transcription factor binding - Ontology Report

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Keyword

ONTOLOGY REPORT - ANNOTATIONS

Term:	transcription factor binding	go back to main search page
Accession:	GO:0008134	browse the term
Definition:	Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.
Synonyms:	exact_synonym:	TF binding

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transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Add1	adducin 1 (alpha)		ISO	14	81,750,430	81,808,919	RGD:1624291	RGD
G	Add1	adducin 1 (alpha)		IEA	14	81,750,430	81,808,919	RGD:1600115	ENSEMBL
G	Agtr2	angiotensin II receptor, type 2		IPI				RGD:1566502	RGD
G	Ahr	aryl hydrocarbon receptor		ISO	6	54,205,104	54,240,268	RGD:1624291	RGD
G	Ahr	aryl hydrocarbon receptor		IEA	6	54,205,104	54,240,268	RGD:1600115	ENSEMBL
G	Ankrd1	ankyrin repeat domain 1		IPI	1	240,316,123	240,324,804	RGD:5133283	RGD
G	Apbb1	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)		ISO	1	163,282,918	163,299,333	RGD:1624291	RGD
G	Apbb1	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)		IEA	1	163,282,918	163,299,333	RGD:1600115	ENSEMBL
G	Apbb1	amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)		ISS	1	163,282,918	163,299,333	RGD:1600115	UniProtKB
G	Apbb2	amyloid beta (A4) precursor protein-binding, family B, member 2		ISO	14	44,197,568	44,526,047	RGD:1624291	RGD
G	Ar	androgen receptor		ISO	X	85,949,507	86,119,199	RGD:1624291	RGD
G	Arid5a	AT rich interactive domain 5A (Mrf1 like)		ISO	9	35,239,813	35,244,452	RGD:1624291	RGD
G	Arid5a	AT rich interactive domain 5A (Mrf1 like)		IEA	9	35,239,813	35,244,452	RGD:1600115	ENSEMBL
G	Arnt	aryl hydrocarbon receptor nuclear translocator		ISO	2	190,333,978	190,391,015	RGD:1624291	RGD
G	Arnt	aryl hydrocarbon receptor nuclear translocator		ISO	2	190,333,978	190,391,015	RGD:1624291	RGD
G	Arnt	aryl hydrocarbon receptor nuclear translocator		ISO	2	190,333,978	190,391,015	RGD:1624291	RGD
G	Arrb1	arrestin, beta 1		ISO	1	156,871,564	156,937,540	RGD:1624291	RGD
G	Atf7	activating transcription factor 7		ISO	7	141,283,187	141,372,637	RGD:1624291	RGD
G	Atf7	activating transcription factor 7		IEA	7	141,283,187	141,372,637	RGD:1600115	ENSEMBL
G	Bcl10	B-cell CLL/lymphoma 10		ISO	2	244,116,880	244,126,393	RGD:1624291	RGD
G	Bcl10	B-cell CLL/lymphoma 10		ISS	2	244,116,880	244,126,393	RGD:1600115	UniProtKB
G	Bcl2	B-cell CLL/lymphoma 2		ISO	13	12,730,736	12,905,108	RGD:1624291	RGD
G	Bcl2	B-cell CLL/lymphoma 2		IEA	13	12,730,736	12,905,108	RGD:1600115	ENSEMBL
G	Bcl3	B-cell CLL/lymphoma 3		ISO	1	79,122,801	79,137,035	RGD:1624291	RGD
G	Bcl3	B-cell CLL/lymphoma 3		ISO	1	79,122,801	79,137,035	RGD:1624291	RGD
G	Bcl3	B-cell CLL/lymphoma 3		ISO	1	79,122,801	79,137,035	RGD:1624291	RGD
G	Bcl3	B-cell CLL/lymphoma 3		ISO	1	79,122,801	79,137,035	RGD:1624291	RGD
G	Bcl3	B-cell CLL/lymphoma 3		IEA	1	79,122,801	79,137,035	RGD:1600115	ENSEMBL
G	Bcor	BCL6 co-repressor		IEA	X	22,699,778	22,820,234	RGD:1600115	ENSEMBL
G	Bcor	BCL6 co-repressor		ISO	X	22,699,778	22,820,234	RGD:1624291	RGD
G	Brd7	bromodomain containing 7		IEA	19	20,019,637	20,048,264	RGD:1600115	ENSEMBL
G	C1qbp	complement component 1, q subcomponent binding protein		IEA	10	57,881,783	57,886,434	RGD:1600115	ENSEMBL
G	C1qbp	complement component 1, q subcomponent binding protein		ISO	10	57,881,783	57,886,434	RGD:1624291	RGD
G	Camta2	calmodulin binding transcription activator 2		ISO	10	57,549,855	57,567,958	RGD:1624291	RGD
G	Cd34	CD34 molecule		ISO	13	110,877,594	110,896,722	RGD:1624291	RGD
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISO	5	108,908,749	108,916,380	RGD:1624291	RGD
G	Cebpa	CCAAT/enhancer binding protein (C/EBP), alpha		ISO	1	87,626,111	87,627,499	RGD:1624291	RGD
G	Cebpa	CCAAT/enhancer binding protein (C/EBP), alpha		IEA	1	87,626,111	87,627,499	RGD:1600115	ENSEMBL
G	Cebpb	CCAAT/enhancer binding protein (C/EBP), beta		IPI	3	158,826,021	158,827,848	RGD:2312276	RGD
G	Cebpg	CCAAT/enhancer binding protein (C/EBP), gamma		ISO	1	87,552,695	87,559,447	RGD:1624291	RGD
G	Cebpg	CCAAT/enhancer binding protein (C/EBP), gamma		ISS	1	87,552,695	87,559,447		UniProtKB
G	Cenpf	centromere protein F		ISO	13	105,920,242	105,965,655	RGD:1624291	RGD
G	Cenpf	centromere protein F		IEA	13	105,920,242	105,965,655	RGD:1600115	InterPro
G	Chd4	chromodomain helicase DNA binding protein 4		ISO	4	161,217,964	161,251,018	RGD:1624291	RGD
G	Creb1	cAMP responsive element binding protein 1		IPI	9	63,170,785	63,234,727	RGD:2312273	RGD
G	Crebbp	CREB binding protein		ISO	10	11,598,680	11,724,122	RGD:1624291	RGD
G	Crebbp	CREB binding protein		ISO	10	11,598,680	11,724,122	RGD:1624291	RGD
G	Creg1	cellular repressor of E1A-stimulated genes 1		ISO	13	81,491,304	81,503,755	RGD:1624291	RGD
G	Creg1	cellular repressor of E1A-stimulated genes 1		IEA	13	81,491,304	81,503,755	RGD:1600115	ENSEMBL
G	Csnk2b	casein kinase 2, beta polypeptide		ISO	20	3,764,565	3,768,985	RGD:1624291	RGD
G	Ctbp1	C-terminal binding protein 1		ISO	14	83,022,824	83,050,335	RGD:1624291	RGD
G	Ctbp1	C-terminal binding protein 1		ISO	14	83,022,824	83,050,335	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1		ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1		ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Dact2	dishevelled-binding antagonist of beta-catenin 2		IEA	1	53,084,115	53,093,031	RGD:1600115	ENSEMBL
G	Dact2	dishevelled-binding antagonist of beta-catenin 2		ISO	1	53,084,115	53,093,031	RGD:1624291	RGD
G	Daxx	death-domain associated protein		ISO	20	5,121,854	5,127,601	RGD:1624291	RGD
G	Daxx	death-domain associated protein		IEA	20	5,121,854	5,127,601	RGD:1600115	ENSEMBL
G	Daxx	death-domain associated protein		ISS	20	5,121,854	5,127,601	RGD:1600115	UniProtKB
G	Ddit3	DNA-damage inducible transcript 3		ISO	7	67,247,749	67,252,571	RGD:1624291	RGD
G	Ddit3	DNA-damage inducible transcript 3		IEA	7	67,247,749	67,252,571	RGD:1600115	ENSEMBL
G	Dip2a	DIP2 disco-interacting protein 2 homolog A (Drosophila)		IEA	20	12,700,337	12,788,775	RGD:1600115	InterPro
G	Dip2b	DIP2 disco-interacting protein 2 homolog B (Drosophila)		IEA	7	138,782,124	138,958,414	RGD:1600115	InterPro
G	Dip2c	DIP2 disco-interacting protein 2 homolog C (Drosophila)		IEA	17	71,435,930	71,824,903	RGD:1600115	InterPro
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3		ISO	10	10,984,721	11,009,374	RGD:1624291	RGD
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3		ISO	10	10,984,721	11,009,374	RGD:1624291	RGD
G	Dnmt1	DNA (cytosine-5-)-methyltransferase 1		IEA	8	19,926,995	19,973,256	RGD:1600115	InterPro
G	Dot1l	DOT1-like histone H3K79 methyltransferase		IEA	7	10,428,275	10,466,913	RGD:1600115	ENSEMBL
G	Dot1l	DOT1-like histone H3K79 methyltransferase		ISO	7	10,428,275	10,466,913	RGD:1624291	RGD
G	Drap1	Dr1 associated protein 1 (negative cofactor 2 alpha)		IEA	1	208,067,906	208,070,556	RGD:1600115	ENSEMBL
G	Drap1	Dr1 associated protein 1 (negative cofactor 2 alpha)		ISO	1	208,067,906	208,070,556	RGD:1624291	RGD
G	E2f1	E2F transcription factor 1		ISO	3	145,032,489	145,043,729	RGD:1624291	RGD
G	E2f1	E2F transcription factor 1		ISO	3	145,032,489	145,043,729	RGD:1624291	RGD
G	E2f1	E2F transcription factor 1		IEA	3	145,032,489	145,043,729	RGD:1600115	ENSEMBL
G	E2f1	E2F transcription factor 1		IEA	3	145,032,489	145,043,729	RGD:1600115	ENSEMBL
G	E2f4	E2F transcription factor 4, p107/p130-binding		ISO	19	35,112,273	35,118,888	RGD:1624291	RGD
G	E2f4	E2F transcription factor 4, p107/p130-binding		IEA	19	35,112,273	35,118,888	RGD:1600115	ENSEMBL
G	E2f5	E2F transcription factor 5		ISO	2	88,346,236	88,361,733	RGD:1624291	RGD
G	Ebf4	early B-cell factor 4		ISO	3	117,910,290	117,977,045	RGD:1624291	RGD
G	Egr1	early growth response 1		IPI	18	27,343,919	27,346,117	RGD:5131651	RGD
G	Egr1	early growth response 1		IPI	18	27,343,919	27,346,117	RGD:5131650	RGD
G	Egr1	early growth response 1		IPI	18	27,343,919	27,346,117	RGD:5133261	RGD
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:2306467	RGD
G	Ep300	E1A binding protein p300		IDA	7	119,938,507	120,008,886	RGD:2312277	RGD
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:2312265	RGD
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:2316171	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Epas1	endothelial PAS domain protein 1		ISO	6	10,203,108	10,297,215	RGD:1624291	RGD
G	Epas1	endothelial PAS domain protein 1		ISO	6	10,203,108	10,297,215	RGD:1624291	RGD
G	Epn1	Epsin 1		IPI	1	67,479,998	67,496,066	RGD:2312786	RGD
G	Ercc3	excision repair cross-complementing rodent repair deficiency, complementation group 3		ISO	18	24,684,912	24,716,143	RGD:1624291	RGD
G	Ercc3	excision repair cross-complementing rodent repair deficiency, complementation group 3		IEA	18	24,684,912	24,716,143	RGD:1600115	ENSEMBL
G	Esr1	estrogen receptor 1		ISO	1	35,523,680	35,759,891	RGD:1624291	RGD
G	Esr1	estrogen receptor 1		ISO	1	35,523,680	35,759,891	RGD:1624291	RGD
G	Esr1	estrogen receptor 1		IEA	1	35,523,680	35,759,891	RGD:1600115	ENSEMBL
G	Esrrb	estrogen-related receptor beta		IEA	6	110,589,116	110,635,158	RGD:1600115	ENSEMBL
G	Esrrb	estrogen-related receptor beta		ISO	6	110,589,116	110,635,158	RGD:1624291	RGD
G	Fhl2	four and a half LIM domains 2		ISO	9	42,319,997	42,349,055	RGD:1624291	RGD
G	Fhl2	four and a half LIM domains 2		ISS	9	42,319,997	42,349,055	RGD:1600115	UniProtKB
G	Figla	folliculogenesis specific basic helix-loop-helix		IEA	4	120,156,783	120,160,708	RGD:1600115	ENSEMBL
G	Figla	folliculogenesis specific basic helix-loop-helix		ISO	4	120,156,783	120,160,708	RGD:1624291	RGD
G	Flna	filamin A, alpha		IEA	X	160,362,334	160,385,626	RGD:1600115	ENSEMBL
G	Flna	filamin A, alpha		ISO	X	160,362,334	160,385,626	RGD:1624291	RGD
G	Fos	FBJ osteosarcoma oncogene		IPI	6	109,559,135	109,562,001	RGD:5131650	RGD
G	Foxa1	forkhead box A1		IEA	6	77,976,384	78,009,176	RGD:1600115	InterPro
G	Foxa1	forkhead box A1		IPI	6	77,976,384	78,009,176		MGI
G	Foxa2	forkhead box A2		IEA	3	136,739,009	136,743,204	RGD:1600115	InterPro
G	Foxa2	forkhead box A2		IBA	3	136,739,009	136,743,204	RGD:1600115	RefGenome
G	Foxa3	forkhead box A3		IEA	1	78,368,026	78,376,953	RGD:1600115	InterPro
G	Foxa3	forkhead box A3		IBA	1	78,368,026	78,376,953	RGD:1600115	RefGenome
G	Foxb1	forkhead box B1		IBA	8	74,200,271	74,202,891	RGD:1600115	RefGenome
G	Foxc1	forkhead box C1		ISO	17	39,026,186	39,030,163	RGD:1624291	RGD
G	Foxc2	forkhead box C2		IBA				RGD:1600115	RefGenome
G	Foxd1	forkhead box D1		IBA	2	28,944,067	28,945,665	RGD:1600115	RefGenome
G	Foxd2	forkhead box D2		IBA	5	135,269,120	135,270,809	RGD:1600115	RefGenome
G	Foxd3	forkhead box D3		IBA	5	120,334,468	120,335,794	RGD:1600115	RefGenome
G	Foxd4	forkhead box D4		IBA	1	228,348,202	228,349,654	RGD:1600115	RefGenome
