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ONTOLOGY REPORT - ANNOTATIONS

Term:proteasome regulatory particle, base subcomplex
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Accession:GO:0008540 term browser browse the term
Definition:The subcomplex of the proteasome regulatory particle that directly associates with the proteasome core complex.


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proteasome regulatory particle, base subcomplex term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Psmc1 proteasome 26S subunit, ATPase 1 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 6:119,392,833...119,405,233
Ensembl chr 6:119,392,855...119,410,123 		JBrowse link
G Psmc2 proteasome 26S subunit, ATPase 2 part_of IBA
IEA		 GO_REF:0000033
GO_REF:0000118		 GO_Central
TreeGrafter		 GO_REF:0000033 GO_REF:0000118 NCBI chr 4:13,255,850...13,270,160
Ensembl chr 4:13,255,856...13,270,185 		JBrowse link
G Psmc3 proteasome 26S subunit, ATPase 3 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr 3:77,031,825...77,037,207
Ensembl chr 3:77,031,825...77,043,358 		JBrowse link
G Psmc4 proteasome 26S subunit, ATPase 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 1:83,349,127...83,357,497
Ensembl chr 1:83,348,592...83,357,494 		JBrowse link
G Psmc5 proteasome 26S subunit, ATPase 5 part_of IEA
IBA		 GO_REF:0000118
GO_REF:0000033		 TreeGrafter
GO_Central		 GO_REF:0000033 GO_REF:0000118 NCBI chr10:91,187,763...91,193,697
Ensembl chr10:91,187,743...91,213,135 		JBrowse link
G Psmc6 proteasome 26S subunit, ATPase 6 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr15:18,542,585...18,564,057
Ensembl chr15:18,542,563...18,564,055 		JBrowse link
G Psmd1 proteasome 26S subunit, non-ATPase 1 part_of IEA
IBA		 GO_REF:0000104
GO_REF:0000033		 UniProt
GO_Central		 GO_REF:0000033 GO_REF:0000104 NCBI chr 9:86,709,714...86,785,213
Ensembl chr 9:86,709,947...86,785,211 		JBrowse link
G Psmd10 proteasome 26S subunit, non-ATPase 10 part_of
located_in		 IEA
ISO		 GO_REF:0000107
(PMID:19490896)		 Ensembl
RGD		 PMID:19490896 GO_REF:0000107 NCBI chr  X:104,656,809...104,665,122
Ensembl chr  X:104,656,812...104,665,097 		JBrowse link
G Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr11:80,248,364...80,258,991
Ensembl chr11:80,248,364...80,259,043 		JBrowse link
G Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 part_of IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:182,598,934...182,608,250
Ensembl chr 2:182,598,934...182,608,194 		JBrowse link
G Psmd5 proteasome 26S subunit, non-ATPase 5 located_in ISO (PMID:19412159), (PMID:19490896) RGD PMID:19412159 PMID:19490896 NCBI chr 3:18,133,715...18,151,000
Ensembl chr 3:18,133,717...18,151,029 		JBrowse link
G Psmd9 proteasome 26S subunit, non-ATPase 9 located_in ISO (PMID:19490896) RGD PMID:19490896 NCBI chr12:33,337,182...33,357,468 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  cellular_component 21392
    protein-containing complex 6987
      proteasome regulatory particle, base subcomplex 12
        cytosolic proteasome regulatory particle, base subcomplex 0
        nuclear proteasome regulatory particle, base subcomplex 0
Path 2
Term Annotations click to browse term
  cellular_component 21392
    protein-containing complex 6987
      catalytic complex 1938
        peptidase complex 135
          endopeptidase complex 98
            proteasome complex 80
              proteasome accessory complex 30
                proteasome regulatory particle 23
                  proteasome regulatory particle, base subcomplex 12
                    cytosolic proteasome regulatory particle, base subcomplex 0
                    nuclear proteasome regulatory particle, base subcomplex 0
paths to the root