISS 3 164,632,388 164,669,187 RGD:1600115 UniProtKB
G Vcam1 vascular cell adhesion molecule 1 GBrowse link IEA 2 212,277,654 212,297,376 RGD:1600115 UniProtKB
cellular process regulating host cell cycle in response to virus term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bad BCL2-associated agonist of cell death GBrowse link ISO 1 209,617,373 209,626,292 RGD:1624291 RGD
G Bad BCL2-associated agonist of cell death GBrowse link IEA 1 209,617,373 209,626,292 RGD:1600115 ENSEMBL
G Bcl2l1 Bcl2-like 1 GBrowse link ISO 3 143,129,087 143,180,199 RGD:1624291 RGD
G Bcl2l1-ps1 Bcl2-like 1, pseudogene 1 GBrowse link IEA 1 160,254,067 160,254,579 RGD:1600115 ENSEMBL
G Bcl2l11 BCL2-like 11 (apoptosis facilitator) GBrowse link ISO 3 115,692,323 115,722,701 RGD:1624291 RGD
establishment of viral latency term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Creb3 cAMP responsive element binding protein 3 GBrowse link ISO 5 60,040,874 60,045,512 RGD:1624291 RGD
evasion or tolerance of host defenses by virus term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Smad3 SMAD family member 3 GBrowse link ISO 8 67,803,909 67,952,056 RGD:1624291 RGD
G Smad3 SMAD family member 3 GBrowse link IEA 8 67,803,909 67,952,056 RGD:1600115 ENSEMBL
G Tgfb1 transforming growth factor, beta 1 GBrowse link ISO 1 80,894,705 80,911,020 RGD:1624291 RGD
G Tgfb1 transforming growth factor, beta 1 GBrowse link ISS 1 80,894,705 80,911,020 RGD:1600115 UniProtKB
immortalization of host cell by virus term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Tyms thymidylate synthetase GBrowse link IEP 9 112,604,912 112,617,706 RGD:2317429 RGD
induction by virus of host cell-cell fusion term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cd4 Cd4 molecule GBrowse link ISO 4 160,988,512 161,014,038 RGD:1624291 RGD
G Cd4 Cd4 molecule GBrowse link IEA 4 160,988,512 161,014,038 RGD:1600115 ENSEMBL
intracellular transport of viral proteins in host cell term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Dynlt1 dynein light chain Tctex-type 1 GBrowse link ISO 1 41,097,174 41,103,997 RGD:1624291 RGD
G Dynlt1 dynein light chain Tctex-type 1 GBrowse link IEA 1 41,097,174 41,103,997 RGD:1600115 ENSEMBL
G Ifit1 interferon-induced protein with tetratricopeptide repeats 1 GBrowse link ISO 1 238,609,171 238,611,236 RGD:1624291 RGD
G Tap1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) GBrowse link ISO 20 4,790,363 4,800,730 RGD:1624291 RGD
G Tap1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) GBrowse link IEA 20 4,790,363 4,800,730 RGD:1600115 ENSEMBL
G Tap2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) GBrowse link ISO 20 4,770,446 4,784,488 RGD:1624291 RGD
intronless viral mRNA export from host nucleus term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B GBrowse link ISO 20 3,611,128 3,623,578 RGD:1624291 RGD
G Ddx39b DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B GBrowse link IEA 20 3,611,128 3,623,578 RGD:1600115 ENSEMBL
G Thoc2 THO complex 2 GBrowse link ISO X 3,196,205 3,310,749 RGD:1624291 RGD
G Thoc3 THO complex 3 GBrowse link IEA 17 16,233,851 16,243,042 RGD:1600115 ENSEMBL
G Thoc3 THO complex 3 GBrowse link ISO 17 16,233,851 16,243,042 RGD:1624291 RGD
G Thoc4 THO complex 4 GBrowse link IEA 10 109,984,500 109,988,263 RGD:1600115 ENSEMBL
G Thoc5 THO complex 5 GBrowse link ISO 14 85,561,381 85,612,915 RGD:1624291 RGD
G Thoc5 THO complex 5 GBrowse link IEA 14 85,561,381 85,612,915 RGD:1600115 ENSEMBL
G Thoc6 THO complex 6 homolog (Drosophila) GBrowse link ISO 10 12,933,304 12,938,664 RGD:1624291 RGD
G Thoc6 THO complex 6 homolog (Drosophila) GBrowse link IEA 10 12,933,304 12,938,664 RGD:1600115 ENSEMBL
G Thoc7 THO complex 7 homolog (Drosophila) GBrowse link ISO 15 12,821,300 12,827,567 RGD:1624291 RGD
G Thoc7 THO complex 7 homolog (Drosophila) GBrowse link IEA 15 12,821,300 12,827,567 RGD:1600115 ENSEMBL
modulation by virus of host transcription term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ntrk3 neurotrophic tyrosine kinase, receptor, type 3 GBrowse link IEP 1 133,925,530 134,302,139 RGD:2325644 RGD
