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ONTOLOGY REPORT - ANNOTATIONS

Term:structural constituent of nuclear pore
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Accession:GO:0017056 term browser browse the term
Definition:The action of a molecule that contributes to the structural integrity of the nuclear pore complex, a protein-lined channel in the nuclear envelope that allows the transfer of macromolecules.
Comment:Note that this term is meant to be used for nuclear pore proteins. For importins and exportins, consider 'nuclear import signal receptor activity' or 'nuclear export signal receptor activity', respectively.
Synonyms:exact_synonym: nucleocytoplasmic transporter activity
 related_synonym: nuclear pore activity
 alt_id: GO:0005487
 xref: Reactome:R-HSA-5661474 "Defective NPC does not transport GCK1:GKRP from cytosol to nucleoplasm";   reactome:R-HSA-1176059 "Translocation of Influenza A virus nonstructural protein 1 (NS1A) into the nucleus";   reactome:R-HSA-170796 "NPC transports GCK1:GKRP from cytosol to nucleoplasm";   reactome:R-HSA-192627 "Viral mRNA Export";   reactome:R-HSA-192925 "Export of Spliced Viral mRNA";   reactome:R-HSA-5252041 "NPC transports Hikeshi:HSP70s:ATP from cytosol to nucleoplasm";   reactome:R-HSA-5578744 "Importin-8 imports AGO2:miRNA into the nucleus";   reactome:R-HSA-6783483 "tRNA:XPOT:RAN:GTP translocates from the nucleus to the cytosol"


show annotations for term's descendants           Sort by:
structural constituent of nuclear pore term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ndc1 NDC1 transmembrane nucleoporin enables ISO
IEA		 (PMID:16600873)
GO_REF:0000107		 RGD
Ensembl		 PMID:16600873 GO_REF:0000107 NCBI chr 5:122,155,992...122,202,295
Ensembl chr 5:122,155,967...122,202,291 		JBrowse link
G Nup107 nucleoporin 107 enables ISS
ISO
IEA
IBA		 PMID:11684705
GO_REF:0000024
(PMID:11684705), (PMID:15229283)
GO_REF:0000104
GO_REF:0000033		 UniProt
RGD
GO_Central		 PMID:11684705 PMID:15229283 PMID:11684705 GO_REF:0000024 GO_REF:0000033 GO_REF:0000104, RGD:8553287 NCBI chr 7:53,353,740...53,398,345
Ensembl chr 7:53,353,743...53,398,370 		JBrowse link
G Nup133 nucleoporin 133 enables ISO
IBA		 (PMID:11684705)
GO_REF:0000033		 RGD
GO_Central		 PMID:11684705 GO_REF:0000033 NCBI chr19:51,891,606...51,941,243
Ensembl chr19:51,891,629...51,941,239 		JBrowse link
G Nup153 nucleoporin 153 enables ISO
ISS
IEA
IBA		 (PMID:15229283), (PMID:22253824)
GO_REF:0000024
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033		 RGD
UniProt
Ensembl
TreeGrafter
GO_Central		 PMID:15229283 PMID:22253824 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr17:17,972,217...18,024,876
Ensembl chr17:17,972,217...18,024,876 		JBrowse link
G Nup155 nucleoporin 155 enables IEA
IBA		 GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 InterPro
GO_Central
TreeGrafter		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 2:57,201,310...57,252,918
Ensembl chr 2:57,201,272...57,254,148 		JBrowse link
G Nup160 nucleoporin 160 enables ISO
IBA		 (PMID:11684705)
(MGI:3690169|PMID:11684705)
GO_REF:0000033		 RGD
GO_Central		 PMID:11684705 GO_REF:0000033 MGI:3690169 NCBI chr 3:76,665,786...76,729,296
Ensembl chr 3:76,665,786...76,724,565 		JBrowse link
G Nup188 nucleoporin 188 enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 3:13,559,917...13,616,313
Ensembl chr 3:13,559,990...13,616,307 		JBrowse link
G Nup205 nucleoporin 205 enables ISO
IBA		 (PMID:15229283)
GO_REF:0000033		 RGD
GO_Central		 PMID:15229283 GO_REF:0000033 NCBI chr 4:63,854,934...63,920,852
Ensembl chr 4:63,854,783...63,920,844 		JBrowse link
G Nup210 nucleoporin 210 NAS RGD PMID:11453980 RGD:724456 NCBI chr 4:123,511,558...123,609,874
Ensembl chr 4:123,511,559...123,609,874 		JBrowse link
