ONTOLOGY REPORT - ANNOTATIONS

Term:mRNA polyadenylation
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Accession:GO:0006378 term browser browse the term
Definition:The enzymatic addition of a sequence of 40-200 adenylyl residues at the 3' end of a eukaryotic mRNA primary transcript.
Synonyms:exact_synonym: mRNA polyadenylylation
 narrow_synonym: cleavage and polyadenylylation specificity factor activity

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mRNA polyadenylation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Ahcyl1 adenosylhomocysteinase-like 1 GBrowse link ISO 2 203,210,376 203,244,218 RGD:1624291 RGD
G Ahcyl1 adenosylhomocysteinase-like 1 GBrowse link IEA 2 203,210,376 203,244,218 RGD:1600115 ENSEMBL
G Aplp1 amyloid beta (A4) precursor-like protein 1 GBrowse link ISO 1 85,390,217 85,401,952 RGD:1624291 RGD
G App amyloid beta (A4) precursor protein GBrowse link ISO 11 24,457,855 24,693,851 RGD:1624291 RGD
G App amyloid beta (A4) precursor protein GBrowse link ISS 11 24,457,855 24,693,851 RGD:1600115 UniProtKB
G Cdc73 cell division cycle 73 GBrowse link IEA 13 57,441,674 57,534,385 RGD:1600115 ENSEMBL
G Cdc73 cell division cycle 73 GBrowse link ISO 13 57,441,674 57,534,385 RGD:1624291 RGD
G Cdc73 cell division cycle 73 GBrowse link ISS 13 57,441,674 57,534,385 RGD:1600115 UniProtKB
G Cpsf1 cleavage and polyadenylation specific factor 1, 160kDa GBrowse link ISO 7 114,647,975 114,658,568 RGD:1624291 RGD
G Cpsf1 cleavage and polyadenylation specific factor 1, 160kDa GBrowse link IEA 7 114,647,975 114,658,568 RGD:1600115 ENSEMBL
G Cpsf2 cleavage and polyadenylation specific factor 2, 100kDa GBrowse link IEA 6 126,246,237 126,274,144 RGD:1600115 InterPro
G Cpsf6 cleavage and polyadenylation specific factor 6, 68kDa GBrowse link ISO 7 56,658,291 56,689,892 RGD:1624291 RGD
G Leo1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link ISO 8 80,266,160 80,290,547 RGD:1624291 RGD
G Leo1 Leo1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) GBrowse link ISS 8 80,266,160 80,290,547 RGD:1600115 UniProtKB
G Mtpap mitochondrial poly(A) polymerase GBrowse link IEA 17 61,847,984 61,868,867 RGD:1600115 ENSEMBL
G Mtpap mitochondrial poly(A) polymerase GBrowse link ISO 17 61,847,984 61,868,867 RGD:1624291 RGD
G Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 GBrowse link ISO 19 11,412,732 11,428,838 RGD:1624291 RGD
G Nudt21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 GBrowse link ISS 19 11,412,732 11,428,838 RGD:1600115 UniProtKB
G Paf1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) GBrowse link ISO 1 83,501,213 83,506,791 RGD:1624291 RGD
G Paf1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) GBrowse link ISS 1 83,501,213 83,506,791 RGD:1600115 UniProtKB
G Papola poly (A) polymerase alpha GBrowse link IBA 6 129,936,041 129,988,481 RGD:1600115 RefGenome
G Papolg poly(A) polymerase gamma GBrowse link IBA 14 104,800,058 104,833,509 RGD:1600115 RefGenome
G Ssu72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) GBrowse link ISS 5 172,560,734 172,591,202 RGD:1600115 UniProtKB
G Ssu72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) GBrowse link ISO 5 172,560,734 172,591,202 RGD:1624291 RGD
G Sympk symplekin GBrowse link ISO 1 78,377,890 78,407,581 RGD:1624291 RGD
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific GBrowse link ISS 1 211,629,025 211,640,008 RGD:1600115 UniProtKB
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific GBrowse link ISO 1 211,629,025 211,640,008 RGD:1624291 RGD
G Tut1 terminal uridylyl transferase 1, U6 snRNA-specific GBrowse link ISO 1 211,629,025 211,640,008 RGD:1624291 RGD
G Zc3h3 zinc finger CCCH type containing 3 GBrowse link IEA 7 113,714,123 113,813,124 RGD:1600115 ENSEMBL
G Zc3h3 zinc finger CCCH type containing 3 GBrowse link ISO 7 113,714,123 113,813,124 RGD:1624291 RGD
mitochondrial mRNA polyadenylation term browser
Symbol Object Name GBrowse Evidence Chr Start Stop Reference Source
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 GBrowse link IEA 14 110,130,417 110,161,762 RGD:1600115 ENSEMBL
G Pnpt1 polyribonucleotide nucleotidyltransferase 1 GBrowse link ISO 14 110,130,417 110,161,762 RGD:1624291 RGD
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 136531
    cellular process 85606
      cellular metabolic process 30527
        cellular macromolecule metabolic process 21896
          RNA metabolic process 10231
            RNA processing 942
              mRNA processing 428
                mRNA 3'-end processing 76
                  mRNA polyadenylation 32
                    mitochondrial mRNA polyadenylation 2
                    negative regulation of mRNA polyadenylation 0
                    positive regulation of mRNA polyadenylation 0
                    regulation of mRNA polyadenylation + 0
Path 2
Term Annotations click to browse term
  biological_process 136531
    cellular process 85606
      cellular metabolic process 30527
        cellular nitrogen compound metabolic process 15325
          nucleobase-containing compound metabolic process 14486
            nucleic acid metabolic process 12512
              RNA metabolic process 10231
                RNA processing 942
                  mRNA processing 428
                    mRNA 3'-end processing 76
                      mRNA polyadenylation 32
                        mitochondrial mRNA polyadenylation 2
                        negative regulation of mRNA polyadenylation 0
                        positive regulation of mRNA polyadenylation 0
                        regulation of mRNA polyadenylation + 0
paths to the root

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