ONTOLOGY REPORT - ANNOTATIONS

Term:DNA recombination
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Accession:GO:0006310 term browser browse the term
Definition:Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.

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DNA recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Apex1 APEX nuclease (multifunctional DNA repair enzyme) 1 GBrowse link IEA 15 26,904,124 26,906,224 RGD:1600115 UniProtKB
G Blm Bloom syndrome, RecQ helicase-like GBrowse link IEA 1 136,271,573 136,358,077 RGD:1600115 InterPro
G Brca1 breast cancer 1, early onset GBrowse link IEA 10 90,513,630 90,572,676 RGD:1600115 UniProtKB
G Brca2 breast cancer 2, early onset GBrowse link IDA 12 4,282,952 4,323,693 RGD:632363 RGD
G Dclre1c DNA cross-link repair 1C GBrowse link ISO 17 85,896,581 85,928,644 RGD:1624291 RGD
G Dclre1c DNA cross-link repair 1C GBrowse link IEA 17 85,896,581 85,928,644 RGD:1600115 ENSEMBL
G Eid3 EP300 interacting inhibitor of differentiation 3 GBrowse link IEA 7 23,085,569 23,086,894 RGD:1600115 UniProtKB
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 GBrowse link ISO 1 78,711,249 78,722,474 RGD:1624291 RGD
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 GBrowse link ISO 1 78,711,249 78,722,474 RGD:1624291 RGD
G Exo1 exonuclease 1 GBrowse link ISO 13 91,619,024 91,644,366 RGD:1624291 RGD
G Ino80c INO80 complex subunit C GBrowse link IEA 18 15,863,573 15,878,207 RGD:1600115 UniProtKB
G Ino80e INO80 complex subunit E GBrowse link IEA 1 186,030,837 186,041,424 RGD:1600115 UniProtKB
G Lig1 ligase I, DNA, ATP-dependent GBrowse link IEA 1 73,728,892 73,767,429 RGD:1600115 UniProtKB
G Lig3 ligase III, DNA, ATP-dependent GBrowse link IEA 10 71,000,287 71,021,398 RGD:1600115 UniProtKB
G LOC100911727 DNA ligase 1-like IEA RGD:1600115 UniProtKB
G Mus81 MUS81 structure-specific endonuclease GBrowse link IEA 1 208,126,545 208,131,820 RGD:1600115 UniProtKB
G Nhej1 nonhomologous end-joining factor 1 GBrowse link IEA 9 74,309,152 74,408,397 RGD:1600115 InterPro
G Nono non-POU domain containing, octamer-binding GBrowse link IEA X 89,502,318 89,520,178 RGD:1600115 UniProtKB
G Nsmce1 non-SMC element 1 homolog (S. cerevisiae) GBrowse link IEA 1 184,528,343 184,553,824 RGD:1600115 UniProtKB
G Psmc3ip PSMC3 interacting protein GBrowse link IEA 10 90,108,909 90,112,013 RGD:1600115 UniProtKB
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link ISO 10 39,112,733 39,164,694 RGD:1624291 RGD
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link IEA 10 39,112,733 39,164,694 RGD:1600115 ENSEMBL
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link ISS 10 39,112,733 39,164,694 RGD:1600115 UniProtKB
G Rad51ap1 RAD51 associated protein 1 GBrowse link ISO 4 163,308,788 163,321,854 RGD:1624291 RGD
G Rad51ap1 RAD51 associated protein 1 GBrowse link IEA 4 163,308,788 163,321,854 RGD:1600115 ENSEMBL
G Rad51c Rad51 homolog c (S. cerevisiae) GBrowse link ISO 10 75,692,205 75,718,369 RGD:1624291 RGD
G Rad52 RAD52 homolog (S. cerevisiae) GBrowse link IEA 4 156,281,973 156,295,238 RGD:1600115 InterPro
G Rag1 recombination activating gene 1 GBrowse link TAS 3 86,780,782 86,791,878 RGD:2290270 MGI
G Rdm1 RAD52 motif 1 GBrowse link IEA 10 90,659,199 90,669,362 RGD:1600115 InterPro
