ONTOLOGY REPORT - ANNOTATIONS


Term:nucleoid
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Accession:GO:0009295 term browser browse the term
Definition:The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined.
Synonyms:xref_analog: Wikipedia:Nucleoid


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mitochondrial nucleoid term browser
Symbol Object Name JBrowse Chr Start Stop Reference
G Acadvl acyl-CoA dehydrogenase, very long chain JBrowse link 10 56,619,321 56,624,468 RGD:1624291
RGD:1600115
G Atad3a ATPase family, AAA domain containing 3A JBrowse link 5 173,189,590 173,209,809 RGD:1600115
G Atp5f1b ATP synthase F1 subunit beta JBrowse link 7 2,504,708 2,511,748 RGD:1624291
RGD:1600115
G Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit JBrowse link 8 70,789,137 70,843,133 RGD:1624291
G Cps1 carbamoyl-phosphate synthase 1 JBrowse link 9 74,113,437 74,236,274 RGD:1624291
G Dbt dihydrolipoamide branched chain transacylase E2 JBrowse link 2 219,563,783 219,592,651 RGD:1624291
G Ddx28 DEAD-box helicase 28 JBrowse link 19 37,988,423 37,990,353 RGD:1624291
G Dhx30 DExH-box helicase 30 JBrowse link 8 118,160,315 118,194,674 RGD:1624291
RGD:1600115
G Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 JBrowse link 10 11,059,701 11,085,186 RGD:1624291
G Elac2 elaC ribonuclease Z 2 JBrowse link 10 51,478,378 51,501,167 RGD:1624291
RGD:1600115
G Fastkd2 FAST kinase domains 2 JBrowse link 9 70,448,386 70,471,420 RGD:1624291
RGD:1600115
G Fastkd5 FAST kinase domains 5 JBrowse link 3 123,154,263 123,170,615 RGD:1624291
G Grsf1 G-rich RNA sequence binding factor 1 JBrowse link 14 21,039,990 21,056,413 RGD:1624291
G Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha JBrowse link 6 27,589,840 27,628,921 RGD:1624291
G Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta JBrowse link 6 27,555,408 27,589,539 RGD:1624291
RGD:1600115
G Hsd17b10 hydroxysteroid (17-beta) dehydrogenase 10 JBrowse link X 21,696,796 21,699,241 RGD:1624291
G Hspa9 heat shock protein family A member 9 JBrowse link 18 27,731,072 27,749,235 RGD:1624291
RGD:1600115
G Lonp1 lon peptidase 1, mitochondrial JBrowse link 9 10,428,853 10,441,180 RGD:1624291
G Lrpprc leucine-rich pentatricopeptide repeat containing JBrowse link 6 7,984,043 8,066,874 RGD:1624291
RGD:1600115
G Lrrc59 leucine rich repeat containing 59 JBrowse link 10 82,352,390 82,367,047 RGD:1624291
G Mpg N-methylpurine-DNA glycosylase JBrowse link 10 15,661,768 15,667,995 RGD:1600115
G Mterf1 mitochondrial transcription termination factor 1 JBrowse link 4 27,365,310 27,372,374 RGD:1624291
G Mterf2 mitochondrial transcription termination factor 2 JBrowse link 7 24,638,208 24,649,599 RGD:1600115
RGD:1624291
G Poldip2 DNA polymerase delta interacting protein 2 JBrowse link 10 65,781,994 65,790,833 RGD:1624291
G Polg DNA polymerase gamma, catalytic subunit JBrowse link 1 141,172,117 141,188,893 RGD:1624291
RGD:1600115
G Polg2 DNA polymerase gamma 2, accessory subunit JBrowse link 10 94,968,836 94,979,259 RGD:1624291
G Polrmt RNA polymerase mitochondrial JBrowse link 7 12,840,907 12,851,153 RGD:1624291
G RGD1305089 similar to 1110008L16Rik protein JBrowse link 6 76,079,880 76,171,298 RGD:1624291
G Shmt2 serine hydroxymethyltransferase 2 JBrowse link 7 70,824,718 70,829,822 RGD:1624291
G Slc25a16 solute carrier family 25 member 16 JBrowse link 20 27,283,383 27,308,069 RGD:1600115
G Slc25a5 solute carrier family 25 member 5 JBrowse link X 123,404,570 123,407,637 RGD:1624291
G Sod2 superoxide dismutase 2 JBrowse link 1 47,914,757 47,921,587 RGD:2306615
G Ssbp1 single stranded DNA binding protein 1 JBrowse link 4 68,634,844 68,645,112 RGD:1624291
RGD:1600115
G Supv3l1 Suv3 like RNA helicase JBrowse link 20 32,057,530 32,080,170 RGD:1624291
RGD:1600115
G Tefm transcription elongation factor, mitochondrial JBrowse link 10 67,476,006 67,478,830 RGD:1624291
RGD:1600115
G Tert telomerase reverse transcriptase JBrowse link 1 32,250,876 32,275,330 RGD:1624291
G Tfam transcription factor A, mitochondrial JBrowse link 20 18,594,057 18,606,106 RGD:1624291
RGD:1600115
G Tfb1m transcription factor B1, mitochondrial JBrowse link 1 44,433,116 44,474,674 RGD:1624291
RGD:1600115
G Tfb2m transcription factor B2, mitochondrial JBrowse link 13 97,820,493 97,838,275 RGD:1624291
G Top1mt DNA topoisomerase I mitochondrial JBrowse link 7 116,688,801 116,714,421 RGD:1624291
RGD:1600115
G Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit JBrowse link 11 47,047,342 47,052,420 RGD:1600115
G Tufm Tu translation elongation factor, mitochondrial JBrowse link 1 197,903,582 197,907,189 RGD:1624291
G Twnk twinkle mtDNA helicase JBrowse link 1 264,756,060 264,762,892 RGD:1624291
G Uqcc2 ubiquinol-cytochrome c reductase complex assembly factor 2 JBrowse link 20 5,712,200 5,723,902 RGD:1624291
RGD:1600115
G Vdac1 voltage-dependent anion channel 1 JBrowse link 10 37,724,915 37,752,827 RGD:1624291
G Vdac2 voltage-dependent anion channel 2 JBrowse link 15 2,634,622 2,648,548 RGD:1624291

Term paths to the root
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Term Annotations click to browse term
  cellular_component 18315
    nucleoid 46
      bacterial nucleoid + 0
      mitochondrial nucleoid + 46
      plastid nucleoid + 0
      single-stranded DNA-binding protein complex 0
      virion nucleoid 0
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