G	Foxe1	forkhead box E1 (thyroid transcription factor 2)		IBA	5	62,905,210	62,908,018	RGD:1600115	RefGenome
G	Foxe3	forkhead box E3		IBA	5	135,285,688	135,286,548	RGD:2290270	RefGenome
G	Foxe3	forkhead box E3		IBA	5	135,285,688	135,286,548	RGD:1600115	RefGenome
G	Foxg1	forkhead box G1		IBA	6	69,217,672	69,220,482	RGD:1600115	RefGenome
G	Foxh1	forkhead box H1		IBA	7	114,717,890	114,719,455	RGD:1600115	RefGenome
G	Foxi1	forkhead box I1		IBA	10	19,185,917	19,189,856	RGD:1600115	RefGenome
G	Foxi2	forkhead box I2		IBA	1	195,036,540	195,038,191	RGD:1600115	RefGenome
G	Foxi3	forkhead box I3		IBA	4	104,145,540	104,149,714	RGD:1600115	RefGenome
G	Foxj1	forkhead box J1		IBA				RGD:1600115	RefGenome
G	Foxj2	forkhead box J2		IBA	4	159,295,252	159,321,208	RGD:1600115	RefGenome
G	Foxj3	forkhead box J3		IBA	5	140,128,528	140,218,617	RGD:1600115	RefGenome
G	Foxk2	forkhead box K2		IBA	10	110,499,723	110,551,516	RGD:1600115	RefGenome
G	Foxl2	forkhead box L2		IBA	8	103,804,019	103,805,239	RGD:1600115	RefGenome
G	Foxm1	forkhead box M1		IBA	4	165,383,666	165,394,688	RGD:1600115	RefGenome
G	Foxn1	forkhead box N1		IBA	10	64,243,323	64,256,847	RGD:1600115	RefGenome
G	Foxn3	forkhead box N3		IBA	6	123,385,156	123,762,322	RGD:1600115	RefGenome
G	Foxn4	forkhead box N4		IBA	12	43,372,586	43,381,544	RGD:1600115	RefGenome
G	Foxo1	forkhead box O1		IBA	2	141,127,345	141,203,446	RGD:1600115	RefGenome
G	Foxo3	forkhead box O3		IBA	20	46,171,784	46,262,818	RGD:1600115	RefGenome
G	Foxo4	forkhead box O4		ISO	X	89,332,278	89,338,835	RGD:1624291	RGD
G	Foxo4	forkhead box O4		IBA	X	89,332,278	89,338,835	RGD:1600115	RefGenome
G	Foxo6	forkhead box O6		IBA	5	140,846,863	140,866,841	RGD:1600115	RefGenome
G	Foxp1	forkhead box P1		IBA	4	133,773,373	134,007,018	RGD:1600115	RefGenome
G	Foxp2	forkhead box P2		IBA	4	40,719,812	40,977,517	RGD:1600115	RefGenome
G	Foxp4	forkhead box P4		IBA	9	8,509,028	8,579,597	RGD:1600115	RefGenome
G	Foxq1	forkhead box Q1		IBA	17	39,332,906	39,334,655	RGD:1600115	RefGenome
G	Foxr1	forkhead box R1		IBA	8	47,402,097	47,411,700	RGD:1600115	RefGenome
G	Foxr2	forkhead box R2		IBA	X	38,395,980	38,396,888	RGD:1600115	RefGenome
G	Foxs1	forkhead box S1		IBA	3	143,272,507	143,273,776	RGD:1600115	RefGenome
G	Gabbr1	gamma-aminobutyric acid (GABA) B receptor 1		IPI	20	1,553,297	1,582,426	RGD:631878	RGD
G	Gata2	GATA binding protein 2		ISO	4	122,279,753	122,288,528	RGD:1624291	RGD
G	Gata2	GATA binding protein 2		IEA	4	122,279,753	122,288,528	RGD:1600115	ENSEMBL
G	Gata3	GATA binding protein 3		ISO	17	79,991,587	80,011,574	RGD:1624291	RGD
G	Gata3	GATA binding protein 3		IEA	17	79,991,587	80,011,574	RGD:1600115	ENSEMBL
G	Gata4	GATA binding protein 4		IDA	15	42,472,793	42,519,569	RGD:727369	RGD
G	Gata4	GATA binding protein 4		IPI	15	42,472,793	42,519,569	RGD:2312265	RGD
G	Gata4	GATA binding protein 4		ISO	15	42,472,793	42,519,569	RGD:1624291	RGD
G	Gata4	GATA binding protein 4		IPI	15	42,472,793	42,519,569		UniProtKB
G	Gata6	GATA binding protein 6		ISO	18	2,504,264	2,534,648	RGD:1624291	RGD
G	Gata6	GATA binding protein 6		ISO	18	2,504,264	2,534,648	RGD:1624291	RGD
G	Gata6	GATA binding protein 6		ISO	18	2,504,264	2,534,648	RGD:1624291	RGD
G	Gata6	GATA binding protein 6		IPI	18	2,504,264	2,534,648		UniProtKB
G	Gcm1	glial cells missing homolog 1 (Drosophila)		ISO	8	83,018,975	83,032,211	RGD:1624291	RGD
G	Gcm1	glial cells missing homolog 1 (Drosophila)		IEA	8	83,018,975	83,032,211	RGD:1600115	ENSEMBL
G	Gnptab	N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits		IEA	7	25,084,137	25,149,880	RGD:1600115	InterPro
G	Gtf2a1	general transcription factor IIA, 1		ISO	6	115,180,871	115,210,825	RGD:1624291	RGD
G	Gtf2a2	general transcription factor IIA, 2		ISO	8	74,447,866	74,456,735	RGD:1624291	RGD
G	Gtf2b	general transcription factor IIB		ISO	2	240,877,342	240,895,650	RGD:1624291	RGD
G	Gtf2f1	general transcription factor IIF, polypeptide 1		ISO				RGD:1624291	RGD
G	Gtf2f1	general transcription factor IIF, polypeptide 1		IEA				RGD:1600115	ENSEMBL
G	Hand1	heart and neural crest derivatives expressed 1		ISO	10	43,423,366	43,425,933	RGD:1624291	RGD
G	Hand1	heart and neural crest derivatives expressed 1		ISO	10	43,423,366	43,425,933	RGD:1624291	RGD
G	Hand1	heart and neural crest derivatives expressed 1		ISO	10	43,423,366	43,425,933	RGD:1624291	RGD
G	Hand2	heart and neural crest derivatives expressed 2		IPI	16	36,324,327	36,348,104	RGD:5132893	RGD
G	Hand2	heart and neural crest derivatives expressed 2		ISO	16	36,324,327	36,348,104	RGD:1624291	RGD
G	Hand2	heart and neural crest derivatives expressed 2		ISO	16	36,324,327	36,348,104	RGD:1624291	RGD
G	Hand2	heart and neural crest derivatives expressed 2		IPI	16	36,324,327	36,348,104	RGD:727369	BHF-UCL
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac2	histone deacetylase 2		ISO	20	41,162,093	41,186,492	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac5	histone deacetylase 5		ISO	10	91,266,512	91,277,705	RGD:1624291	RGD
G	Hdac5	histone deacetylase 5		ISO	10	91,266,512	91,277,705	RGD:1624291	RGD
G	Hdac7	histone deacetylase 7		TAS	7	136,501,738	136,523,073		UniProtKB
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		ISO	1	27,505,117	27,515,204	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox		ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)		IEA	6	96,419,024	96,463,891	RGD:1600115	ENSEMBL
G	Hif1a	hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor)		ISO	6	96,419,024	96,463,891	RGD:1624291	RGD
G	Hmga1	high mobility group AT-hook 1		ISS	20	5,769,052	5,772,269	RGD:1600115	UniProtKB
G	Hmga2	high mobility group AT-hook 2		ISO	7	59,638,555	59,753,791	RGD:1624291	RGD
G	Hmga2	high mobility group AT-hook 2		IEA	7	59,638,555	59,753,791	RGD:1600115	ENSEMBL
G	Hmgb1	high mobility group box 1		IDA				RGD:632908	RGD
G	Hmgb1	high mobility group box 1		ISO				RGD:1624291	RGD
G	Hnf1a	HNF1 homeobox A		IPI	12	42,919,574	42,945,670	RGD:1581923	RGD
G	Hnf4a	hepatocyte nuclear factor 4, alpha		IPI	3	154,459,863	154,482,825	RGD:1624995	RGD
G	Hoxa7	homeobox A7		ISO	4	80,515,622	80,517,521	RGD:1624291	RGD
G	Htt	huntingtin		ISO	14	81,490,322	81,636,856	RGD:1624291	RGD
G	Htt	huntingtin		IEA	14	81,490,322	81,636,856	RGD:1600115	ENSEMBL
G	Htt	huntingtin		IBA	14	81,490,322	81,636,856	RGD:1600115	RefGenome
G	Hyal1	hyaluronoglucosaminidase 1		ISO	8	112,824,562	112,826,875	RGD:1624291	RGD
G	Hyal1	hyaluronoglucosaminidase 1		IEA	8	112,824,562	112,826,875	RGD:1600115	ENSEMBL
G	Hyal1	hyaluronoglucosaminidase 1		ISS	8	112,824,562	112,826,875	RGD:1600115	UniProtKB
G	Id3	inhibitor of DNA binding 3		ISO	5	154,934,138	154,935,707	RGD:1624291	RGD
G	Ift172	intraflagellar transport 172 homolog (Chlamydomonas)		IDA				RGD:633929	RGD
G	Ighmbp2	immunoglobulin mu binding protein 2		ISO	1	205,792,891	205,815,212	RGD:1624291	RGD
G	Ighmbp2	immunoglobulin mu binding protein 2		IEA	1	205,792,891	205,815,212	RGD:1600115	ENSEMBL
G	Insig2	insulin induced gene 2		IDA	13	33,331,951	33,345,132	RGD:724448	RGD
G	Jak3	Janus kinase 3		IC	16	18,878,139	18,889,441	RGD:1600262	RGD
G	Jun	jun proto-oncogene		IPI	5	115,358,166	115,361,259	RGD:5131651	RGD
G	Jun	jun proto-oncogene		ISO	5	115,358,166	115,361,259	RGD:1624291	RGD
G	Kat5	K(lysine) acetyltransferase 5		IDA	1	208,233,434	208,240,738	RGD:1302285	RGD
G	Kat6a	K(lysine) acetyltransferase 6A		ISO	16	73,553,868	73,634,794	RGD:1624291	RGD
G	Kat6a	K(lysine) acetyltransferase 6A		ISO	16	73,553,868	73,634,794	RGD:1624291	RGD
G	Kat6a	K(lysine) acetyltransferase 6A		ISS	16	73,553,868	73,634,794	RGD:1600115	UniProtKB
G	Kat8	K (lysine) acetyltransferase 8		ISO	1	187,198,682	187,210,962	RGD:1624291	RGD
G	Kat8	K (lysine) acetyltransferase 8		ISO	1	187,198,682	187,210,962	RGD:1624291	RGD
G	Kat8	K (lysine) acetyltransferase 8		IEA	1	187,198,682	187,210,962	RGD:1600115	ENSEMBL
G	Kctd1	potassium channel tetramerisation domain containing 1		ISO	18	6,225,049	6,324,832	RGD:1624291	RGD
G	Kctd1	potassium channel tetramerisation domain containing 1		IEA	18	6,225,049	6,324,832	RGD:1600115	ENSEMBL
G	Kdm1a	lysine (K)-specific demethylase 1A		ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Kdm1a	lysine (K)-specific demethylase 1A		ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Kdm1a	lysine (K)-specific demethylase 1A		ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Klf4	Kruppel-like factor 4 (gut)		ISO	5	73,446,928	73,451,286	RGD:1624291	RGD
G	Lcor	ligand dependent nuclear receptor corepressor		IEA	1	246,702,984	246,800,587	RGD:1600115	ENSEMBL
G	Lef1	lymphoid enhancer binding factor 1		ISO	2	228,550,263	228,673,131	RGD:1624291	RGD
G	Lef1	lymphoid enhancer binding factor 1		IEA	2	228,550,263	228,673,131	RGD:1600115	ENSEMBL
G	Lmo4	LIM domain only 4		ISO	2	242,498,074	242,515,160	RGD:1624291	RGD
G	Lmo4	LIM domain only 4		IEA	2	242,498,074	242,515,160	RGD:1600115	ENSEMBL
G	LOC257642	rRNA promoter binding protein		IDA				RGD:1299600	RGD
G	LOC680273	similar to Forkhead box protein L1 (Forkhead-related protein FKHL11) (Forkhead-related transcription factor 7) (FREAC-7)		IBA	12	16,332,382	16,334,529	RGD:1600115	RefGenome
G	LOC687536	similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog 8) (HFH-8)		IBA				RGD:1600115	RefGenome
G	LOC687553	similar to Forkhead box protein L1 (Forkhead-related protein FKHL11) (Transcription factor FKH-6)		IBA				RGD:1600115	RefGenome
G	Mafb	v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)		IEA	3	151,116,831	151,118,751	RGD:1600115	ENSEMBL
G	Mafb	v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)		ISO	3	151,116,831	151,118,751	RGD:1624291	RGD
G	Mapk1	mitogen activated protein kinase 1		IPI	11	85,968,732	86,030,387	RGD:2312282	RGD
G	Mapk9	mitogen-activated protein kinase 9		IDA	10	35,353,486	35,384,319	RGD:2304245	RGD
G	Mapk9	mitogen-activated protein kinase 9		ISO	10	35,353,486	35,384,319	RGD:1624291	RGD
G	Mdfi	MyoD family inhibitor		IEA	9	8,623,038	8,641,388	RGD:1600115	ENSEMBL
G	Mdfi	MyoD family inhibitor		ISO	9	8,623,038	8,641,388	RGD:1624291	RGD
G	Mdfi	MyoD family inhibitor		ISO	9	8,623,038	8,641,388	RGD:1624291	RGD
G	Mdfic	MyoD family inhibitor domain containing		ISO	4	41,241,856	41,321,515	RGD:1624291	RGD
G	Mecp2	methyl CpG binding protein 2		ISO	X	159,980,599	160,035,260	RGD:1624291	RGD
G	Mecp2	methyl CpG binding protein 2		IEA	X	159,980,599	160,035,260	RGD:1600115	ENSEMBL
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med25	mediator complex subunit 25		ISO	1	95,351,526	95,364,403	RGD:1624291	RGD
G	Med6	mediator complex subunit 6		IEA	6	105,432,911	105,446,531	RGD:1600115	ENSEMBL
G	Med6	mediator complex subunit 6		ISO	6	105,432,911	105,446,531	RGD:1624291	RGD
G	Meis2	Meis homeobox 2		ISO	3	101,915,966	102,117,215	RGD:1624291	RGD
G	Meis2	Meis homeobox 2		ISO	3	101,915,966	102,117,215	RGD:1624291	RGD