G Recql RecQ protein-like (DNA helicase Q1-like) GBrowse link IEA 4 179,927,255 179,951,742 RGD:1600115 InterPro
G Recql4 RecQ protein-like 4 GBrowse link IEA 7 114,752,863 114,760,027 RGD:1600115 InterPro
G Recql5 RecQ protein-like 5 GBrowse link IEA 10 106,000,185 106,039,287 RGD:1600115 InterPro
G Rpa2 replication protein A2 GBrowse link IEA 5 152,369,550 152,380,370 RGD:1600115 UniProtKB
G Rpain RPA interacting protein GBrowse link ISO 10 57,874,557 57,881,526 RGD:1624291 RGD
G Rpain RPA interacting protein GBrowse link IEA 10 57,874,557 57,881,526 RGD:1600115 ENSEMBL
G Ruvbl1 RuvB-like 1 (E. coli) GBrowse link IEA 4 122,556,857 122,591,769 RGD:1600115 UniProtKB
G Slc50a1 solute carrier family 50 (sugar transporter), member 1 GBrowse link IEA 2 181,440,905 181,443,285 RGD:1600115 InterPro
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) GBrowse link IEA 1 185,843,372 185,848,919 RGD:1600115 UniProtKB
G Smc1a structural maintenance of chromosomes 1A GBrowse link IEA X 41,503,393 41,547,830 RGD:1600115 InterPro
G Smc1b structural maintenance of chromosomes 1B GBrowse link IEA 7 123,078,896 123,140,078 RGD:1600115 InterPro
G Smc2 structural maintenance of chromosomes 2 GBrowse link IEA 5 69,561,142 69,607,373 RGD:1600115 InterPro
G Smc4 structural maintenance of chromosomes 4 GBrowse link IEA 2 158,987,318 159,015,705 RGD:1600115 InterPro
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) GBrowse link IEA 20 29,681,431 29,714,796 RGD:1600115 ENSEMBL
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) GBrowse link ISO 20 29,681,431 29,714,796 RGD:1624291 RGD
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) GBrowse link ISS 20 29,681,431 29,714,796 RGD:1600115 UniProtKB
G Tfpt TCF3 (E2A) fusion partner GBrowse link IEA 1 63,901,368 63,910,301 RGD:1600115 UniProtKB
G Wrn Werner syndrome, RecQ helicase-like GBrowse link IEA 16 62,535,144 62,668,700 RGD:1600115 InterPro
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 GBrowse link IEA 9 71,472,459 71,581,936 RGD:1600115 InterPro
DNA ligation involved in DNA recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link IEA 16 84,881,880 84,888,448 RGD:1600115 ENSEMBL
double-strand break repair via homologous recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Ap5s1 adaptor-related protein complex 5, sigma 1 subunit GBrowse link IEA 3 118,916,234 118,919,526 RGD:1600115 ENSEMBL
G Ap5s1 adaptor-related protein complex 5, sigma 1 subunit GBrowse link ISO 3 118,916,234 118,919,526 RGD:1624291 RGD
G Brca1 breast cancer 1, early onset GBrowse link ISO 10 90,513,630 90,572,676 RGD:1624291 RGD
G Brca2 breast cancer 2, early onset GBrowse link ISO 12 4,282,952 4,323,693 RGD:1624291 RGD
G Brca2 breast cancer 2, early onset GBrowse link ISO 12 4,282,952 4,323,693 RGD:1624291 RGD
G Brca2 breast cancer 2, early onset GBrowse link ISS 12 4,282,952 4,323,693 RGD:1600115 UniProtKB
G Brca2 breast cancer 2, early onset GBrowse link IBA 12 4,282,952 4,323,693 RGD:1600115 RefGenome
G Brca2 breast cancer 2, early onset GBrowse link IEA 12 4,282,952 4,323,693 RGD:1600115 ENSEMBL
G Brca2 breast cancer 2, early onset GBrowse link IEA 12 4,282,952 4,323,693 RGD:1600115 ENSEMBL
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 GBrowse link IBA 10 2,144,262 2,177,554 RGD:1600115 RefGenome
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 GBrowse link ISO 10 2,144,262 2,177,554 RGD:1624291 RGD
