ONTOLOGY REPORT - ANNOTATIONS

Term:pyrimidine ribonucleoside triphosphate biosynthetic process
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Accession:GO:0009209 term browser browse the term
Definition:The chemical reactions and pathways resulting in the formation of pyrimidine ribonucleoside triphosphate, a compound consisting of a pyrimidine base linked to a ribose sugar esterified with triphosphate on the sugar.
Synonyms:exact_synonym: pyrimidine ribonucleoside triphosphate anabolism;   pyrimidine ribonucleoside triphosphate biosynthesis;   pyrimidine ribonucleoside triphosphate formation;   pyrimidine ribonucleoside triphosphate synthesis

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'de novo' CTP biosynthetic process term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ctps2 CTP synthase 2 GBrowse link IEA X 52,387,522 52,541,409 RGD:1600115 UniPathway
CTP biosynthetic process term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ctps CTP synthase GBrowse link ISO 5 141,136,686 141,165,817 RGD:1624291 RGD
G Ctps CTP synthase GBrowse link IEA 5 141,136,686 141,165,817 RGD:1600115 ENSEMBL
G LOC688903 similar to Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-M5) GBrowse link IEA 18 27,033,366 27,049,707 RGD:1600115 InterPro
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 GBrowse link IEA 10 82,591,705 82,601,075 RGD:1600115 InterPro
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 GBrowse link IDA 10 82,582,766 82,588,269 RGD:729254 RGD
G Nme2-ps1 non-metastatic cells 2, protein (NM23B) expressed in, pseudogene 1 GBrowse link IEA 20 11,570,131 11,570,562 RGD:1600115 InterPro
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 GBrowse link IEA 10 14,145,488 14,146,444 RGD:1600115 InterPro
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 GBrowse link IEA 10 15,360,310 15,364,165 RGD:1600115 InterPro
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 GBrowse link IEA 8 114,205,773 114,212,486 RGD:1600115 InterPro
G Nme7 NME/NM23 family member 7 GBrowse link IEA 13 80,073,815 80,214,238 RGD:1600115 InterPro
G Nme8 NME/NM23 family member 8 GBrowse link IEA 17 53,037,090 53,105,985 RGD:1600115 InterPro
G Rp2 retinitis pigmentosa 2 homolog (human) IEA RGD:1600115 InterPro
CTP salvage term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Uck1 uridine-cytidine kinase 1 GBrowse link IEA 3 11,366,634 11,372,517 RGD:1600115 UniPathway
G Uck2 uridine-cytidine kinase 2 GBrowse link IEA 13 82,892,893 82,949,575 RGD:1600115 UniPathway
G Uckl1 uridine-cytidine kinase 1-like 1 GBrowse link IEA 3 170,707,803 170,720,880 RGD:1600115 UniPathway
UTP biosynthetic process term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase GBrowse link IDA 6 25,272,416 25,296,266 RGD:2303528 RGD
G LOC688903 similar to Nucleoside diphosphate kinase homolog 5 (NDK-H 5) (NDP kinase homolog 5) (nm23-M5) GBrowse link IEA 18 27,033,366 27,049,707 RGD:1600115 InterPro
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 GBrowse link IEA 10 82,591,705 82,601,075 RGD:1600115 InterPro
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 GBrowse link IDA 10 82,582,766 82,588,269 RGD:729254 RGD
G Nme2-ps1 non-metastatic cells 2, protein (NM23B) expressed in, pseudogene 1 GBrowse link IEA 20 11,570,131 11,570,562 RGD:1600115 InterPro
G Nme3 NME/NM23 nucleoside diphosphate kinase 3 GBrowse link IEA 10 14,145,488 14,146,444 RGD:1600115 InterPro
G Nme4 NME/NM23 nucleoside diphosphate kinase 4 GBrowse link IEA 10 15,360,310 15,364,165 RGD:1600115 InterPro
G Nme6 NME/NM23 nucleoside diphosphate kinase 6 GBrowse link IEA 8 114,205,773 114,212,486 RGD:1600115 InterPro
G Nme7 NME/NM23 family member 7 GBrowse link IEA 13 80,073,815 80,214,238 RGD:1600115 InterPro
G Nme8 NME/NM23 family member 8 GBrowse link IEA 17 53,037,090 53,105,985 RGD:1600115 InterPro
G Rp2 retinitis pigmentosa 2 homolog (human) IEA RGD:1600115 InterPro
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 135967
    metabolic process 36390
      organic substance metabolic process 32723
        organophosphate metabolic process 2317
          nucleoside phosphate metabolic process 1630
            nucleoside triphosphate metabolic process 754
              nucleoside triphosphate biosynthetic process 104
                pyrimidine nucleoside triphosphate biosynthetic process 31
                  pyrimidine ribonucleoside triphosphate biosynthetic process 27
                    CTP biosynthetic process + 16
                    TTP biosynthetic process 0
                    UTP biosynthetic process 11
Path 2
Term Annotations click to browse term
  biological_process 135967
    metabolic process 36390
      cellular metabolic process 30423
        cellular aromatic compound metabolic process 15057
          nucleobase-containing compound metabolic process 14436
            nucleobase-containing small molecule metabolic process 1896
              nucleoside phosphate metabolic process 1630
                nucleoside triphosphate metabolic process 754
                  nucleoside triphosphate biosynthetic process 104
                    pyrimidine nucleoside triphosphate biosynthetic process 31
                      pyrimidine ribonucleoside triphosphate biosynthetic process 27
                        CTP biosynthetic process + 16
                        TTP biosynthetic process 0
                        UTP biosynthetic process 11
paths to the root

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