G	Mlx	MLX, MAX dimerization protein		IEA	10	90,104,233	90,108,952	RGD:1600115	ENSEMBL
G	Mlx	MLX, MAX dimerization protein		ISO	10	90,104,233	90,108,952	RGD:1624291	RGD
G	Mlxipl	MLX interacting protein-like		ISO				RGD:1624291	RGD
G	Mlxipl	MLX interacting protein-like		ISO				RGD:1624291	RGD
G	Msx2	msh homeobox 2		ISO	17	17,243,262	17,248,927	RGD:1624291	RGD
G	Myc	myelocytomatosis oncogene		ISO	7	98,953,142	98,958,060	RGD:1624291	RGD
G	Myocd	myocardin		ISO	10	51,496,223	51,588,226	RGD:1624291	RGD
G	Myocd	myocardin		IEA	10	51,496,223	51,588,226	RGD:1600115	ENSEMBL
G	Myod1	myogenic differentiation 1		IEA	1	96,910,190	96,912,900	RGD:1600115	ENSEMBL
G	Myod1	myogenic differentiation 1		ISO	1	96,910,190	96,912,900	RGD:1624291	RGD
G	Naaa	N-acylethanolamine acid amidase		ISO	14	17,338,759	17,358,274	RGD:1624291	RGD
G	Naaa	N-acylethanolamine acid amidase		IEA	14	17,338,759	17,358,274	RGD:1600115	ENSEMBL
G	Nab1	Ngfi-A binding protein 1		ISO	9	46,084,090	46,124,259	RGD:1624291	RGD
G	Nab1	Ngfi-A binding protein 1		IEA	9	46,084,090	46,124,259	RGD:1600115	ENSEMBL
G	Nab2	Ngfi-A binding protein 2		ISO	7	67,642,321	67,648,713	RGD:1624291	RGD
G	Nab2	Ngfi-A binding protein 2		IEA	7	67,642,321	67,648,713	RGD:1600115	ENSEMBL
G	Nbn	nibrin		ISO	5	30,541,610	30,576,168	RGD:1624291	RGD
G	Nbn	nibrin		IEA	5	30,541,610	30,576,168	RGD:1600115	ENSEMBL
G	Nbn	nibrin		ISS	5	30,541,610	30,576,168	RGD:1600115	UniProtKB
G	Ncoa1	nuclear receptor coactivator 1		IPI	6	27,224,396	27,473,926	RGD:5688171	RGD
G	Neurod1	neuronal differentiation 1		ISO	3	62,224,633	62,227,936	RGD:1624291	RGD
G	Neurod1	neuronal differentiation 1		ISO	3	62,224,633	62,227,936	RGD:1624291	RGD
G	Nfatc1	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1		ISO	18	77,498,654	77,581,231	RGD:1624291	RGD
G	Nfatc4	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 4		IPI	15	33,969,774	33,978,848	RGD:5687133	RGD
G	Nfia	nuclear factor I/A		ISO	5	118,152,938	118,507,056	RGD:1624291	RGD
G	Nfia	nuclear factor I/A		IEA	5	118,152,938	118,507,056	RGD:1600115	ENSEMBL
G	Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B-cells 1		ISO	2	233,091,013	233,187,501	RGD:1624291	RGD
G	Nif3l1	NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)		IEA	9	57,105,338	57,122,976	RGD:1600115	ENSEMBL
G	Nif3l1	NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae)		ISO	9	57,105,338	57,122,976	RGD:1624291	RGD
G	Nkx2-2	NK2 homeobox 2		ISO	3	135,837,591	135,839,963	RGD:1624291	RGD
G	Nkx2-2	NK2 homeobox 2		IEA	3	135,837,591	135,839,963	RGD:1600115	ENSEMBL
G	Nkx2-5	NK2 homeobox 5		ISO	10	16,606,183	16,608,952	RGD:1624291	RGD
G	Nkx2-5	NK2 homeobox 5		ISO	10	16,606,183	16,608,952	RGD:1624291	RGD
G	Nkx2-5	NK2 homeobox 5		IEA	10	16,606,183	16,608,952	RGD:1600115	ENSEMBL
G	Nkx3-1	NK3 homeobox 1		ISO	15	49,743,313	49,745,905	RGD:1624291	RGD
G	Nkx3-1	NK3 homeobox 1		ISO	15	49,743,313	49,745,905	RGD:1624291	RGD
G	Nkx3-1	NK3 homeobox 1		ISO	15	49,743,313	49,745,905	RGD:1624291	RGD
G	Nkx3-1	NK3 homeobox 1		IEA	15	49,743,313	49,745,905	RGD:1600115	ENSEMBL
G	Nkx3-1	NK3 homeobox 1		IEA	15	49,743,313	49,745,905	RGD:1600115	ENSEMBL
G	Nlk	nemo like kinase		IEA	10	64,681,240	64,804,942	RGD:1600115	ENSEMBL
G	Nlk	nemo like kinase		ISO	10	64,681,240	64,804,942	RGD:1624291	RGD
G	Nolc1	nucleolar and coiled-body phosphoprotein 1		IPI	1	251,297,417	251,308,127	RGD:2303817	RGD
G	Nr0b1	nuclear receptor subfamily 0, group B, member 1		ISO	X	73,006,294	73,010,422	RGD:1624291	RGD
G	Nr0b1	nuclear receptor subfamily 0, group B, member 1		IEA	X	73,006,294	73,010,422	RGD:1600115	ENSEMBL
G	Nr0b2	nuclear receptor subfamily 0, group B, member 2		IPI	5	151,524,685	151,528,000	RGD:1600916	RGD
G	Nr0b2	nuclear receptor subfamily 0, group B, member 2		IPI	5	151,524,685	151,528,000	RGD:633448	RGD
G	Nr3c1	nuclear receptor subfamily 3, group C, member 1		IPI	18	32,371,496	32,459,145	RGD:4892121	RGD
G	Parp1	poly (ADP-ribose) polymerase 1		ISO	13	96,309,670	96,341,486	RGD:1624291	RGD
G	Parp1	poly (ADP-ribose) polymerase 1		IEA	13	96,309,670	96,341,486	RGD:1600115	ENSEMBL
G	Pax6	paired box 6		ISO	3	91,127,605	91,149,178	RGD:1624291	RGD
G	Pax6	paired box 6		IEA	3	91,127,605	91,149,178	RGD:1600115	ENSEMBL
G	Paxbp1	PAX3 and PAX7 binding protein 1		ISO	11	31,001,934	31,030,820	RGD:1624291	RGD
G	Pbx1	pre-B-cell leukemia homeobox 1		IEA	13	83,839,256	84,115,516	RGD:1600115	ENSEMBL
G	Pbx1	pre-B-cell leukemia homeobox 1		ISO	13	83,839,256	84,115,516	RGD:1624291	RGD
G	Pbx2	pre-B-cell leukemia homeobox 2		ISO	20	4,253,962	4,259,185	RGD:1624291	RGD
G	Pbx2	pre-B-cell leukemia homeobox 2		IEA	20	4,253,962	4,259,185	RGD:1600115	ENSEMBL
G	Pcaf	p300/CBP-associated factor		IPI	9	882,928	889,661	RGD:2312271	RGD
G	Pcna	proliferating cell nuclear antigen		ISO	3	120,008,715	120,012,589	RGD:1624291	RGD
G	Pdcd11	programmed cell death 11		IEA	1	252,413,500	252,454,620	RGD:1600115	ENSEMBL
G	Pdcd11	programmed cell death 11		ISO	1	252,413,500	252,454,620	RGD:1624291	RGD
G	Pdx1	pancreatic and duodenal homeobox 1		IPI				RGD:2311164	RGD
G	Pim1	pim-1 oncogene		ISO	20	7,817,403	7,821,800	RGD:1624291	RGD
G	Pim1	pim-1 oncogene		IEA	20	7,817,403	7,821,800	RGD:1600115	ENSEMBL
G	Pitx2	paired-like homeodomain 2		ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Pitx2	paired-like homeodomain 2		ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1		ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Pou5f1	POU class 5 homeobox 1		ISO				RGD:1624291	RGD
G	Pou5f1	POU class 5 homeobox 1		ISO				RGD:1624291	RGD
G	Pou5f1	POU class 5 homeobox 1		ISO				RGD:1624291	RGD
G	Pou5f1	POU class 5 homeobox 1		ISO				RGD:1624291	RGD
G	Pou5f1	POU class 5 homeobox 1		IEA				RGD:1600115	ENSEMBL
G	Ppargc1a	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha		ISO	14	64,278,115	64,370,912	RGD:1624291	RGD
G	Ppargc1a	peroxisome proliferator-activated receptor gamma, coactivator 1 alpha		IEA	14	64,278,115	64,370,912	RGD:1600115	ENSEMBL
G	Ppid	peptidylprolyl isomerase D		ISS	2	170,995,919	171,007,932	RGD:1600115	UniProtKB
G	Ppid	peptidylprolyl isomerase D		ISO	2	170,995,919	171,007,932	RGD:1624291	RGD
G	Prickle1	prickle homolog 1 (Drosophila)		IPI	7	131,967,220	131,986,187	RGD:1302877	RGD
G	Prkdc	protein kinase, DNA activated, catalytic polypeptide		ISO	11	86,951,420	87,169,229	RGD:1624291	RGD
G	Psmc5	proteasome (prosome, macropain) 26S subunit, ATPase, 5		ISO	10	95,650,987	95,656,921	RGD:1624291	RGD
G	Psmc5	proteasome (prosome, macropain) 26S subunit, ATPase, 5		ISO	10	95,650,987	95,656,921	RGD:1624291	RGD
G	Psmc5	proteasome (prosome, macropain) 26S subunit, ATPase, 5		ISS	10	95,650,987	95,656,921	RGD:1600115	UniProtKB
G	Psmd10	proteasome (prosome, macropain) 26S subunit, non-ATPase, 10		ISO				RGD:1624291	RGD
G	Pura	purine rich element binding protein A		ISO	18	28,916,722	28,925,008	RGD:1624291	RGD
G	Pura	purine rich element binding protein A		ISO	18	28,916,722	28,925,008	RGD:1624291	RGD
G	Pura	purine rich element binding protein A		IEA	18	28,916,722	28,925,008	RGD:1600115	ENSEMBL
G	Purb	purine rich element binding protein B		ISO	14	87,230,346	87,232,805	RGD:1624291	RGD
G	Purb	purine rich element binding protein B		ISS	14	87,230,346	87,232,805	RGD:1600115	UniProtKB
G	Rara	retinoic acid receptor, alpha		ISO	10	87,740,479	87,753,265	RGD:1624291	RGD
G	Rara	retinoic acid receptor, alpha		ISO	10	87,740,479	87,753,265	RGD:1624291	RGD
G	Rara	retinoic acid receptor, alpha		IPI	10	87,740,479	87,753,265	RGD:6771323	RGD
G	Rb1	retinoblastoma 1		ISO	15	53,828,881	53,962,099	RGD:1624291	RGD
G	Rb1	retinoblastoma 1		ISO	15	53,828,881	53,962,099	RGD:1624291	RGD
G	Rb1	retinoblastoma 1		ISO	15	53,828,881	53,962,099	RGD:1624291	RGD
G	Rb1	retinoblastoma 1		ISS	15	53,828,881	53,962,099	RGD:1600115	UniProtKB
G	Rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2		ISS	7	115,143,721	115,384,534	RGD:1600115	UniProtKB
G	Rbfox2	RNA binding protein, fox-1 homolog (C. elegans) 2		ISO	7	115,143,721	115,384,534	RGD:1624291	RGD
G	Rbl1	retinoblastoma-like 1 (p107)		ISO	3	147,734,622	147,796,630	RGD:1624291	RGD
G	Rbpj	recombination signal binding protein for immunoglobulin kappa J region		ISO				RGD:1624291	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		IPI	1	208,262,669	208,273,148	RGD:2312270	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		ISO	1	208,262,669	208,273,148	RGD:1624291	RGD
G	Rest	RE1-silencing transcription factor		ISO	14	33,136,046	33,151,142	RGD:1624291	RGD
G	Rest	RE1-silencing transcription factor		IPI	14	33,136,046	33,151,142		UniProtKB
G	Rnf4	ring finger protein 4		ISO	14	82,092,024	82,112,036	RGD:1624291	RGD
G	Rps6ka1	ribosomal protein S6 kinase polypeptide 1		IDA	5	151,274,666	151,288,007	RGD:727422	RGD
G	RT1-Bb	RT1 class II, locus Bb		ISO	20	4,730,559	4,736,201	RGD:1624291	RGD
G	Runx1	runt-related transcription factor 1		ISO	11	32,623,461	32,725,404	RGD:1624291	RGD
G	Runx2	runt-related transcription factor 2		IPI	9	11,869,234	12,025,219	RGD:2312272	RGD
G	Rxra	retinoid X receptor alpha		ISO	3	6,605,782	6,689,224	RGD:1624291	RGD
G	Sin3a	SIN3 transcription regulator homolog A (yeast)		ISO	8	60,832,595	60,884,764	RGD:1624291	RGD
G	Sin3a	SIN3 transcription regulator homolog A (yeast)		ISO	8	60,832,595	60,884,764	RGD:1624291	RGD
G	Sirt2	sirtuin 2		ISO	1	83,873,578	83,896,121	RGD:1624291	RGD
G	Sirt2	sirtuin 2		ISO	1	83,873,578	83,896,121	RGD:1624291	RGD
G	Sirt2	sirtuin 2		IEA	1	83,873,578	83,896,121	RGD:1600115	ENSEMBL
G	Smad2	SMAD family member 2		IPI	18	73,180,520	73,241,707	RGD:2301880	RGD
G	Smad2	SMAD family member 2		ISO	18	73,180,520	73,241,707	RGD:1624291	RGD
G	Smad2	SMAD family member 2		ISO	18	73,180,520	73,241,707	RGD:1624291	RGD
G	Smad2	SMAD family member 2		ISO	18	73,180,520	73,241,707	RGD:1624291	RGD
G	Smad2	SMAD family member 2		ISS	18	73,180,520	73,241,707	RGD:1600115	UniProtKB
G	Smad3	SMAD family member 3		IPI	8	67,803,909	67,952,056	RGD:2301880	RGD
G	Smad3	SMAD family member 3		IDA	8	67,803,909	67,952,056	RGD:2300420	RGD
G	Smad3	SMAD family member 3		ISO	8	67,803,909	67,952,056	RGD:1624291	RGD
G	Smad3	SMAD family member 3		ISO	8	67,803,909	67,952,056	RGD:1624291	RGD
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		ISO	8	20,720,915	20,812,157	RGD:1624291	RGD
G	Smarcd3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3		ISO	4	5,928,215	5,959,791	RGD:1624291	RGD
G	Smarcd3	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3		IEA	4	5,928,215	5,959,791	RGD:1600115	ENSEMBL
G	Snf8	SNF8, ESCRT-II complex subunit		ISO	10	84,749,033	84,761,230	RGD:1624291	RGD
G	Snf8	SNF8, ESCRT-II complex subunit		IEA	10	84,749,033	84,761,230	RGD:1600115	ENSEMBL
G	Sorbs3	sorbin and SH3 domain containing 3		ISO	15	50,580,018	50,611,107	RGD:1624291	RGD