G Fan1 FANCD2/FANCI-associated nuclease 1 GBrowse link IEA 1 118,784,938 118,811,928 RGD:1600115 ENSEMBL
G Fan1 FANCD2/FANCI-associated nuclease 1 GBrowse link ISO 1 118,784,938 118,811,928 RGD:1624291 RGD
G Fan1 FANCD2/FANCI-associated nuclease 1 GBrowse link ISO 1 118,784,938 118,811,928 RGD:1624291 RGD
G H2afx H2A histone family, member X GBrowse link ISO 8 47,312,609 47,313,938 RGD:1624291 RGD
G H2afx H2A histone family, member X GBrowse link IEA 8 47,312,609 47,313,938 RGD:1600115 ENSEMBL
G Hus1 HUS1 checkpoint homolog (S. pombe) GBrowse link ISO 14 89,527,997 89,542,730 RGD:1624291 RGD
G Hus1 HUS1 checkpoint homolog (S. pombe) GBrowse link IEA 14 89,527,997 89,542,730 RGD:1600115 ENSEMBL
G Ino80 INO80 homolog (S. cerevisiae) GBrowse link ISO 3 105,898,279 105,979,698 RGD:1624291 RGD
G Kiaa0415 KIAA0415 protein GBrowse link IEA 12 12,490,951 12,505,621 RGD:1600115 ENSEMBL
G LOC100360113 mortality factor 4 like 1-like GBrowse link ISO 8 95,006,476 95,027,439 RGD:1624291 RGD
G LOC100911267 DNA repair protein RAD51 homolog 1-like IEA RGD:1600115 ENSEMBL
G LOC688631 similar to DNA repair endonuclease XPF (DNA excision repair protein ERCC-4) GBrowse link IBA 10 890,868 1,227,048 RGD:1600115 RefGenome
G Mcm8 minichromosome maintenance complex component 8 GBrowse link ISS 3 120,614,429 120,644,673 RGD:1600115 UniProtKB
G Mcm8 minichromosome maintenance complex component 8 GBrowse link ISO 3 120,614,429 120,644,673 RGD:1624291 RGD
G Mcmdc1 minichromosome maintenance deficient domain containing 1 ISS RGD:1600115 UniProtKB
G Mms22l MMS22-like, DNA repair protein GBrowse link ISO 5 39,528,968 39,645,371 RGD:1624291 RGD
G Mms22l MMS22-like, DNA repair protein GBrowse link ISO 5 39,528,968 39,645,371 RGD:1624291 RGD
G Mms22l MMS22-like, DNA repair protein GBrowse link ISO 5 39,528,968 39,645,371 RGD:1624291 RGD
G Morf4l1 mortality factor 4 like 1 GBrowse link ISS 13 91,235,625 91,237,345 RGD:1600115 UniProtKB
G Nabp1 nucleic acid binding protein 1 GBrowse link ISO 9 47,194,891 47,201,876 RGD:1624291 RGD
G Nabp1 nucleic acid binding protein 1 GBrowse link ISS 9 47,194,891 47,201,876 RGD:1600115 UniProtKB
G Nabp2 nucleic acid binding protein 2 GBrowse link ISO 7 1,693,100 1,698,698 RGD:1624291 RGD
G Nabp2 nucleic acid binding protein 2 GBrowse link ISS 7 1,693,100 1,698,698 RGD:1600115 UniProtKB
G Nsmce2 non-SMC element 2, MMS21 homolog (S. cerevisiae) GBrowse link ISO 7 96,167,635 96,393,594 RGD:1624291 RGD
G Nsmce2 non-SMC element 2, MMS21 homolog (S. cerevisiae) GBrowse link ISS 7 96,167,635 96,393,594 RGD:1600115 UniProtKB
G Palb2 partner and localizer of BRCA2 GBrowse link ISO 1 180,928,710 180,952,518 RGD:1624291 RGD
G Palb2 partner and localizer of BRCA2 GBrowse link ISO 1 180,928,710 180,952,518 RGD:1624291 RGD
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 GBrowse link ISO 3 43,660,136 43,699,412 RGD:1624291 RGD
G Psmd14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 GBrowse link IEA 3 43,660,136 43,699,412 RGD:1600115 ENSEMBL
G Rad51 RAD51 homolog (S. cerevisiae) GBrowse link ISO 3 105,625,265 105,650,392 RGD:1624291 RGD
G Rad51 RAD51 homolog (S. cerevisiae) GBrowse link ISO 3 105,625,265 105,650,392 RGD:1624291 RGD
G Rad51 RAD51 homolog (S. cerevisiae) GBrowse link ISO 3 105,625,265 105,650,392 RGD:1624291 RGD