negative regulation of egress of virus within host cell term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISO 16 18,698,545 18,701,768 RGD:1624291 RGD
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISO 16 18,698,545 18,701,768 RGD:1624291 RGD
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISO 16 18,698,545 18,701,768 RGD:1624291 RGD
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISO 16 18,698,545 18,701,768 RGD:1624291 RGD
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISO 16 18,698,545 18,701,768 RGD:1624291 RGD
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISO 16 18,698,545 18,701,768 RGD:1624291 RGD
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISS 16 18,698,545 18,701,768 RGD:1600115 UniProtKB
G Bst2 bone marrow stromal cell antigen 2 GBrowse link ISS 16 18,698,545 18,701,768 RGD:1600115 UniProtKB
negative regulation of viral entry into host cell term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ifitm1 interferon induced transmembrane protein 1 GBrowse link ISO 1 201,154,494 201,155,509 RGD:1624291 RGD
G Ifitm1 interferon induced transmembrane protein 1 GBrowse link ISO 1 201,154,494 201,155,509 RGD:1624291 RGD
G Ifitm2 interferon induced transmembrane protein 2 GBrowse link ISO 1 201,134,357 201,135,537 RGD:1624291 RGD
G Ifitm2 interferon induced transmembrane protein 2 GBrowse link ISO 1 201,134,357 201,135,537 RGD:1624291 RGD
G Ifitm3 interferon induced transmembrane protein 3 GBrowse link ISO 1 201,198,659 201,199,768 RGD:1624291 RGD
positive regulation of apoptotic process by virus term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ccr5 chemokine (C-C motif) receptor 5 GBrowse link IMP 8 128,907,157 128,912,272 RGD:4890424 RGD
regulation of viral entry into host cell term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Hs3st5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 GBrowse link IEA 20 40,711,763 41,022,773 RGD:1600115 ENSEMBL
G Hs3st5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 GBrowse link ISO 20 40,711,763 41,022,773 RGD:1624291 RGD
release from viral latency term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Creb3 cAMP responsive element binding protein 3 GBrowse link ISO 5 60,040,874 60,045,512 RGD:1624291 RGD
G Hcfc1 host cell factor C1 GBrowse link IEA X 159,875,671 159,900,536 RGD:1600115 ENSEMBL
G Hcfc1 host cell factor C1 GBrowse link ISO X 159,875,671 159,900,536 RGD:1624291 RGD
transformation of host cell by virus term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Hyal2 hyaluronoglucosaminidase 2 GBrowse link ISO 8 112,817,001 112,820,693 RGD:1624291 RGD
G Hyal2 hyaluronoglucosaminidase 2 GBrowse link IDA 8 112,817,001 112,820,693 RGD:633153 RGD
G Insr insulin receptor GBrowse link ISO 12 2,934,967 3,087,691 RGD:1624291 RGD
G Insr insulin receptor GBrowse link IEA 12 2,934,967 3,087,691 RGD:1600115 ENSEMBL
G Mmp9 matrix metallopeptidase 9 GBrowse link IDA 3 155,985,473 155,993,433 RGD:2325807 RGD
G Myc myelocytomatosis oncogene GBrowse link IMP 7 98,953,142 98,958,060 RGD:7207780 RGD
viral entry into host cell term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Gas6 growth arrest specific 6 GBrowse link ISO 16 80,900,159 80,930,929 RGD:1624291 RGD
G Gas6 growth arrest specific 6 GBrowse link ISS 16 80,900,159 80,930,929 RGD:1600115 UniProtKB
G Hyal2 hyaluronoglucosaminidase 2 GBrowse link IDA 8 112,817,001 112,820,693 RGD:633153 RGD
G Pvrl1 poliovirus receptor-related 1 GBrowse link IMP 8 46,739,657 46,799,051 RGD:1599797 RGD
G Zfp639 zinc finger protein 639 GBrowse link ISO 2 118,718,400 118,725,490 RGD:1624291 RGD
G Zfp639 zinc finger protein 639 GBrowse link ISS 2 118,718,400 118,725,490 RGD:1600115 UniProtKB
viral entry into host cell via membrane fusion with the plasma membrane term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Gas6 growth arrest specific 6 GBrowse link ISO 16 80,900,159 80,930,929 RGD:1624291 RGD
G Gas6 growth arrest specific 6 GBrowse link ISS 16 80,900,159 80,930,929 RGD:1600115 UniProtKB
G Hyal2 hyaluronoglucosaminidase 2 GBrowse link IEA 8 112,817,001 112,820,693 RGD:1600115 ENSEMBL