G	Sorbs3	sorbin and SH3 domain containing 3		IEA	15	50,580,018	50,611,107	RGD:1600115	ENSEMBL
G	Sost	sclerostin		ISO	10	91,023,712	91,026,759	RGD:1624291	RGD
G	Sost	sclerostin		IEA	10	91,023,712	91,026,759	RGD:1600115	ENSEMBL
G	Sox10	SRY (sex determining region Y)-box 10		IDA	7	117,138,694	117,149,939	RGD:6892704	RGD
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox10	SRY (sex determining region Y)-box 10		IPI	7	117,138,694	117,149,939	RGD:6892704	UniProtKB
G	Sox17	SRY (sex determining region Y)-box 17		IEA	5	15,241,405	15,246,904	RGD:1600115	ENSEMBL
G	Sox17	SRY (sex determining region Y)-box 17		ISO	5	15,241,405	15,246,904	RGD:1624291	RGD
G	Sox17	SRY (sex determining region Y)-box 17		ISO	5	15,241,405	15,246,904	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2		ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Sox2	SRY (sex determining region Y)-box 2		ISO	2	120,969,021	120,971,430	RGD:1624291	RGD
G	Sox8	SRY (sex determining region Y)-box 8		ISO	10	14,818,955	14,823,943	RGD:1624291	RGD
G	Sox8	SRY (sex determining region Y)-box 8		IEA	10	14,818,955	14,823,943	RGD:1600115	ENSEMBL
G	Sp1	Sp1 transcription factor		ISO	7	141,164,180	141,194,509	RGD:1624291	RGD
G	Sp1	Sp1 transcription factor		ISO	7	141,164,180	141,194,509	RGD:1624291	RGD
G	Sp1	Sp1 transcription factor		IEA	7	141,164,180	141,194,509	RGD:1600115	ENSEMBL
G	Sp100	SP100 nuclear antigen		ISO	9	84,374,288	84,409,976	RGD:1624291	RGD
G	Srf	serum response factor (c-fos serum response element-binding transcription factor)		ISO	9	9,788,378	9,797,639	RGD:1624291	RGD
G	Srf	serum response factor (c-fos serum response element-binding transcription factor)		ISO	9	9,788,378	9,797,639	RGD:1624291	RGD
G	Sry	sex determining region Y		ISO				RGD:1624291	RGD
G	Stat3	signal transducer and activator of transcription 3 (acute-phase response factor)		IPI	10	89,821,078	89,872,970	RGD:2306467	RGD
G	Stat3	signal transducer and activator of transcription 3 (acute-phase response factor)		ISO	10	89,821,078	89,872,970	RGD:1624291	RGD
G	Stk36	serine/threonine kinase 36		IEA	9	73,951,045	73,977,783	RGD:1600115	ENSEMBL
G	Stk36	serine/threonine kinase 36		ISO	9	73,951,045	73,977,783	RGD:1624291	RGD
G	Stk4	serine/threonine kinase 4		ISO	3	155,014,941	155,095,272	RGD:1624291	RGD
G	Stk4	serine/threonine kinase 4		IEA	3	155,014,941	155,095,272	RGD:1600115	ENSEMBL
G	Sufu	suppressor of fused homolog (Drosophila)		IEA	1	251,612,377	251,708,109	RGD:1600115	ENSEMBL
G	Sufu	suppressor of fused homolog (Drosophila)		ISO	1	251,612,377	251,708,109	RGD:1624291	RGD
G	Sumo1	small ubiquitin-like modifier 1		ISO	9	58,212,538	58,242,760	RGD:1624291	RGD
G	Sumo1	small ubiquitin-like modifier 1		IEA	9	58,212,538	58,242,760	RGD:1600115	ENSEMBL
G	Taf1	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	X	89,590,556	89,666,569	RGD:1624291	RGD
G	Taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IEA				RGD:1600115	ENSEMBL
G	Taf12	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO				RGD:1624291	RGD
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	18	30,541,432	30,543,580	RGD:1624291	RGD
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	18	30,541,432	30,543,580	RGD:1624291	RGD
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	18	30,541,432	30,543,580	RGD:1624291	RGD
G	Tbl1x	transducin (beta)-like 1 X-linked		ISO	X	63,310,560	63,392,534	RGD:1624291	RGD
G	Tbl1x	transducin (beta)-like 1 X-linked		IEA	X	63,310,560	63,392,534	RGD:1600115	ENSEMBL
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tbx5	T-box 5		IEA	12	37,956,658	38,004,255	RGD:1600115	ENSEMBL
G	Tbx5	T-box 5		ISO	12	37,956,658	38,004,255	RGD:1624291	RGD
G	Tcf3	transcription factor 3		IPI	7	10,791,311	10,813,613	RGD:2312273	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tcf3	transcription factor 3		ISS	7	10,791,311	10,813,613	RGD:1600115	UniProtKB
G	Tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)		ISO	1	262,031,823	262,226,710	RGD:1624291	RGD
G	Tdg	thymine-DNA glycosylase		IDA	7	23,300,450	23,320,095	RGD:634482	RGD
G	Tfap2a	transcription factor AP-2 alpha		IPI	17	30,017,580	30,034,852	RGD:5133261	RGD
G	Tfdp2	transcription factor Dp-2 (E2F dimerization partner 2)		IEA	8	101,256,112	101,392,512	RGD:1600115	ENSEMBL
G	Tfdp2	transcription factor Dp-2 (E2F dimerization partner 2)		ISO	8	101,256,112	101,392,512	RGD:1624291	RGD
G	Thra	thyroid hormone receptor alpha		ISO	10	87,514,443	87,542,306	RGD:1624291	RGD
G	Tle1	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)		ISO	5	89,682,837	89,765,682	RGD:1624291	RGD
G	Tle1	transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)		ISO	5	89,682,837	89,765,682	RGD:1624291	RGD
G	Tmem173	transmembrane protein 173		IEA	18	28,355,029	28,357,171	RGD:1600115	ENSEMBL
G	Tmem173	transmembrane protein 173		ISO	18	28,355,029	28,357,171	RGD:1624291	RGD
G	Tp53	tumor protein p53		ISO	10	56,399,721	56,411,150	RGD:1624291	RGD
G	Tp53	tumor protein p53		ISO	10	56,399,721	56,411,150	RGD:1624291	RGD
G	Tp53	tumor protein p53		ISO	10	56,399,721	56,411,150	RGD:1624291	RGD
G	Tp73	tumor protein p73		ISO	5	170,848,979	171,078,739	RGD:1624291	RGD
G	Tp73	tumor protein p73		IEA	5	170,848,979	171,078,739	RGD:1600115	ENSEMBL
G	Tpt1	tumor protein, translationally-controlled 1		ISO	15	56,752,464	56,755,288	RGD:1624291	RGD
G	Trappc2	trafficking protein particle complex 2		ISO	X	48,690,381	48,701,588	RGD:1624291	RGD
G	Trerf1	transcriptional regulating factor 1		IEA	9	9,092,501	9,136,587	RGD:1600115	ENSEMBL
G	Trib1	tribbles homolog 1 (Drosophila)		ISO	7	96,442,239	96,448,785	RGD:1624291	RGD
G	Trib1	tribbles homolog 1 (Drosophila)		ISO	7	96,442,239	96,448,785	RGD:1624291	RGD
G	Trib1	tribbles homolog 1 (Drosophila)		IEA	7	96,442,239	96,448,785	RGD:1600115	ENSEMBL
G	Trib1	tribbles homolog 1 (Drosophila)		ISO	7	96,442,239	96,448,785	RGD:1624291	RGD
G	Trib2	tribbles homolog 2 (Drosophila)		IEA	6	39,474,243	39,496,718	RGD:1600115	ENSEMBL
G	Twist1	twist basic helix-loop-helix transcription factor 1		ISO	6	52,605,869	52,607,863	RGD:1624291	RGD
G	Twist1	twist basic helix-loop-helix transcription factor 1		ISO	6	52,605,869	52,607,863	RGD:1624291	RGD
G	Uba2	ubiquitin-like modifier activating enzyme 2		ISO	1	86,605,412	86,633,144	RGD:1624291	RGD
G	Uba2	ubiquitin-like modifier activating enzyme 2		IEA	1	86,605,412	86,633,144	RGD:1600115	ENSEMBL
G	Ube2i	ubiquitin-conjugating enzyme E2I		ISO	10	14,509,948	14,524,551	RGD:1624291	RGD
G	Usp7	ubiquitin specific peptidase 7 (herpes virus-associated)		ISO	10	6,917,612	6,963,452	RGD:1624291	RGD
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		TAS	4	149,529,396	149,536,289	RGD:61592	RGD
G	Vhl	von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase		ISO	4	149,529,396	149,536,289	RGD:1624291	RGD
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Ybx1	Y box binding protein 1		IPI	5	139,859,176	139,875,840	RGD:5133283	RGD
G	Ywhaz	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide		ISO	7	72,283,825	72,306,126	RGD:1624291	RGD
G	Ywhaz	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide		IEA	7	72,283,825	72,306,126	RGD:1600115	ENSEMBL
G	Zeb1	zinc finger E-box binding homeobox 1		ISO	17	60,177,150	60,198,584	RGD:1624291	RGD
G	Zeb1	zinc finger E-box binding homeobox 1		IEA	17	60,177,150	60,198,584	RGD:1600115	ENSEMBL
G	Zfp292	zinc finger protein 292		NAS	5	51,438,560	51,518,820	RGD:61786	RGD
G	Zfpm1	zinc finger protein, multitype 1		ISO	19	52,526,720	52,587,089	RGD:1624291	RGD
G	Zfpm2	zinc finger protein, multitype 2		ISO	7	76,210,472	76,654,443	RGD:1624291	RGD
G	Zfpm2	zinc finger protein, multitype 2		ISO	7	76,210,472	76,654,443	RGD:1624291	RGD
G	Zfpm2	zinc finger protein, multitype 2		IEA	7	76,210,472	76,654,443	RGD:1600115	ENSEMBL
G	Zfpm2	zinc finger protein, multitype 2		ISO	7	76,210,472	76,654,443	RGD:1624291	RGD
activating transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ciita	class II, major histocompatibility complex, transactivator		ISO	10	5,087,174	5,133,418	RGD:1624291	RGD
G	Ciita	class II, major histocompatibility complex, transactivator		IEA	10	5,087,174	5,133,418	RGD:1600115	ENSEMBL
G	Crebbp	CREB binding protein		IPI	10	11,598,680	11,724,122	RGD:1581923	RGD
G	Crebbp	CREB binding protein		IPI	10	11,598,680	11,724,122	RGD:1581923	RGD
G	Dgkq	diacylglycerol kinase, theta		IEA	14	1,600,280	1,614,154	RGD:1600115	ENSEMBL
G	Dgkq	diacylglycerol kinase, theta		ISO	14	1,600,280	1,614,154	RGD:1624291	RGD
G	Dhx33	DEAH (Asp-Glu-Ala-His) box polypeptide 33		ISO	10	57,889,929	57,906,392	RGD:1624291	RGD
G	Dhx33	DEAH (Asp-Glu-Ala-His) box polypeptide 33		IEA	10	57,889,929	57,906,392	RGD:1600115	ENSEMBL
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:1581923	RGD
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:1581923	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Gata4	GATA binding protein 4		IPI	15	42,472,793	42,519,569	RGD:727369	BHF-UCL
G	Hand2	heart and neural crest derivatives expressed 2		IPI	16	36,324,327	36,348,104	RGD:727369	BHF-UCL
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		IEA	9	91,147,435	91,389,810	RGD:1600115	ENSEMBL
G	Hdac7	histone deacetylase 7		ISO	7	136,501,738	136,523,073	RGD:1624291	RGD
G	Hnf4a	hepatocyte nuclear factor 4, alpha		ISO	3	154,459,863	154,482,825	RGD:1624291	RGD
G	Hnf4a	hepatocyte nuclear factor 4, alpha		IEA	3	154,459,863	154,482,825	RGD:1600115	ENSEMBL
G	Hspa4	heat shock protein 4		IPI	10	38,705,629	38,749,058	RGD:5686899	RGD
G	Hspa4	heat shock protein 4		IPI	10	38,705,629	38,749,058	RGD:5687155	RGD
G	Klf1	Kruppel-like factor 1 (erythroid)		ISO	19	24,906,887	24,910,058	RGD:1624291	RGD
G	Mef2a	myocyte enhancer factor 2a		ISO				RGD:1624291	RGD
G	Mef2a	myocyte enhancer factor 2a		ISS				RGD:1600115	UniProtKB
G	Mef2a	myocyte enhancer factor 2a		ISO				RGD:1624291	RGD
G	Mef2c	myocyte enhancer factor 2C		ISO	2	12,331,078	12,346,520	RGD:1624291	RGD
G	Mef2d	myocyte enhancer factor 2D		ISO	2	180,221,078	180,246,917	RGD:1624291	RGD
G	Mef2d	myocyte enhancer factor 2D		IEA	2	180,221,078	180,246,917	RGD:1600115	ENSEMBL
G	Pparg	peroxisome proliferator-activated receptor gamma		ISO	4	151,492,220	151,617,331	RGD:1624291	RGD
G	Pparg	peroxisome proliferator-activated receptor gamma		IEA	4	151,492,220	151,617,331	RGD:1600115	ENSEMBL
G	Psip1	PC4 and SFRS1 interacting protein 1		ISO	5	102,304,948	102,336,608	RGD:1624291	RGD
G	Psip1	PC4 and SFRS1 interacting protein 1		IEA	5	102,304,948	102,336,608	RGD:1600115	ENSEMBL
G	Psip1	PC4 and SFRS1 interacting protein 1		ISS	5	102,304,948	102,336,608	RGD:1600115	UniProtKB
G	Psip1	PC4 and SFRS1 interacting protein 1		ISS	5	102,304,948	102,336,608	RGD:1600115	UniProtKB
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		ISO	1	208,262,669	208,273,148	RGD:1624291	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		IEA	1	208,262,669	208,273,148	RGD:1600115	ENSEMBL