G Rad52 RAD52 homolog (S. cerevisiae) GBrowse link ISO 4 156,281,973 156,295,238 RGD:1624291 RGD
G Rad54b RAD54 homolog B (S. cerevisiae) GBrowse link ISO 5 25,830,524 25,899,650 RGD:1624291 RGD
G Rad54l RAD54 like (S. cerevisiae) ISO RGD:1624291 RGD
G Rad54l RAD54 like (S. cerevisiae) IEA RGD:1600115 ENSEMBL
G Rbbp8 retinoblastoma binding protein 8 GBrowse link ISS 18 3,266,565 3,333,153 RGD:1600115 UniProtKB
G Rbbp8 retinoblastoma binding protein 8 GBrowse link ISO 18 3,266,565 3,333,153 RGD:1624291 RGD
G Rpa1 replication protein A1 GBrowse link ISO 10 62,613,169 62,656,565 RGD:1624291 RGD
G Rpa1 replication protein A1 GBrowse link IEA 10 62,613,169 62,656,565 RGD:1600115 ENSEMBL
G Sfr1 SWI5-dependent recombination repair 1 GBrowse link ISO 1 253,079,656 253,105,342 RGD:1624291 RGD
G Sfr1 SWI5-dependent recombination repair 1 GBrowse link ISO 1 253,079,656 253,105,342 RGD:1624291 RGD
G Sfr1 SWI5-dependent recombination repair 1 GBrowse link ISS 1 253,079,656 253,105,342 RGD:1600115 UniProtKB
G Shfm1 split hand/foot malformation (ectrodactyly) type 1 GBrowse link ISO 4 31,316,084 31,336,240 RGD:1624291 RGD
G Shfm1 split hand/foot malformation (ectrodactyly) type 1 GBrowse link IEA 4 31,316,084 31,336,240 RGD:1600115 ENSEMBL
G Slx1b SLX1 structure-specific endonuclease subunit homolog B (S. cerevisiae) GBrowse link ISO 1 185,843,372 185,848,919 RGD:1624291 RGD
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) GBrowse link ISO 10 11,778,216 11,816,839 RGD:1624291 RGD
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) GBrowse link ISO 10 11,778,216 11,816,839 RGD:1624291 RGD
G Smc5 structural maintenance of chromosomes 5 GBrowse link IEA 1 226,494,137 226,566,143 RGD:1600115 ENSEMBL
G Smc5 structural maintenance of chromosomes 5 GBrowse link ISO 1 226,494,137 226,566,143 RGD:1624291 RGD
G Smc6 structural maintenance of chromosomes 6 GBrowse link IEA 6 34,710,177 34,763,158 RGD:1600115 InterPro
G Swi5 SWI5 recombination repair homolog (yeast) GBrowse link ISO 3 11,402,738 11,411,870 RGD:1624291 RGD
G Swi5 SWI5 recombination repair homolog (yeast) GBrowse link ISO 3 11,402,738 11,411,870 RGD:1624291 RGD
G Swi5 SWI5 recombination repair homolog (yeast) GBrowse link ISS 3 11,402,738 11,411,870 RGD:1600115 UniProtKB
G Swsap1 SWIM-type zinc finger 7 associated protein 1 GBrowse link IEA 8 21,058,317 21,060,845 RGD:1600115 ENSEMBL
G Swsap1 SWIM-type zinc finger 7 associated protein 1 GBrowse link ISO 8 21,058,317 21,060,845 RGD:1624291 RGD
G Tonsl tonsoku-like, DNA repair protein GBrowse link ISS 7 114,674,549 114,689,284 RGD:1600115 UniProtKB
G Tonsl tonsoku-like, DNA repair protein GBrowse link ISO 7 114,674,549 114,689,284 RGD:1624291 RGD
G Tonsl tonsoku-like, DNA repair protein GBrowse link ISO 7 114,674,549 114,689,284 RGD:1624291 RGD
G Tonsl tonsoku-like, DNA repair protein GBrowse link ISO 7 114,674,549 114,689,284 RGD:1624291 RGD
G Ube2n ubiquitin-conjugating enzyme E2N GBrowse link ISO 7 32,719,959 32,750,002 RGD:1624291 RGD
G Xrcc2 X-ray repair complementing defective repair in Chinese hamster cells 2 GBrowse link ISO 4 4,817,222 4,835,725 RGD:1624291 RGD
G Xrcc2 X-ray repair complementing defective repair in Chinese hamster cells 2 GBrowse link IEA 4 4,817,222 4,835,725 RGD:1600115 ENSEMBL
G Yy1 YY1 transcription factor GBrowse link ISO 6 133,132,419 133,156,686 RGD:1624291 RGD
