protein-chromophore linkage - Ontology Report

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Keyword

ONTOLOGY REPORT - ANNOTATIONS

Term:	protein-chromophore linkage	go back to main search page
Accession:	GO:0018298	browse the term
Definition:	The covalent or noncovalent attachment of a chromophore to a protein.

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protein-chromophore linkage
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ambp	alpha-1-microglobulin/bikunin precursor		IEA	5	80,119,742	80,129,962	RGD:1600115	UniProtKB
G	Cry1	cryptochrome 1 (photolyase-like)		IEA	7	20,643,879	20,709,216	RGD:1600115	UniProtKB
G	Cry2	cryptochrome 2 (photolyase-like)		IEA	3	76,802,782	76,830,902	RGD:1600115	UniProtKB
G	Opn1mw	opsin 1 (cone pigments), medium-wave-sensitive		IEA	X	160,095,742	160,115,966	RGD:1600115	UniProtKB
G	Opn1sw	opsin 1 (cone pigments), short-wave-sensitive		IEA	4	56,256,846	56,259,986	RGD:1600115	UniProtKB
G	Opn3	opsin 3		IEA	13	91,396,311	91,427,005	RGD:1600115	UniProtKB
G	Opn4	opsin 4		IEA	16	10,249,756	10,258,923	RGD:1600115	UniProtKB
G	Opn5	opsin 5		IEA	9	14,124,601	14,171,851	RGD:1600115	UniProtKB
G	Rho	rhodopsin		IEA	4	152,057,788	152,062,950	RGD:1600115	UniProtKB
G	Rrh	retinal pigment epithelium derived rhodopsin homolog		IEA	2	227,256,627	227,266,897	RGD:1600115	UniProtKB

Term paths to the root

Path 1
Term	Annotations
biological_process	136531
metabolic process	36512
cellular metabolic process	30527
cellular macromolecule metabolic process	21896
cellular protein metabolic process	8800
cellular protein modification process	6858
protein-chromophore linkage	10
peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine	0
peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine	0
peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine	0
peptide cross-linking via 2-tetrahydropyridinyl-5-imidazolinone glycine	0
peptide cross-linking via 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one	0
peptide cross-linking via L-asparagine 5-imidazolinone glycine	0
peptide cross-linking via L-lysine 5-imidazolinone glycine	0
peptide cross-linking via L-seryl-5-imidazolinone glycine	0
protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine	0
protein-chromophore linkage via peptidyl-N6-retinal-L-lysine	0
protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine	0
protein-chromophore linkage via peptidyl-cysteine +	0
Path 2
Term	Annotations
biological_process	136531
metabolic process	36512
organic substance metabolic process	32846
macromolecule metabolic process	25254
protein metabolic process	10760
protein modification process	6858
cellular protein modification process	6858
protein-chromophore linkage	10
peptide cross-linking via 2-imino-glutamic acid 5-imidazolinone glycine	0
peptide cross-linking via 2-imino-glutaminyl-5-imidazolinone glycine	0
peptide cross-linking via 2-imino-methionine 5-imidazolinone glycine	0
peptide cross-linking via 2-tetrahydropyridinyl-5-imidazolinone glycine	0
peptide cross-linking via 3-(2-methylthio)ethyl-6-(4-hydroxybenzylidene)-5-iminopiperazin-2-one	0
peptide cross-linking via L-asparagine 5-imidazolinone glycine	0
peptide cross-linking via L-lysine 5-imidazolinone glycine	0
peptide cross-linking via L-seryl-5-imidazolinone glycine	0
protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine	0
protein-chromophore linkage via peptidyl-N6-retinal-L-lysine	0
protein-chromophore linkage via peptidyl-S-4-hydroxycinnamyl-L-cysteine	0
protein-chromophore linkage via peptidyl-cysteine +	0