G	Smad2	SMAD family member 2		ISO	18	73,180,520	73,241,707	RGD:1624291	RGD
G	Smad2	SMAD family member 2		IEA	18	73,180,520	73,241,707	RGD:1600115	ENSEMBL
G	Taf9	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	2	31,454,557	31,466,611	RGD:1624291	RGD
G	Taf9	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	2	31,454,557	31,466,611	RGD:1624291	RGD
G	Wfs1	Wolfram syndrome 1 (wolframin)		ISO	14	79,379,680	79,404,003	RGD:1624291	RGD
aryl hydrocarbon receptor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arnt	aryl hydrocarbon receptor nuclear translocator		ISO	2	190,333,978	190,391,015	RGD:1624291	RGD
G	Arnt	aryl hydrocarbon receptor nuclear translocator		IEA	2	190,333,978	190,391,015	RGD:1600115	ENSEMBL
G	Arnt2	aryl hydrocarbon receptor nuclear translocator 2		ISO	1	140,535,823	140,646,838	RGD:1624291	RGD
G	Arnt2	aryl hydrocarbon receptor nuclear translocator 2		IEA	1	140,535,823	140,646,838	RGD:1600115	ENSEMBL
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		ISO	1	171,062,181	171,162,426	RGD:1624291	RGD
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		IEA	1	171,062,181	171,162,426	RGD:1600115	ENSEMBL
bHLH transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		ISO	1	171,062,181	171,162,426	RGD:1624291	RGD
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		ISO	1	171,062,181	171,162,426	RGD:1624291	RGD
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		IEA	1	171,062,181	171,162,426	RGD:1600115	ENSEMBL
G	Arntl	aryl hydrocarbon receptor nuclear translocator-like		ISO	1	171,062,181	171,162,426	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)		ISO	7	24,145,578	24,168,494	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)		ISO	7	24,145,578	24,168,494	RGD:1624291	RGD
G	Ascl1	achaete-scute complex homolog 1 (Drosophila)		IEA	7	24,145,578	24,168,494	RGD:1600115	ENSEMBL
G	Bhlhe40	basic helix-loop-helix family, member e40		ISO	4	144,139,486	144,145,186	RGD:1624291	RGD
G	Bhlhe40	basic helix-loop-helix family, member e40		ISO	4	144,139,486	144,145,186	RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:2312273	RGD
G	Hand1	heart and neural crest derivatives expressed 1		ISO	10	43,423,366	43,425,933	RGD:1624291	RGD
G	Hand1	heart and neural crest derivatives expressed 1		ISO	10	43,423,366	43,425,933	RGD:1624291	RGD
G	Hand1	heart and neural crest derivatives expressed 1		IEA	10	43,423,366	43,425,933	RGD:1600115	ENSEMBL
G	Id3	inhibitor of DNA binding 3		TAS	5	154,934,138	154,935,707	RGD:1549435	RGD
G	Isl1	ISL LIM homeobox 1		ISO	2	48,050,124	48,060,394	RGD:1624291	RGD
G	Isl1	ISL LIM homeobox 1		IEA	2	48,050,124	48,060,394	RGD:1600115	ENSEMBL
G	Lmo2	LIM domain only 2		ISO	3	89,356,199	89,367,641	RGD:1624291	RGD
G	Lmo2	LIM domain only 2		IEA	3	89,356,199	89,367,641	RGD:1600115	ENSEMBL
G	Map3k10	mitogen activated protein kinase kinase kinase 10		IEA	1	82,750,424	82,768,725	RGD:1600115	ENSEMBL
G	Map3k10	mitogen activated protein kinase kinase kinase 10		ISO	1	82,750,424	82,768,725	RGD:1624291	RGD
G	Psmd9	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9		IPI	12	34,472,250	34,500,731	RGD:633869	RGD
G	Psmd9	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9		IDA	12	34,472,250	34,500,731	RGD:633869	BHF-UCL
G	Runx2	runt-related transcription factor 2		ISO	9	11,869,234	12,025,219	RGD:1624291	RGD
G	Scx	scleraxis		ISO	7	114,504,701	114,506,719	RGD:1624291	RGD
G	Scx	scleraxis		ISO	7	114,504,701	114,506,719	RGD:1624291	RGD
G	Scx	scleraxis		IEA	7	114,504,701	114,506,719	RGD:1600115	ENSEMBL
G	Sirt1	sirtuin 1		IEA	20	25,675,302	25,686,494	RGD:1600115	ENSEMBL
G	Sirt1	sirtuin 1		ISO	20	25,675,302	25,686,494	RGD:1624291	RGD
G	Sirt1	sirtuin 1		ISO	20	25,675,302	25,686,494	RGD:1624291	RGD
G	Sox9	SRY (sex determining region Y)-box 9		IPI	10	102,392,187	102,394,256		UniProtKB
G	Sp1	Sp1 transcription factor		ISO	7	141,164,180	141,194,509	RGD:1624291	RGD
G	Tcf21	transcription factor 21		ISO	1	23,211,054	23,213,913	RGD:1624291	RGD
G	Tcf21	transcription factor 21		IEA	1	23,211,054	23,213,913	RGD:1600115	ENSEMBL
G	Tcf3	transcription factor 3		IPI	7	10,791,311	10,813,613	RGD:633869	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tcf3	transcription factor 3		IPI	7	10,791,311	10,813,613		UniProtKB
G	Tcf3	transcription factor 3		IPI	7	10,791,311	10,813,613		UniProtKB
G	Tcf4	transcription factor 4		IPI	18	66,135,863	66,359,984		UniProtKB
G	Twist1	twist basic helix-loop-helix transcription factor 1		ISO	6	52,605,869	52,607,863	RGD:1624291	RGD
G	Twist1	twist basic helix-loop-helix transcription factor 1		IEA	6	52,605,869	52,607,863	RGD:1600115	ENSEMBL
G	Ube2i	ubiquitin-conjugating enzyme E2I		IPI	10	14,509,948	14,524,551	RGD:730030	RGD
G	Usf1	upstream transcription factor 1		ISO	13	87,336,705	87,344,466	RGD:1624291	RGD
G	Usf1	upstream transcription factor 1		IEA	13	87,336,705	87,344,466	RGD:1600115	ENSEMBL
G	Usf2	upstream transcription factor 2, c-fos interacting		ISO	1	85,981,897	85,993,346	RGD:1624291	RGD
G	Usf2	upstream transcription factor 2, c-fos interacting		IEA	1	85,981,897	85,993,346	RGD:1600115	ENSEMBL
MRF binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bhlhe40	basic helix-loop-helix family, member e40		ISO	4	144,139,486	144,145,186	RGD:1624291	RGD
G	Bhlhe40	basic helix-loop-helix family, member e40		IEA	4	144,139,486	144,145,186	RGD:1600115	ENSEMBL
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Crebbp	CREB binding protein		IEA	10	11,598,680	11,724,122	RGD:1600115	ENSEMBL
G	Crebbp	CREB binding protein		ISO	10	11,598,680	11,724,122	RGD:1624291	RGD
G	Crebbp	CREB binding protein		ISS	10	11,598,680	11,724,122	RGD:1600115	UniProtKB
G	Kdm1a	lysine (K)-specific demethylase 1A		ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Kdm1a	lysine (K)-specific demethylase 1A		ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Kdm1a	lysine (K)-specific demethylase 1A		IEA	5	155,299,289	155,358,404	RGD:1600115	ENSEMBL
G	Kdm1a	lysine (K)-specific demethylase 1A		IEA	5	155,299,289	155,358,404	RGD:1600115	ENSEMBL
G	Tsc22d3	TSC22 domain family, member 3		ISO	X	128,336,408	128,340,027	RGD:1624291	RGD
G	Tsc22d3	TSC22 domain family, member 3		IEA	X	128,336,408	128,340,027	RGD:1600115	ENSEMBL
NF-kappaB binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ankrd42	ankyrin repeat domain 42		ISO	1	149,425,862	149,468,863	RGD:1624291	RGD
G	Ankrd42	ankyrin repeat domain 42		IEA	1	149,425,862	149,468,863	RGD:1600115	ENSEMBL
G	Apex1	APEX nuclease (multifunctional DNA repair enzyme) 1		IDA	15	26,904,124	26,906,224	RGD:2315672	RGD
G	Bcl10	B-cell CLL/lymphoma 10		ISO	2	244,116,880	244,126,393	RGD:1624291	RGD
G	Bcl10	B-cell CLL/lymphoma 10		ISS	2	244,116,880	244,126,393	RGD:1600115	UniProtKB
G	Brms1	breast cancer metastasis-suppressor 1		ISO	1	207,661,537	207,670,801	RGD:1624291	RGD
G	Cdkn2a	cyclin-dependent kinase inhibitor 2A		ISO	5	108,908,749	108,916,380	RGD:1624291	RGD
G	Commd6	COMM domain containing 6		IEA	15	85,610,757	85,617,333	RGD:1600115	ENSEMBL
G	Commd6	COMM domain containing 6		ISO	15	85,610,757	85,617,333	RGD:1624291	RGD
G	Commd7	COMM domain containing 7		ISO	3	143,997,788	144,012,407	RGD:1624291	RGD
G	Commd7	COMM domain containing 7		IEA	3	143,997,788	144,012,407	RGD:1600115	ENSEMBL
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3		IEA	10	10,984,721	11,009,374	RGD:1600115	ENSEMBL
G	Dnaja3	DnaJ (Hsp40) homolog, subfamily A, member 3		ISO	10	10,984,721	11,009,374	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		IPI	7	119,938,507	120,008,886	RGD:2312270	RGD
G	Faf1	Fas (TNFRSF6) associated factor 1		IEA	5	131,027,463	131,394,549	RGD:1600115	ENSEMBL
G	Faf1	Fas (TNFRSF6) associated factor 1		ISO	5	131,027,463	131,394,549	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta		ISO	11	64,284,731	64,428,698	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta		IEA	11	64,284,731	64,428,698	RGD:1600115	ENSEMBL
G	Hif1an	hypoxia-inducible factor 1, alpha subunit inhibitor		IEA	1	249,607,945	249,618,000	RGD:1600115	ENSEMBL
G	Hif1an	hypoxia-inducible factor 1, alpha subunit inhibitor		ISO	1	249,607,945	249,618,000	RGD:1624291	RGD
G	Hspa1b	heat shock protein 1B		IPI	20	3,955,274	3,957,748	RGD:1598788	RGD
G	Mtdh	metadherin		ISO	7	69,527,182	69,583,015	RGD:1624291	RGD
G	Mtdh	metadherin		ISS	7	69,527,182	69,583,015	RGD:1600115	UniProtKB
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha		IC	6	75,729,302	75,732,475	RGD:2298917	RGD
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha		IC	6	75,729,302	75,732,475	RGD:2298880	RGD
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha		IPI	6	75,729,302	75,732,475	RGD:1598788	RGD
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha		ISO	6	75,729,302	75,732,475	RGD:1624291	RGD
G	Nfkbia	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha		ISO	6	75,729,302	75,732,475	RGD:1624291	RGD
G	Nfkbib	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta		IC	1	83,865,440	83,873,010	RGD:2298917	RGD
G	Nfkbid	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta		ISO	1	85,374,259	85,383,179	RGD:1624291	RGD
G	Nfkbid	nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta		IEA	1	85,374,259	85,383,179	RGD:1600115	ENSEMBL
G	Notch2	notch 2		ISO	2	192,839,350	192,986,589	RGD:1624291	RGD
G	Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)		ISO	10	18,051,990	18,062,714	RGD:1624291	RGD
G	Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)		ISS	10	18,051,990	18,062,714	RGD:1600115	UniProtKB
G	Ppard	peroxisome proliferator-activated receptor delta		IPI	20	6,479,108	6,544,255	RGD:1580656	RGD
G	Psma6	proteasome (prosome, macropain) subunit, alpha type 6		ISO	6	75,649,844	75,667,404	RGD:1624291	RGD
G	Psma6	proteasome (prosome, macropain) subunit, alpha type 6		IEA	6	75,649,844	75,667,404	RGD:1600115	ENSEMBL
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		ISO	1	208,262,669	208,273,148	RGD:1624291	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		IEA	1	208,262,669	208,273,148	RGD:1600115	ENSEMBL
G	Rnf25	ring finger protein 25		IEA	9	73,944,151	73,950,963	RGD:1600115	ENSEMBL
G	Rnf25	ring finger protein 25		ISO	9	73,944,151	73,950,963	RGD:1624291	RGD
G	Rps3	ribosomal protein S3		ISO	1	156,811,470	156,816,770	RGD:1624291	RGD
G	Setd6	SET domain containing 6		IEA	19	9,804,066	9,807,061	RGD:1600115	ENSEMBL
G	Setd6	SET domain containing 6		ISO	19	9,804,066	9,807,061	RGD:1624291	RGD
G	Taf4b	TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa		IEA	18	6,071,848	6,168,486	RGD:1600115	ENSEMBL
G	Taf4b	TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa		ISO	18	6,071,848	6,168,486	RGD:1624291	RGD
G	Tp53bp2	tumor protein p53 binding protein, 2		ISO	13	98,432,144	98,468,555	RGD:1624291	RGD