G Yy1 YY1 transcription factor GBrowse link IEA 6 133,132,419 133,156,686 RGD:1600115 ENSEMBL
G Zfyve26 zinc finger, FYVE domain containing 26 GBrowse link IEA 6 101,999,868 102,065,689 RGD:1600115 ENSEMBL
G Zfyve26 zinc finger, FYVE domain containing 26 GBrowse link ISO 6 101,999,868 102,065,689 RGD:1624291 RGD
G Zswim7 zinc finger, SWIM-type containing 7 GBrowse link ISO 10 48,438,718 48,450,809 RGD:1624291 RGD
immunoglobulin V(D)J recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Foxp1 forkhead box P1 GBrowse link ISO 4 133,773,373 134,007,018 RGD:1624291 RGD
G Foxp1 forkhead box P1 GBrowse link IBA 4 133,773,373 134,007,018 RGD:1600115 RefGenome
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link IEA 16 84,881,880 84,888,448 RGD:1600115 ENSEMBL
G Prkdc protein kinase, DNA activated, catalytic polypeptide GBrowse link ISO 11 86,951,420 87,169,229 RGD:1624291 RGD
G Tcf3 transcription factor 3 GBrowse link ISO 7 10,791,311 10,813,613 RGD:1624291 RGD
G Tcf3 transcription factor 3 GBrowse link ISO 7 10,791,311 10,813,613 RGD:1624291 RGD
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 GBrowse link ISO 2 19,904,490 20,158,358 RGD:1624291 RGD
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 GBrowse link IEA 2 19,904,490 20,158,358 RGD:1600115 ENSEMBL
interleukin-4-dependent isotype switching to IgE isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Tnfsf4 tumor necrosis factor (ligand) superfamily, member 4 GBrowse link ISO 13 77,026,337 77,050,223 RGD:1624291 RGD
G Tnfsf4 tumor necrosis factor (ligand) superfamily, member 4 GBrowse link IEA 13 77,026,337 77,050,223 RGD:1600115 ENSEMBL
isotype switching term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G aicda activation-induced cytidine deaminase GBrowse link ISO 4 159,006,328 159,017,501 RGD:1624291 RGD
G aicda activation-induced cytidine deaminase GBrowse link IEA 4 159,006,328 159,017,501 RGD:1600115 ENSEMBL
G Batf basic leucine zipper transcription factor, ATF-like GBrowse link ISS 6 109,793,076 109,817,614 RGD:1600115 UniProtKB
G Batf basic leucine zipper transcription factor, ATF-like GBrowse link ISO 6 109,793,076 109,817,614 RGD:1624291 RGD
G Batf basic leucine zipper transcription factor, ATF-like GBrowse link ISO 6 109,793,076 109,817,614 RGD:1624291 RGD
G Cd40lg CD40 ligand GBrowse link ISO X 141,925,019 141,937,183 RGD:1624291 RGD
G Cd40lg CD40 ligand GBrowse link IEA X 141,925,019 141,937,183 RGD:1600115 ENSEMBL
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 GBrowse link ISO 1 78,711,249 78,722,474 RGD:1624291 RGD
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 GBrowse link IEA 1 78,711,249 78,722,474 RGD:1600115 ENSEMBL
G Exo1 exonuclease 1 GBrowse link ISO 13 91,619,024 91,644,366 RGD:1624291 RGD
G Exosc3 exosome component 3 GBrowse link ISO 5 61,880,622 61,883,825 RGD:1624291 RGD
G Exosc6 exosome component 6 GBrowse link ISO 19 40,975,037 40,976,299 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link IEA 16 84,881,880 84,888,448 RGD:1600115 ENSEMBL
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link IEA 8 115,616,396 115,653,471 RGD:1600115 ENSEMBL
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link IEA 6 11,199,906 11,258,350 RGD:1600115 ENSEMBL