G Nup214 nucleoporin 214 enables ISO MGI:2441651 (PMID:8896451) RGD PMID:8896451 NCBI chr 3:15,255,111...15,340,568
Ensembl chr 3:15,255,119...15,340,568 		JBrowse link
G Nup35 nucleoporin 35 enables IEA
IBA		 GO_REF:0000002
GO_REF:0000118
GO_REF:0000033		 InterPro
TreeGrafter
GO_Central		 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:65,555,203...65,594,488
Ensembl chr 3:65,558,968...65,585,130 		JBrowse link
G Nup54 nucleoporin 54 enables IDA
IPI
IBA
IEA		 PMID:8707840
PMID:8589458
GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 PMID:8707840 PMID:8589458 GO_REF:0000033 GO_REF:0000118, RGD:633404, RGD:8553994 NCBI chr14:15,617,630...15,636,029
Ensembl chr14:15,617,679...15,636,028 		JBrowse link
G Nup58 nucleoporin 58 enables IDA
IEA
IBA		 PMID:8707840
GO_REF:0000002
PMID:8589458
GO_REF:0000118
GO_REF:0000033		 InterPro
TreeGrafter
GO_Central		 PMID:8707840 PMID:8589458 GO_REF:0000002 GO_REF:0000033 GO_REF:0000118, RGD:633404, RGD:8553994 NCBI chr15:34,358,170...34,407,160
Ensembl chr15:34,358,277...34,407,060 		JBrowse link
G Nup62 nucleoporin 62 enables IDA
IBA		 PMID:8589458
GO_REF:0000033		 GO_Central PMID:8589458 GO_REF:0000033, RGD:8553994 NCBI chr 1:95,298,995...95,314,902
Ensembl chr 1:95,295,526...95,315,174 		JBrowse link
G Nup62cl nucleoporin 62 C-terminal like enables IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr  X:103,668,458...103,724,957
Ensembl chr  X:103,668,455...103,724,081 		JBrowse link
G Nup85 nucleoporin 85 enables IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr10:100,806,482...100,825,029
Ensembl chr10:100,806,437...100,825,043 		JBrowse link
G Nup88 nucleoporin 88 enables IEA GO_REF:0000002 InterPro GO_REF:0000002 NCBI chr10:55,667,903...55,692,249
Ensembl chr10:55,667,906...55,692,257 		JBrowse link
G Nup93 nucleoporin 93 enables ISO
ISS
IEA
IBA		 (PMID:15229283)
GO_REF:0000024
GO_REF:0000002
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033		 RGD
UniProt
InterPro
Ensembl
TreeGrafter
GO_Central		 PMID:15229283 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr19:10,684,214...10,788,009
Ensembl chr19:10,682,075...10,788,026 		JBrowse link
G Nup98 nucleoporin 98 and 96 precursor enables ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:15229283)
GO_REF:0000002
GO_REF:0000033
GO_REF:0000118		 UniProt
RGD
InterPro
GO_Central
TreeGrafter		 PMID:15229283 GO_REF:0000002 GO_REF:0000024 GO_REF:0000033 GO_REF:0000118 NCBI chr 1:156,494,423...156,591,415
Ensembl chr 1:156,494,423...156,591,415 		JBrowse link
G Nutf2 nuclear transport factor 2 enables ISO (PMID:10679025), (PMID:7744965) RGD PMID:7744965 PMID:10679025 NCBI chr19:33,752,319...33,773,595
Ensembl chr19:33,752,291...33,773,591 		JBrowse link
G Pom121 POM121 transmembrane nucleoporin enables IDA
IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central
RGD		 PMID:8335683 GO_REF:0000033 GO_REF:0000118, RGD:729484 NCBI chr12:21,273,713...21,294,299
Ensembl chr12:21,276,913...21,294,294 		JBrowse link
G Pom121l2 POM121 transmembrane nucleoporin-like 2 enables IEA GO_REF:0000118 TreeGrafter GO_REF:0000118 NCBI chr17:42,546,144...42,553,447
Ensembl chr17:42,546,326...42,553,423 		JBrowse link
G Tpr translocated promoter region, nuclear basket protein enables ISS
ISO
IEA
IBA		 GO_REF:0000024
(PMID:22253824)
GO_REF:0000107
GO_REF:0000118
GO_REF:0000033		 UniProt
RGD
Ensembl
TreeGrafter
GO_Central		 PMID:22253824 GO_REF:0000024 GO_REF:0000033 GO_REF:0000107 GO_REF:0000118 NCBI chr13:62,424,312...62,487,502
Ensembl chr13:62,424,312...62,487,496 		JBrowse link
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  molecular_function 20890
    structural molecule activity 1112
      structural constituent of nuclear pore 23
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