G	Tp53bp2	tumor protein p53 binding protein, 2		IEA	13	98,432,144	98,468,555	RGD:1600115	ENSEMBL
NFAT protein binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Foxp3	forkhead box P3		IBA	X	26,950,006	26,965,329	RGD:1600115	RefGenome
G	Foxp3	forkhead box P3		ISO	X	26,950,006	26,965,329	RGD:1624291	RGD
G	Gata4	GATA binding protein 4		IPI	15	42,472,793	42,519,569	RGD:5687133	RGD
G	Mapk14	mitogen activated protein kinase 14		ISO	20	6,939,249	7,000,378	RGD:1624291	RGD
G	Mapk14	mitogen activated protein kinase 14		IEA	20	6,939,249	7,000,378	RGD:1600115	ENSEMBL
G	Ppara	peroxisome proliferator activated receptor alpha		IPI	7	123,729,774	123,807,090	RGD:5687133	RGD
G	Spi1	spleen focus forming virus (SFFV) proviral integration oncogene spi1		IEA	3	75,456,353	75,475,722	RGD:1600115	ENSEMBL
repressing transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bmyc	brain expressed myelocytomatosis oncogene		IEA	3	3,864,740	3,865,499	RGD:1600115	ENSEMBL
G	Cbx5	chromobox homolog 5		ISO	7	142,107,922	142,125,543	RGD:1624291	RGD
G	Cbx5	chromobox homolog 5		IEA	7	142,107,922	142,125,543	RGD:1600115	ENSEMBL
G	Ctbp1	C-terminal binding protein 1		ISO	14	83,022,824	83,050,335	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1		ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Gmnn	geminin		ISO	17	47,372,316	47,380,559	RGD:1624291	RGD
G	Gmnn	geminin		IEA	17	47,372,316	47,380,559	RGD:1600115	ENSEMBL
G	Hdac4	histone deacetylase 4		ISO	9	91,147,435	91,389,810	RGD:1624291	RGD
G	Hdac4	histone deacetylase 4		IEA	9	91,147,435	91,389,810	RGD:1600115	ENSEMBL
G	Hdac5	histone deacetylase 5		IEA	10	91,266,512	91,277,705	RGD:1600115	ENSEMBL
G	Hdac5	histone deacetylase 5		ISO	10	91,266,512	91,277,705	RGD:1624291	RGD
G	Hdac7	histone deacetylase 7		ISO	7	136,501,738	136,523,073	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		IEA	6	53,066,308	53,114,402	RGD:1600115	ENSEMBL
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hdac9	histone deacetylase 9		ISO	6	53,066,308	53,114,402	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox		ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hmgb1	high mobility group box 1		ISO				RGD:1624291	RGD
G	Hnf4a	hepatocyte nuclear factor 4, alpha		IPI	3	154,459,863	154,482,825		BHF-UCL
G	Kat5	K(lysine) acetyltransferase 5		ISO	1	208,233,434	208,240,738	RGD:1624291	RGD
G	Kat5	K(lysine) acetyltransferase 5		IEA	1	208,233,434	208,240,738	RGD:1600115	ENSEMBL
G	LOC688090	similar to RT1 class II histocompatibility antigen, B-1 beta chain precursor (RT1.B-beta(1))		IEA				RGD:1600115	ENSEMBL
G	Myc	myelocytomatosis oncogene		ISO	7	98,953,142	98,958,060	RGD:1624291	RGD
G	Nfyb	nuclear transcription factor-Y beta		ISO	7	23,190,295	23,205,611	RGD:1624291	RGD
G	Nfyb	nuclear transcription factor-Y beta		IEA	7	23,190,295	23,205,611	RGD:1600115	ENSEMBL
G	Noc2l	nucleolar complex associated 2 homolog (S. cerevisiae)		ISO	5	173,070,800	173,082,339	RGD:1624291	RGD
G	Noc2l	nucleolar complex associated 2 homolog (S. cerevisiae)		IEA	5	173,070,800	173,082,339	RGD:1600115	ENSEMBL
G	Prdm5	PR domain containing 5		ISO	4	95,448,787	95,620,031	RGD:1624291	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		ISO	1	208,262,669	208,273,148	RGD:1624291	RGD
G	Rela	v-rel reticuloendotheliosis viral oncogene homolog A (avian)		IEA	1	208,262,669	208,273,148	RGD:1600115	ENSEMBL
G	RT1-Bb	RT1 class II, locus Bb		ISO	20	4,730,559	4,736,201	RGD:1624291	RGD
G	Runx1	runt-related transcription factor 1		ISO	11	32,623,461	32,725,404	RGD:1624291	RGD
G	Runx1	runt-related transcription factor 1		IEA	11	32,623,461	32,725,404	RGD:1600115	ENSEMBL
G	Runx2	runt-related transcription factor 2		ISO	9	11,869,234	12,025,219	RGD:1624291	RGD
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tcf3	transcription factor 3		ISO	7	10,791,311	10,813,613	RGD:1624291	RGD
G	Tle4	transducin-like enhancer of split 4 (E(sp1) homolog, Drosophila)		ISO	1	217,636,135	217,770,594	RGD:1624291	RGD
G	Zfp703	zinc finger protein 703		ISO	16	69,405,004	69,409,137	RGD:1624291	RGD
G	Zfp703	zinc finger protein 703		IEA	16	69,405,004	69,409,137	RGD:1600115	ENSEMBL
retinoic acid receptor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Asxl1	additional sex combs like 1		ISO	3	143,703,295	143,767,523	RGD:1624291	RGD
G	Cnot1	CCR4-NOT transcription complex, subunit 1		ISO	19	9,712,024	9,803,182	RGD:1624291	RGD
G	Hmga1	high mobility group AT-hook 1		ISS	20	5,769,052	5,772,269	RGD:1600115	UniProtKB
G	Lrif1	ligand dependent nuclear receptor interacting factor 1		IEA	2	202,141,413	202,156,437	RGD:1600115	InterPro
G	Med1	mediator complex subunit 1		IEA	10	86,917,525	86,959,080	RGD:1600115	ENSEMBL
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med25	mediator complex subunit 25		ISO	1	95,351,526	95,364,403	RGD:1624291	RGD
G	Med25	mediator complex subunit 25		ISO	1	95,351,526	95,364,403	RGD:1624291	RGD
G	Ncoa1	nuclear receptor coactivator 1		IPI	6	27,224,396	27,473,926	RGD:5688233	RGD
G	Ncoa2	nuclear receptor coactivator 2		IPI	5	5,197,891	5,275,776	RGD:5688233	RGD
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Ncor1	nuclear receptor co-repressor 1		IPI	10	48,481,110	48,628,538	RGD:5688233	RGD
G	Ncor2	nuclear receptor co-repressor 2		IPI	12	32,617,643	32,725,753	RGD:5688233	RGD
G	Nr0b2	nuclear receptor subfamily 0, group B, member 2		IPI	5	151,524,685	151,528,000	RGD:633448	RGD
G	Nrip1	nuclear receptor interacting protein 1		ISO	11	15,066,443	15,150,137	RGD:1624291	RGD
G	Nsd1	nuclear receptor binding SET domain protein 1		ISO	17	15,362,482	15,471,961	RGD:1624291	RGD
G	Prmt2	protein arginine methyltransferase 2		ISO	20	12,800,400	12,817,018	RGD:1624291	RGD
G	Prmt2	protein arginine methyltransferase 2		IEA	20	12,800,400	12,817,018	RGD:1600115	ENSEMBL
G	Rxra	retinoid X receptor alpha		IPI	3	6,605,782	6,689,224	RGD:5688233	RGD
G	Rxrb	retinoid X receptor beta		IDA	20	4,954,336	4,960,880	RGD:729677	RGD
G	Snw1	SNW domain containing 1		IEA	6	111,688,742	111,712,826	RGD:1600115	ENSEMBL
G	Snw1	SNW domain containing 1		ISO	6	111,688,742	111,712,826	RGD:1624291	RGD
retinoid X receptor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hmga1	high mobility group AT-hook 1		ISS	20	5,769,052	5,772,269	RGD:1600115	UniProtKB
G	Med25	mediator complex subunit 25		ISO	1	95,351,526	95,364,403	RGD:1624291	RGD
G	Med25	mediator complex subunit 25		IEA	1	95,351,526	95,364,403	RGD:1600115	ENSEMBL
G	Med25	mediator complex subunit 25		IEA	1	95,351,526	95,364,403	RGD:1600115	ENSEMBL
G	Med25	mediator complex subunit 25		ISO	1	95,351,526	95,364,403	RGD:1624291	RGD
G	Ncoa1	nuclear receptor coactivator 1		IPI	6	27,224,396	27,473,926	RGD:5688233	RGD
G	Ncoa2	nuclear receptor coactivator 2		IPI	5	5,197,891	5,275,776	RGD:5688233	RGD
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Ncor1	nuclear receptor co-repressor 1		IPI	10	48,481,110	48,628,538	RGD:5688233	RGD
G	Ncor2	nuclear receptor co-repressor 2		IPI	12	32,617,643	32,725,753	RGD:5688233	RGD
G	Nr0b2	nuclear receptor subfamily 0, group B, member 2		IPI	5	151,524,685	151,528,000	RGD:633448	RGD
G	Nr1h2	nuclear receptor subfamily 1, group H, member 2		IDA	1	95,027,197	95,032,516	RGD:729016	RGD
G	Nr1h2	nuclear receptor subfamily 1, group H, member 2		IPI	1	95,027,197	95,032,516	RGD:61674	RGD
G	Nr1h2	nuclear receptor subfamily 1, group H, member 2		ISO	1	95,027,197	95,032,516	RGD:1624291	RGD
G	Nr1h3	nuclear receptor subfamily 1, group H, member 3		IPI	3	75,542,211	75,550,793	RGD:61675	RGD
G	Nr1h4	nuclear receptor subfamily 1, group H, member 4		ISO	7	26,189,759	26,307,061	RGD:1624291	RGD
G	Nr1h4	nuclear receptor subfamily 1, group H, member 4		IEA	7	26,189,759	26,307,061	RGD:1600115	ENSEMBL
G	Nrip1	nuclear receptor interacting protein 1		ISO	11	15,066,443	15,150,137	RGD:1624291	RGD
G	Nrip1	nuclear receptor interacting protein 1		IEA	11	15,066,443	15,150,137	RGD:1600115	ENSEMBL
G	Nsd1	nuclear receptor binding SET domain protein 1		ISO	17	15,362,482	15,471,961	RGD:1624291	RGD
G	Pparg	peroxisome proliferator-activated receptor gamma		ISO	4	151,492,220	151,617,331	RGD:1624291	RGD
G	Pparg	peroxisome proliferator-activated receptor gamma		IEA	4	151,492,220	151,617,331	RGD:1600115	ENSEMBL
G	Rarb	retinoic acid receptor, beta		IPI				RGD:5688233	RGD
G	Rarg	retinoic acid receptor, gamma		ISO	7	140,991,447	141,014,108	RGD:1624291	RGD
G	Rarg	retinoic acid receptor, gamma		IEA	7	140,991,447	141,014,108	RGD:1600115	ENSEMBL
G	Uimc1	ubiquitin interaction motif containing 1		ISO	17	15,579,709	15,644,888	RGD:1624291	RGD
G	Uimc1	ubiquitin interaction motif containing 1		IEA	17	15,579,709	15,644,888	RGD:1600115	ENSEMBL
G	Vdr	vitamin D (1,25- dihydroxyvitamin D3) receptor		ISO	7	136,567,614	136,617,280	RGD:1624291	RGD
G	Vdr	vitamin D (1,25- dihydroxyvitamin D3) receptor		IEA	7	136,567,614	136,617,280	RGD:1600115	ENSEMBL
RNA polymerase II activating transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Atf2	activating transcription factor 2		ISO	3	56,403,676	56,496,473	RGD:1624291	RGD
G	Atf2	activating transcription factor 2		IEA	3	56,403,676	56,496,473	RGD:1600115	ENSEMBL
G	Bex1	brain expressed, X-linked 1		ISO	X	123,527,737	123,529,133	RGD:1624291	RGD
G	Bhlhe40	basic helix-loop-helix family, member e40		ISO	4	144,139,486	144,145,186	RGD:1624291	RGD
G	Bhlhe40	basic helix-loop-helix family, member e40		IEA	4	144,139,486	144,145,186	RGD:1600115	ENSEMBL
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Bhlhe41	basic helix-loop-helix family, member e41		ISO				RGD:1624291	RGD
G	Cited2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2		ISO	1	12,721,500	12,723,943	RGD:1624291	RGD
G	Cited2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2		IEA	1	12,721,500	12,723,943	RGD:1600115	ENSEMBL
G	Creb1	cAMP responsive element binding protein 1		ISO	9	63,170,785	63,234,727	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1		ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1		IEA	8	125,978,161	125,987,670	RGD:1600115	ENSEMBL
G	Egr2	early growth response 2		ISO	20	21,883,885	21,888,177	RGD:1624291	RGD
G	Egr2	early growth response 2		IEA	20	21,883,885	21,888,177	RGD:1600115	ENSEMBL
G	Eomes	eomesodermin		ISO	8	123,376,689	123,383,451	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Ep300	E1A binding protein p300		IEA	7	119,938,507	120,008,886	RGD:1600115	ENSEMBL
G	Ep300	E1A binding protein p300		IEA	7	119,938,507	120,008,886	RGD:1600115	ENSEMBL
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		IEA	1	27,505,117	27,515,204	RGD:1600115	ENSEMBL
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		ISO	1	27,505,117	27,515,204	RGD:1624291	RGD
G	Hipk2	homeodomain interacting protein kinase 2		ISO	4	66,273,623	66,455,774	RGD:1624291	RGD