G Msh2 mutS homolog 2 (E. coli) GBrowse link IBA 6 11,199,906 11,258,350 RGD:1600115 RefGenome
G Msh6 mutS homolog 6 (E. coli) GBrowse link ISO 6 11,525,292 11,542,592 RGD:1624291 RGD
G Nbn nibrin GBrowse link ISO 5 30,541,610 30,576,168 RGD:1624291 RGD
G Nbn nibrin GBrowse link IEA 5 30,541,610 30,576,168 RGD:1600115 ENSEMBL
G Nbn nibrin GBrowse link ISS 5 30,541,610 30,576,168 RGD:1600115 UniProtKB
G Rnf168 ring finger protein 168, E3 ubiquitin protein ligase GBrowse link ISS 11 70,304,917 70,328,010 RGD:1600115 UniProtKB
G Rnf168 ring finger protein 168, E3 ubiquitin protein ligase GBrowse link ISO 11 70,304,917 70,328,010 RGD:1624291 RGD
G Rnf8 ring finger protein 8, E3 ubiquitin protein ligase GBrowse link ISO 20 7,929,802 7,954,697 RGD:1624291 RGD
G Rnf8 ring finger protein 8, E3 ubiquitin protein ligase GBrowse link ISS 20 7,929,802 7,954,697 RGD:1600115 UniProtKB
G Swap70 SWAP switching B-cell complex 70 GBrowse link ISO 1 167,888,783 167,949,621 RGD:1624291 RGD
G Swap70 SWAP switching B-cell complex 70 GBrowse link IEA 1 167,888,783 167,949,621 RGD:1600115 ENSEMBL
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 GBrowse link ISO 2 19,904,490 20,158,358 RGD:1624291 RGD
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 GBrowse link IEA 2 19,904,490 20,158,358 RGD:1600115 ENSEMBL
isotype switching to IgG isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Hspd1 heat shock protein 1 (chaperonin) GBrowse link ISO 9 53,884,193 53,895,043 RGD:1624291 RGD
meiotic gene conversion term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Msh2 mutS homolog 2 (E. coli) GBrowse link IBA 6 11,199,906 11,258,350 RGD:1600115 RefGenome
G Prdm9 PR domain containing 9 GBrowse link ISO 1 54,444,598 54,452,679 RGD:1624291 RGD
G Prdm9 PR domain containing 9 GBrowse link IEA 1 54,444,598 54,452,679 RGD:1600115 ENSEMBL
mitotic recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 GBrowse link ISO 1 78,711,249 78,722,474 RGD:1624291 RGD
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 GBrowse link IEA 1 78,711,249 78,722,474 RGD:1600115 ENSEMBL
G Top2a topoisomerase (DNA) II alpha GBrowse link IBA 10 87,771,337 87,800,960 RGD:1600115 RefGenome
negative regulation of DNA recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Blm Bloom syndrome, RecQ helicase-like GBrowse link ISO 1 136,271,573 136,358,077 RGD:1624291 RGD
G Lig3 ligase III, DNA, ATP-dependent GBrowse link ISO 10 71,000,287 71,021,398 RGD:1624291 RGD
G Lig3 ligase III, DNA, ATP-dependent GBrowse link IEA 10 71,000,287 71,021,398 RGD:1600115 ENSEMBL
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link IEA 6 11,199,906 11,258,350 RGD:1600115 ENSEMBL
G Msh3 mutS homolog 3 (E. coli) GBrowse link ISO 2 22,462,934 22,606,874 RGD:1624291 RGD
G Msh3 mutS homolog 3 (E. coli) GBrowse link IEA 2 22,462,934 22,606,874 RGD:1600115 ENSEMBL
G Msh6 mutS homolog 6 (E. coli) GBrowse link ISO 6 11,525,292 11,542,592 RGD:1624291 RGD
G Msh6 mutS homolog 6 (E. coli) GBrowse link ISO 6 11,525,292 11,542,592 RGD:1624291 RGD
G Rad18 RAD18 homolog (S. cerevisiae) GBrowse link ISO 4 148,452,664 148,543,743 RGD:1624291 RGD
G Rad18 RAD18 homolog (S. cerevisiae) GBrowse link IEA 4 148,452,664 148,543,743 RGD:1600115 ENSEMBL
G Zranb3 zinc finger, RAN-binding domain containing 3 GBrowse link ISO 13 40,648,221 40,803,738 RGD:1624291 RGD