G Hyal2 hyaluronoglucosaminidase 2 GBrowse link ISO 8 112,817,001 112,820,693 RGD:1624291 RGD
G Hyal2 hyaluronoglucosaminidase 2 GBrowse link ISS 8 112,817,001 112,820,693 RGD:1600115 UniProtKB
G Pvrl2 poliovirus receptor-related 2 GBrowse link ISO 1 79,021,831 79,059,686 RGD:1624291 RGD
G Pvrl2 poliovirus receptor-related 2 GBrowse link IEA 1 79,021,831 79,059,686 RGD:1600115 ENSEMBL
virion attachment, binding of host cell surface coreceptor term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Pvrl2 poliovirus receptor-related 2 GBrowse link ISO 1 79,021,831 79,059,686 RGD:1624291 RGD
G Pvrl2 poliovirus receptor-related 2 GBrowse link IEA 1 79,021,831 79,059,686 RGD:1600115 ENSEMBL
virion attachment, binding of host cell surface receptor term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 GBrowse link ISO X 51,051,758 51,096,036 RGD:1624291 RGD
G Ace2 angiotensin I converting enzyme (peptidyl-dipeptidase A) 2 GBrowse link IEA X 51,051,758 51,096,036 RGD:1600115 ENSEMBL
G Gas6 growth arrest specific 6 GBrowse link ISO 16 80,900,159 80,930,929 RGD:1624291 RGD
G Gas6 growth arrest specific 6 GBrowse link ISS 16 80,900,159 80,930,929 RGD:1600115 UniProtKB
G Icam1 intercellular adhesion molecule 1 GBrowse link ISO 8 20,040,177 20,051,939 RGD:1624291 RGD
G Icam1 intercellular adhesion molecule 1 GBrowse link IEA 8 20,040,177 20,051,939 RGD:1600115 ENSEMBL
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 135981
    multi-organism process 2326
      interspecies interaction between organisms 238
        interaction with host 112
          virus-host interaction 91
            catabolism by virus of host DNA 0
            cleavage by virus of host mRNA 0
            establishment of viral latency + 1
            evasion or tolerance of host defenses by virus + 4
            induction by virus of host cell-cell fusion + 2
            induction of host immune response by virus + 0
            intracellular transport of viral material + 20
            killing by virus of host cells + 0
            maintenance of viral latency 0
            modulation by virus of host cellular process + 6
            modulation by virus of host molecular function + 0
            positive regulation of apoptotic process by virus + 1
            regulation of viral protein levels in host cell + 6
            release from viral latency 3
            spread of virus in multicellular host + 0
            transformation of host cell by virus + 7
            viral attachment to host cell + 8
            viral entry into host cell + 20
            viral latency + 4
            viral penetration into host nucleus + 0
            virion transport + 0
Path 2
Term Annotations click to browse term
  biological_process 135981
    cellular process 85166
      multi-organism cellular process 297
        viral reproduction 295
          viral reproductive process 252
            virus-host interaction 91
              catabolism by virus of host DNA 0
              cleavage by virus of host mRNA 0
              establishment of viral latency + 1
              evasion or tolerance of host defenses by virus + 4
              induction by virus of host cell-cell fusion + 2
              induction of host immune response by virus + 0
              intracellular transport of viral material + 20
              killing by virus of host cells + 0
              maintenance of viral latency 0
              modulation by virus of host cellular process + 6
              modulation by virus of host molecular function + 0
              positive regulation of apoptotic process by virus + 1
              regulation of viral protein levels in host cell + 6
              release from viral latency 3
              spread of virus in multicellular host + 0
              transformation of host cell by virus + 7
              viral attachment to host cell + 8
              viral entry into host cell + 20
              viral latency + 4
              viral penetration into host nucleus + 0
              virion transport + 0
paths to the root

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