G	Isl1	ISL LIM homeobox 1		ISO	2	48,050,124	48,060,394	RGD:1624291	RGD
G	Isl1	ISL LIM homeobox 1		IEA	2	48,050,124	48,060,394	RGD:1600115	ENSEMBL
G	Jun	jun proto-oncogene		ISO	5	115,358,166	115,361,259	RGD:1624291	RGD
G	Jun	jun proto-oncogene		IEA	5	115,358,166	115,361,259	RGD:1600115	ENSEMBL
G	Ldb1	LIM domain binding 1		IEA	1	251,253,305	251,260,850	RGD:1600115	ENSEMBL
G	Ldb1	LIM domain binding 1		ISO	1	251,253,305	251,260,850	RGD:1624291	RGD
G	Lmo2	LIM domain only 2		ISO	3	89,356,199	89,367,641	RGD:1624291	RGD
G	Lmo2	LIM domain only 2		IEA	3	89,356,199	89,367,641	RGD:1600115	ENSEMBL
G	LOC100910833	histone-lysine N-methyltransferase setd3-like		IEA				RGD:1600115	ENSEMBL
G	Mad2l2	MAD2 mitotic arrest deficient-like 2 (yeast)		IEA	5	165,218,362	165,222,828	RGD:1600115	ENSEMBL
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Neurod1	neuronal differentiation 1		ISO	3	62,224,633	62,227,936	RGD:1624291	RGD
G	Neurod1	neuronal differentiation 1		IEA	3	62,224,633	62,227,936	RGD:1600115	ENSEMBL
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		IEA	3	58,366,693	58,394,116	RGD:1600115	ENSEMBL
G	Nfe2l2	nuclear factor, erythroid derived 2, like 2		ISO	3	58,366,693	58,394,116	RGD:1624291	RGD
G	Nhlh2	nescient helix loop helix 2		ISO	2	197,099,516	197,104,854	RGD:1624291	RGD
G	Nhlh2	nescient helix loop helix 2		IEA	2	197,099,516	197,104,854	RGD:1600115	ENSEMBL
G	Pitx2	paired-like homeodomain 2		ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Pitx2	paired-like homeodomain 2		ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1		ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1		ISO	11	2,959,383	2,980,545	RGD:1624291	RGD
G	Pou1f1	POU class 1 homeobox 1		IEA	11	2,959,383	2,980,545	RGD:1600115	ENSEMBL
G	Rb1	retinoblastoma 1		ISO	15	53,828,881	53,962,099	RGD:1624291	RGD
G	Rb1	retinoblastoma 1		IEA	15	53,828,881	53,962,099	RGD:1600115	ENSEMBL
G	Sin3a	SIN3 transcription regulator homolog A (yeast)		IEA	8	60,832,595	60,884,764	RGD:1600115	ENSEMBL
G	Sin3a	SIN3 transcription regulator homolog A (yeast)		ISO	8	60,832,595	60,884,764	RGD:1624291	RGD
G	Smad3	SMAD family member 3		ISO	8	67,803,909	67,952,056	RGD:1624291	RGD
G	Smad3	SMAD family member 3		IEA	8	67,803,909	67,952,056	RGD:1600115	ENSEMBL
G	T	brachyury		IEA	1	46,937,223	46,944,988	RGD:1600115	ENSEMBL
G	T	brachyury		ISO	1	46,937,223	46,944,988	RGD:1624291	RGD
G	T	brachyury		ISO	1	46,937,223	46,944,988	RGD:1624291	RGD
G	Tbx20	T-box 20		ISO	8	24,366,065	24,407,270	RGD:1624291	RGD
G	Tbx20	T-box 20		ISO	8	24,366,065	24,407,270	RGD:1624291	RGD
G	Tbx3	T-box 3		ISO	12	38,155,494	38,166,670	RGD:1624291	RGD
G	Tbx6	T-box 6		ISO	1	185,957,068	185,960,977	RGD:1624291	RGD
G	Tp53bp1	tumor protein p53 binding protein 1		IEA	3	107,994,425	108,071,133	RGD:1600115	ENSEMBL
G	Tp53bp1	tumor protein p53 binding protein 1		ISO	3	107,994,425	108,071,133	RGD:1624291	RGD
G	Zfpm1	zinc finger protein, multitype 1		ISO	19	52,526,720	52,587,089	RGD:1624291	RGD
RNA polymerase II repressing transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Chd4	chromodomain helicase DNA binding protein 4		ISO	4	161,217,964	161,251,018	RGD:1624291	RGD
G	Dmap1	DNA methyltransferase 1-associated protein 1		ISO	5	137,997,648	138,005,652	RGD:1624291	RGD
G	Dmap1	DNA methyltransferase 1-associated protein 1		IEA	5	137,997,648	138,005,652	RGD:1600115	ENSEMBL
G	Gata6	GATA binding protein 6		ISO	18	2,504,264	2,534,648	RGD:1624291	RGD
G	Gsc	goosecoid homeobox		ISO	6	128,526,645	128,528,684	RGD:1624291	RGD
G	Gtf2a1	general transcription factor IIA, 1		ISO	6	115,180,871	115,210,825	RGD:1624291	RGD
G	Gtf2a2	general transcription factor IIA, 2		ISO	8	74,447,866	74,456,735	RGD:1624291	RGD
G	Gtf2a2	general transcription factor IIA, 2		IEA	8	74,447,866	74,456,735	RGD:1600115	ENSEMBL
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac1	histone deacetylase 1		ISO	5	148,672,515	148,699,810	RGD:1624291	RGD
G	Hdac2	histone deacetylase 2		ISO	20	41,162,093	41,186,492	RGD:1624291	RGD
G	Mixl1	Mix paired-like homeobox 1		ISO	13	96,427,597	96,431,628	RGD:1624291	RGD
G	Mixl1	Mix paired-like homeobox 1		ISO	13	96,427,597	96,431,628	RGD:1624291	RGD
G	Mta1	metastasis associated 1		IEA	6	138,118,468	138,143,983	RGD:1600115	ENSEMBL
G	Mta1	metastasis associated 1		ISO	6	138,118,468	138,143,983	RGD:1624291	RGD
G	Mta2	metastasis associated 1 family, member 2		IEA	1	211,618,426	211,627,147	RGD:1600115	ENSEMBL
G	Mta2	metastasis associated 1 family, member 2		ISO	1	211,618,426	211,627,147	RGD:1624291	RGD
G	Ppara	peroxisome proliferator activated receptor alpha		ISO	7	123,729,774	123,807,090	RGD:1624291	RGD
G	Ppara	peroxisome proliferator activated receptor alpha		IEA	7	123,729,774	123,807,090	RGD:1600115	ENSEMBL
G	Rbbp8	retinoblastoma binding protein 8		IEA	18	3,266,565	3,333,153	RGD:1600115	ENSEMBL
G	Rbbp8	retinoblastoma binding protein 8		ISO	18	3,266,565	3,333,153	RGD:1624291	RGD
G	Rbpj	recombination signal binding protein for immunoglobulin kappa J region		ISO				RGD:1624291	RGD
G	Sin3a	SIN3 transcription regulator homolog A (yeast)		IEA	8	60,832,595	60,884,764	RGD:1600115	ENSEMBL
G	Sin3a	SIN3 transcription regulator homolog A (yeast)		ISO	8	60,832,595	60,884,764	RGD:1624291	RGD
G	Sp1	Sp1 transcription factor		ISO	7	141,164,180	141,194,509	RGD:1624291	RGD
G	Stat3	signal transducer and activator of transcription 3 (acute-phase response factor)		IEA	10	89,821,078	89,872,970	RGD:1600115	ENSEMBL
G	Stat3	signal transducer and activator of transcription 3 (acute-phase response factor)		ISO	10	89,821,078	89,872,970	RGD:1624291	RGD
G	Tbp	TATA box binding protein		ISO	1	54,390,756	54,407,563	RGD:1624291	RGD
G	Tbp	TATA box binding protein		IEA	1	54,390,756	54,407,563	RGD:1600115	ENSEMBL
G	Tcerg1	transcription elongation regulator 1		ISO	18	35,716,853	35,778,041	RGD:1624291	RGD
G	Tcf7l2	transcription factor 7-like 2 (T-cell specific, HMG-box)		ISO	1	262,031,823	262,226,710	RGD:1624291	RGD
RNA polymerase II transcription corepressor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Cnot2	CCR4-NOT transcription complex, subunit 2		ISO	7	55,823,982	55,880,812	RGD:1624291	RGD
RNA polymerase II transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ankrd1	ankyrin repeat domain 1		ISO	1	240,316,123	240,324,804	RGD:1624291	RGD
G	Ankrd1	ankyrin repeat domain 1		IEA	1	240,316,123	240,324,804	RGD:1600115	ENSEMBL
G	Ar	androgen receptor		ISO	X	85,949,507	86,119,199	RGD:1624291	RGD
G	Ar	androgen receptor		IEA	X	85,949,507	86,119,199	RGD:1600115	ENSEMBL
G	Crebbp	CREB binding protein		IEA	10	11,598,680	11,724,122	RGD:1600115	ENSEMBL
G	Crebbp	CREB binding protein		ISO	10	11,598,680	11,724,122	RGD:1624291	RGD
G	Dhx9	DEAH (Asp-Glu-Ala-His) box helicase 9		ISO	13	68,471,256	68,507,999	RGD:1624291	RGD
G	Dhx9	DEAH (Asp-Glu-Ala-His) box helicase 9		IEA	13	68,471,256	68,507,999	RGD:1600115	ENSEMBL
G	Ep300	E1A binding protein p300		ISO	7	119,938,507	120,008,886	RGD:1624291	RGD
G	Gata1	GATA binding protein 1		ISO	X	26,564,259	26,572,081	RGD:1624291	RGD
G	Gata1	GATA binding protein 1		ISO	X	26,564,259	26,572,081	RGD:1624291	RGD
G	Gata1	GATA binding protein 1		ISO	X	26,564,259	26,572,081	RGD:1624291	RGD
G	Gfi1b	growth factor independent 1B transcription repressor		IEA	3	7,598,772	7,611,402	RGD:1600115	ENSEMBL
G	Gfi1b	growth factor independent 1B transcription repressor		ISO	3	7,598,772	7,611,402	RGD:1624291	RGD
G	Gsc	goosecoid homeobox		ISO	6	128,526,645	128,528,684	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta		ISO	11	64,284,731	64,428,698	RGD:1624291	RGD
G	Gsk3b	glycogen synthase kinase 3 beta		IEA	11	64,284,731	64,428,698	RGD:1600115	ENSEMBL
G	Hcls1	hematopoietic cell specific Lyn substrate 1		ISO	11	65,619,701	65,643,533	RGD:1624291	RGD
G	Hcls1	hematopoietic cell specific Lyn substrate 1		IEA	11	65,619,701	65,643,533	RGD:1600115	ENSEMBL
G	Hdac5	histone deacetylase 5		ISO	10	91,266,512	91,277,705	RGD:1624291	RGD
G	Hspa4	heat shock protein 4		IPI	10	38,705,629	38,749,058	RGD:5688754	RGD
G	Id4	inhibitor of DNA binding 4		ISO	17	22,525,292	22,527,861	RGD:1624291	RGD
G	Id4	inhibitor of DNA binding 4		IEA	17	22,525,292	22,527,861	RGD:1600115	ENSEMBL
G	Kdm1a	lysine (K)-specific demethylase 1A		ISO	5	155,299,289	155,358,404	RGD:1624291	RGD
G	Kdm1a	lysine (K)-specific demethylase 1A		IEA	5	155,299,289	155,358,404	RGD:1600115	ENSEMBL
G	Klf4	Kruppel-like factor 4 (gut)		ISO	5	73,446,928	73,451,286	RGD:1624291	RGD
G	Klf4	Kruppel-like factor 4 (gut)		ISO	5	73,446,928	73,451,286	RGD:1624291	RGD
G	Klf4	Kruppel-like factor 4 (gut)		IEA	5	73,446,928	73,451,286	RGD:1600115	ENSEMBL
G	Lpin1	lipin 1		ISO	6	40,253,664	40,297,195	RGD:1624291	RGD
G	Lpin1	lipin 1		IEA	6	40,253,664	40,297,195	RGD:1600115	ENSEMBL
G	Mef2a	myocyte enhancer factor 2a		ISO				RGD:1624291	RGD
G	Mixl1	Mix paired-like homeobox 1		ISO	13	96,427,597	96,431,628	RGD:1624291	RGD
G	Mkx	mohawk homeobox		ISO	17	63,631,540	63,710,138	RGD:1624291	RGD
G	Mta2	metastasis associated 1 family, member 2		ISO	1	211,618,426	211,627,147	RGD:1624291	RGD
G	Mtdh	metadherin		ISO	7	69,527,182	69,583,015	RGD:1624291	RGD
G	Mtdh	metadherin		IEA	7	69,527,182	69,583,015	RGD:1600115	ENSEMBL
G	Nfatc1	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1		ISO	18	77,498,654	77,581,231	RGD:1624291	RGD
G	Pitx2	paired-like homeodomain 2		ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Sall1	sal-like 1 (Drosophila)		ISO	19	19,277,337	19,293,298	RGD:1624291	RGD
G	Smad4	SMAD family member 4		ISO	18	70,432,705	70,461,541	RGD:1624291	RGD
G	Spen	spen homolog, transcriptional regulator (Drosophila)		ISO	5	160,359,738	160,414,311	RGD:1624291	RGD
G	Spi1	spleen focus forming virus (SFFV) proviral integration oncogene spi1		IEA	3	75,456,353	75,475,722	RGD:1600115	ENSEMBL
G	Spop	speckle-type POZ protein		ISO	10	84,099,990	84,185,130	RGD:1624291	RGD
G	T	brachyury		ISO	1	46,937,223	46,944,988	RGD:1624291	RGD
G	Tal1	T-cell acute lymphocytic leukemia 1		IEA	5	135,430,985	135,444,692	RGD:1600115	ENSEMBL
G	Tbx18	T-box18		ISO	8	92,984,336	93,012,343	RGD:1624291	RGD
G	Tbx20	T-box 20		ISO	8	24,366,065	24,407,270	RGD:1624291	RGD
G	Tbx20	T-box 20		ISO	8	24,366,065	24,407,270	RGD:1624291	RGD
G	Tbx3	T-box 3		ISO	12	38,155,494	38,166,670	RGD:1624291	RGD
G	Tbx6	T-box 6		ISO	1	185,957,068	185,960,977	RGD:1624291	RGD
G	Tox2	TOX high mobility group box family member 2		IPI	3	154,075,542	154,205,141	RGD:1302820	RGD
G	Tp53	tumor protein p53		ISO	10	56,399,721	56,411,150	RGD:1624291	RGD
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Wwp2	WW domain containing E3 ubiquitin protein ligase 2		ISO	19	37,302,346	37,428,377	RGD:1624291	RGD
G	Zfpm1	zinc finger protein, multitype 1		ISO	19	52,526,720	52,587,089	RGD:1624291	RGD
G	Zfpm1	zinc finger protein, multitype 1		ISO	19	52,526,720	52,587,089	RGD:1624291	RGD