negative regulation of DNA recombination at telomere term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Pot1b protection of telomeres 1B ISO RGD:1624291 RGD
G Terf2ip telomeric repeat binding factor 2, interacting protein GBrowse link ISO 19 41,946,621 41,954,910 RGD:1624291 RGD
G Terf2ip telomeric repeat binding factor 2, interacting protein GBrowse link ISO 19 41,946,621 41,954,910 RGD:1624291 RGD
G Terf2ip telomeric repeat binding factor 2, interacting protein GBrowse link ISS 19 41,946,621 41,954,910 RGD:1600115 UniProtKB
negative regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Parpbp PARP1 binding protein GBrowse link ISO 7 24,777,634 24,847,083 RGD:1624291 RGD
G Parpbp PARP1 binding protein GBrowse link ISS 7 24,777,634 24,847,083 RGD:1600115 UniProtKB
negative regulation of isotype switching to IgE isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bcl6 B-cell CLL/lymphoma 6 GBrowse link ISO 11 79,006,123 79,030,555 RGD:1624291 RGD
G Bcl6 B-cell CLL/lymphoma 6 GBrowse link IEA 11 79,006,123 79,030,555 RGD:1600115 ENSEMBL
G Foxp3 forkhead box P3 GBrowse link ISO X 26,950,006 26,965,329 RGD:1624291 RGD
G Foxp3 forkhead box P3 GBrowse link IBA X 26,950,006 26,965,329 RGD:1600115 RefGenome
G Ndfip1 Nedd4 family interacting protein 1 GBrowse link ISO 18 31,351,538 31,401,736 RGD:1624291 RGD
G Ndfip1 Nedd4 family interacting protein 1 GBrowse link IEA 18 31,351,538 31,401,736 RGD:1600115 ENSEMBL
negative regulation of mitotic recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Blm Bloom syndrome, RecQ helicase-like GBrowse link ISO 1 136,271,573 136,358,077 RGD:1624291 RGD
G Blm Bloom syndrome, RecQ helicase-like GBrowse link ISO 1 136,271,573 136,358,077 RGD:1624291 RGD
G Blm Bloom syndrome, RecQ helicase-like GBrowse link ISO 1 136,271,573 136,358,077 RGD:1624291 RGD
G Blm Bloom syndrome, RecQ helicase-like GBrowse link ISO 1 136,271,573 136,358,077 RGD:1624291 RGD
G Blm Bloom syndrome, RecQ helicase-like GBrowse link IEA 1 136,271,573 136,358,077 RGD:1600115 ENSEMBL
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link IEA 8 115,616,396 115,653,471 RGD:1600115 ENSEMBL
negative regulation of reciprocal meiotic recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Msh2 mutS homolog 2 (E. coli) GBrowse link IBA 6 11,199,906 11,258,350 RGD:1600115 RefGenome
positive regulation of isotype switching term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Exosc3 exosome component 3 GBrowse link ISO 5 61,880,622 61,883,825 RGD:1624291 RGD
G Exosc6 exosome component 6 GBrowse link ISO 19 40,975,037 40,976,299 RGD:1624291 RGD
G Paxip1 PAX interacting (with transcription-activation domain) protein 1 GBrowse link ISO 4 2,790,532 2,839,246 RGD:1624291 RGD
G Paxip1 PAX interacting (with transcription-activation domain) protein 1 GBrowse link IEA 4 2,790,532 2,839,246 RGD:1600115 ENSEMBL
positive regulation of isotype switching to IgA isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Tgfb1 transforming growth factor, beta 1 GBrowse link ISO 1 80,894,705 80,911,020 RGD:1624291 RGD
G Tgfb1 transforming growth factor, beta 1 GBrowse link IEA 1 80,894,705 80,911,020 RGD:1600115 ENSEMBL
G Tnfsf13 tumor necrosis factor (ligand) superfamily, member 13 GBrowse link ISO 10 56,499,945 56,502,928 RGD:1624291 RGD