Tat protein binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Actb	actin, beta		ISO	12	12,047,070	12,050,040	RGD:1624291	RGD
G	Actb	actin, beta		IEA	12	12,047,070	12,050,040	RGD:1600115	ENSEMBL
G	Mdfic	MyoD family inhibitor domain containing		IEA	4	41,241,856	41,321,515	RGD:1600115	ENSEMBL
G	Mdfic	MyoD family inhibitor domain containing		ISO	4	41,241,856	41,321,515	RGD:1624291	RGD
G	Mdfic	MyoD family inhibitor domain containing		ISO	4	41,241,856	41,321,515	RGD:1624291	RGD
G	Npm1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)		ISO	10	18,051,990	18,062,714	RGD:1624291	RGD
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		ISO	8	20,720,915	20,812,157	RGD:1624291	RGD
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IEA	8	20,720,915	20,812,157	RGD:1600115	ENSEMBL
G	Smarcb1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1		ISO	20	13,140,331	13,162,437	RGD:1624291	RGD
G	Smarcb1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1		IEA	20	13,140,331	13,162,437	RGD:1600115	ENSEMBL
TBP-class protein binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Brf1	BRF1, RNA polymerase III transcription initiation factor 90 subunit		IEA	6	137,962,953	138,007,641	RGD:1600115	InterPro
G	Cand1	cullin-associated and neddylation-dissociated 1		IDA	7	58,461,205	58,499,092	RGD:634479	RGD
G	Cand2	cullin-associated and neddylation-dissociated 2 (putative)		IDA	4	151,912,174	151,940,734	RGD:634488	RGD
G	Cand2	cullin-associated and neddylation-dissociated 2 (putative)		ISO	4	151,912,174	151,940,734	RGD:1624291	RGD
G	Cand2	cullin-associated and neddylation-dissociated 2 (putative)		IEA	4	151,912,174	151,940,734	RGD:1600115	ENSEMBL
G	Dr1	down-regulator of transcription 1		ISO	14	2,005,938	2,017,291	RGD:1624291	RGD
G	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1		ISO	1	78,711,249	78,722,474	RGD:1624291	RGD
G	Gtf2a1	general transcription factor IIA, 1		ISO	6	115,180,871	115,210,825	RGD:1624291	RGD
G	Gtf2a2	general transcription factor IIA, 2		ISO	8	74,447,866	74,456,735	RGD:1624291	RGD
G	Gtf2a2	general transcription factor IIA, 2		ISO	8	74,447,866	74,456,735	RGD:1624291	RGD
G	Gtf2a2	general transcription factor IIA, 2		IEA	8	74,447,866	74,456,735	RGD:1600115	ENSEMBL
G	Gtf2b	general transcription factor IIB		IEA	2	240,877,342	240,895,650	RGD:1600115	InterPro
G	Hnrnpf	heterogeneous nuclear ribonucleoprotein F		IPI	4	154,207,198	154,228,398	RGD:632913	RGD
G	Psmc1	proteasome (prosome, macropain) 26S subunit, ATPase, 1		IPI	6	124,380,976	124,393,338	RGD:6771232	RGD
G	Psmc2	proteasome (prosome, macropain) 26S subunit, ATPase 2		IPI	4	8,704,100	8,718,351	RGD:6771232	RGD
G	Psmc5	proteasome (prosome, macropain) 26S subunit, ATPase, 5		IPI	10	95,650,987	95,656,921	RGD:6771232	RGD
G	Rnf4	ring finger protein 4		TAS	14	82,092,024	82,112,036	RGD:69969	RGD
G	Taf1	TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	X	89,590,556	89,666,569	RGD:1624291	RGD
G	Thra	thyroid hormone receptor alpha		ISO	10	87,514,443	87,542,306	RGD:1624291	RGD
G	Thra	thyroid hormone receptor alpha		IEA	10	87,514,443	87,542,306	RGD:1600115	ENSEMBL
G	Yeats2	YEATS domain containing 2		IEA	11	82,990,683	83,064,723	RGD:1600115	ENSEMBL
G	Yeats2	YEATS domain containing 2		ISO	11	82,990,683	83,064,723	RGD:1624291	RGD
TFIIB-class transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Tcf4	transcription factor 4		ISO	18	66,135,863	66,359,984	RGD:1624291	RGD
G	Tcf4	transcription factor 4		IEA	18	66,135,863	66,359,984	RGD:1600115	ENSEMBL
TFIID-class transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ercc1	excision repair cross-complementing rodent repair deficiency, complementation group 1		ISO	1	78,711,249	78,722,474	RGD:1624291	RGD
G	Ercc4	excision repair cross-complementing rodent repair deficiency, complementation group 4		ISO	10	2,144,262	2,177,554	RGD:1624291	RGD
TFIIIA-class transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Optn	optineurin		IPI	17	84,298,122	84,348,330	RGD:6480517	RGD
TFIIIC-class transcription factor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Mtor	mechanistic target of rapamycin (serine/threonine kinase)		ISO	5	165,531,402	165,640,899	RGD:1624291	RGD
G	Mtor	mechanistic target of rapamycin (serine/threonine kinase)		IEA	5	165,531,402	165,640,899	RGD:1600115	ENSEMBL
G	Rptor	regulatory associated protein of MTOR, complex 1		ISO	10	109,000,666	109,302,700	RGD:1624291	RGD
thyroid hormone receptor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Gas2l1	growth arrest-specific 2 like 1		IEA	14	85,716,617	85,726,368	RGD:1600115	ENSEMBL
G	Gtf2b	general transcription factor IIB		ISO	2	240,877,342	240,895,650	RGD:1624291	RGD
G	Gtf2b	general transcription factor IIB		IEA	2	240,877,342	240,895,650	RGD:1600115	ENSEMBL
G	Hr	hair growth associated		IPI	15	50,957,053	50,972,842	RGD:1599577	RGD
G	Hr	hair growth associated		IPI	15	50,957,053	50,972,842	RGD:1599577	RGD
G	Med1	mediator complex subunit 1		IDA	10	86,917,525	86,959,080	RGD:5134969	RGD
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Med12	mediator complex subunit 12		IEA	X	89,351,546	89,374,489	RGD:1600115	ENSEMBL
G	Med12	mediator complex subunit 12		ISO	X	89,351,546	89,374,489	RGD:1624291	RGD
G	Med13	mediator complex subunit 13		IEA	10	74,498,274	74,584,128	RGD:1600115	ENSEMBL
G	Med13	mediator complex subunit 13		ISO	10	74,498,274	74,584,128	RGD:1624291	RGD
G	Med14	mediator complex subunit 14		ISO	X	22,116,986	22,205,877	RGD:1624291	RGD
G	Med14	mediator complex subunit 14		IEA	X	22,116,986	22,205,877	RGD:1600115	ENSEMBL
G	Med16	mediator complex subunit 16		IEA	7	11,311,063	11,323,562	RGD:1600115	ENSEMBL
G	Med16	mediator complex subunit 16		ISO	7	11,311,063	11,323,562	RGD:1624291	RGD
G	Med17	mediator complex subunit 17		IEA	8	12,062,713	12,081,709	RGD:1600115	ENSEMBL
G	Med17	mediator complex subunit 17		ISO	8	12,062,713	12,081,709	RGD:1624291	RGD
G	Med24	mediator complex subunit 24		ISO	10	87,477,371	87,502,682	RGD:1624291	RGD
G	Med24	mediator complex subunit 24		IEA	10	87,477,371	87,502,682	RGD:1600115	ENSEMBL
G	Med30	mediator complex subunit 30		IEA	7	88,997,614	89,019,354	RGD:1600115	ENSEMBL
G	Med30	mediator complex subunit 30		ISO	7	88,997,614	89,019,354	RGD:1624291	RGD
G	Med4	mediator complex subunit 4		ISO	15	54,158,386	54,168,660	RGD:1624291	RGD
G	Med4	mediator complex subunit 4		IEA	15	54,158,386	54,168,660	RGD:1600115	ENSEMBL
G	Ncoa2	nuclear receptor coactivator 2		IPI	5	5,197,891	5,275,776	RGD:633360	RGD
G	Ncoa6	nuclear receptor coactivator 6		ISO	3	145,886,874	145,957,928	RGD:1624291	RGD
G	Ncoa6	nuclear receptor coactivator 6		IEA	3	145,886,874	145,957,928	RGD:1600115	ENSEMBL
G	Ncoa6	nuclear receptor coactivator 6		ISS	3	145,886,874	145,957,928	RGD:1600115	UniProtKB
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Ncor1	nuclear receptor co-repressor 1		ISO	10	48,481,110	48,628,538	RGD:1624291	RGD
G	Nr0b2	nuclear receptor subfamily 0, group B, member 2		IPI	5	151,524,685	151,528,000	RGD:633448	RGD
G	Nsd1	nuclear receptor binding SET domain protein 1		ISO	17	15,362,482	15,471,961	RGD:1624291	RGD
G	Nup62	nucleoporin 62		ISO	1	95,288,019	95,303,545	RGD:1624291	RGD
G	Nup62	nucleoporin 62		ISS	1	95,288,019	95,303,545	RGD:1600115	UniProtKB
G	Prmt2	protein arginine methyltransferase 2		ISO	20	12,800,400	12,817,018	RGD:1624291	RGD
G	Prmt2	protein arginine methyltransferase 2		IEA	20	12,800,400	12,817,018	RGD:1600115	ENSEMBL
G	Psmc3ip	PSMC3 interacting protein		IDA	10	90,108,909	90,112,013	RGD:628392	RGD
G	Rxrb	retinoid X receptor beta		IDA	20	4,954,336	4,960,880	RGD:729677	RGD
G	Taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	20	6,113,417	6,119,513	RGD:1624291	RGD
G	Taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IEA	20	6,113,417	6,119,513	RGD:1600115	ENSEMBL
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IEA	18	30,541,432	30,543,580	RGD:1600115	ENSEMBL
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	18	30,541,432	30,543,580	RGD:1624291	RGD
G	Thrap3	thyroid hormone receptor associated protein 3		ISO	5	145,522,324	145,564,573	RGD:1624291	RGD
G	Trip12	thyroid hormone receptor interactor 12		ISO	9	83,961,411	84,085,077	RGD:1624291	RGD
transcription corepressor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Fam89b	family with sequence similarity 89, member B		ISO	1	208,355,217	208,356,772	RGD:1624291	RGD
G	Hdgf	hepatoma-derived growth factor		ISO	2	179,981,346	179,991,892	RGD:1624291	RGD
G	Phf12	PHD finger protein 12		ISO	10	64,024,531	64,074,458	RGD:1624291	RGD
vitamin D receptor binding
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Baz1b	bromodomain adjacent to zinc finger domain, 1B		IEA	12	22,586,411	22,644,378	RGD:1600115	ENSEMBL
G	Baz1b	bromodomain adjacent to zinc finger domain, 1B		ISO	12	22,586,411	22,644,378	RGD:1624291	RGD
G	Hr	hair growth associated		IPI	15	50,957,053	50,972,842	RGD:1599578	RGD
G	Med1	mediator complex subunit 1		IDA	10	86,917,525	86,959,080	RGD:5133443	RGD
G	Med1	mediator complex subunit 1		ISO	10	86,917,525	86,959,080	RGD:1624291	RGD
G	Rxra	retinoid X receptor alpha		ISO	3	6,605,782	6,689,224	RGD:1624291	RGD
G	Rxra	retinoid X receptor alpha		IEA	3	6,605,782	6,689,224	RGD:1600115	ENSEMBL
G	Rxrb	retinoid X receptor beta		IDA	20	4,954,336	4,960,880	RGD:729677	RGD
G	Snw1	SNW domain containing 1		IEA	6	111,688,742	111,712,826	RGD:1600115	ENSEMBL
G	Snw1	SNW domain containing 1		ISO	6	111,688,742	111,712,826	RGD:1624291	RGD
G	Taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	20	6,113,417	6,119,513	RGD:1624291	RGD
G	Taf11	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IEA	20	6,113,417	6,119,513	RGD:1600115	ENSEMBL
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		IEA	18	30,541,432	30,543,580	RGD:1600115	ENSEMBL
G	Taf7	TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor		ISO	18	30,541,432	30,543,580	RGD:1624291	RGD
G	Tob2	transducer of ERBB2, 2		ISO	7	120,200,815	120,209,535	RGD:1624291	RGD
G	Tob2	transducer of ERBB2, 2		IEA	7	120,200,815	120,209,535	RGD:1600115	ENSEMBL

Term paths to the root

Path 1
Term	Annotations
molecular_function	87786
binding	56523
protein binding	39031
transcription factor binding	1003
NF-kappaB binding	48
NFAT protein binding	7
RNA polymerase I transcription factor binding	0
RNA polymerase II transcription factor binding +	151
RNA polymerase III transcription factor binding +	4
TBP-class protein binding +	22
Tat protein binding	10
activating transcription factor binding +	101
aryl hydrocarbon receptor binding	6
bHLH transcription factor binding +	64
repressing transcription factor binding +	73
retinoic acid receptor binding +	52
thyroid hormone receptor binding	44
transcription cofactor binding +	4
vitamin D receptor binding	16