G Tnfsf13 tumor necrosis factor (ligand) superfamily, member 13 GBrowse link ISO 10 56,499,945 56,502,928 RGD:1624291 RGD
positive regulation of isotype switching to IgE isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Clcf1 cardiotrophin-like cytokine factor 1 GBrowse link ISO 1 206,802,745 206,806,332 RGD:1624291 RGD
G Il4 interleukin 4 GBrowse link ISO 10 39,074,582 39,080,134 RGD:1624291 RGD
G Il4 interleukin 4 GBrowse link IEA 10 39,074,582 39,080,134 RGD:1600115 ENSEMBL
G Stat6 signal transducer and activator of transcription 6, interleukin-4 induced GBrowse link ISO 7 67,623,534 67,642,283 RGD:1624291 RGD
G Stat6 signal transducer and activator of transcription 6, interleukin-4 induced GBrowse link IEA 7 67,623,534 67,642,283 RGD:1600115 ENSEMBL
positive regulation of isotype switching to IgG isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Cd28 Cd28 molecule GBrowse link ISO 9 59,342,273 59,367,743 RGD:1624291 RGD
G Cd28 Cd28 molecule GBrowse link IEA 9 59,342,273 59,367,743 RGD:1600115 ENSEMBL
G Cd40 CD40 molecule, TNF receptor superfamily member 5 GBrowse link IDA 3 156,092,602 156,107,427 RGD:2290270 MGI
G Cd40 CD40 molecule, TNF receptor superfamily member 5 GBrowse link ISO 3 156,092,602 156,107,427 RGD:1624291 RGD
G Cd40 CD40 molecule, TNF receptor superfamily member 5 GBrowse link IEA 3 156,092,602 156,107,427 RGD:1600115 ENSEMBL
G Ifng interferon gamma GBrowse link ISO 7 57,621,756 57,625,792 RGD:1624291 RGD
G Ifng interferon gamma GBrowse link IEA 7 57,621,756 57,625,792 RGD:1600115 ENSEMBL
G Il2 interleukin 2 GBrowse link ISO 2 123,655,005 123,659,709 RGD:1624291 RGD
G Il2 interleukin 2 GBrowse link IEA 2 123,655,005 123,659,709 RGD:1600115 ENSEMBL
G Il4 interleukin 4 GBrowse link ISO 10 39,074,582 39,080,134 RGD:1624291 RGD
G Il4 interleukin 4 GBrowse link ISO 10 39,074,582 39,080,134 RGD:1624291 RGD
G Il4 interleukin 4 GBrowse link IEA 10 39,074,582 39,080,134 RGD:1600115 ENSEMBL
G Ptprc protein tyrosine phosphatase, receptor type, C GBrowse link ISO 13 51,246,163 51,357,995 RGD:1624291 RGD
G Ptprc protein tyrosine phosphatase, receptor type, C GBrowse link IEA 13 51,246,163 51,357,995 RGD:1600115 ENSEMBL
G Tbx21 T-box 21 GBrowse link ISO 10 85,817,743 85,834,178 RGD:1624291 RGD
G Tbx21 T-box 21 GBrowse link IEA 10 85,817,743 85,834,178 RGD:1600115 ENSEMBL
positive regulation of reciprocal meiotic recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Prdm9 PR domain containing 9 GBrowse link ISO 1 54,444,598 54,452,679 RGD:1624291 RGD
G Prdm9 PR domain containing 9 GBrowse link ISO 1 54,444,598 54,452,679 RGD:1624291 RGD
G Prdm9 PR domain containing 9 GBrowse link ISO 1 54,444,598 54,452,679 RGD:1624291 RGD
G Prdm9 PR domain containing 9 GBrowse link IEA 1 54,444,598 54,452,679 RGD:1600115 ENSEMBL
G Ube2b ubiquitin-conjugating enzyme E2B GBrowse link ISO 10 37,509,322 37,523,900 RGD:1624291 RGD
G Ube2b ubiquitin-conjugating enzyme E2B GBrowse link IEA 10 37,509,322 37,523,900 RGD:1600115 ENSEMBL
reciprocal meiotic recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Dmc1 DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast) GBrowse link IEA 7 117,476,702 117,520,670 RGD:1600115 InterPro
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link IBA 8 115,616,396 115,653,471 RGD:1600115 RefGenome
G Mlh3 mutL homolog 3 (E. coli) GBrowse link IBA 6 109,280,910 109,318,893 RGD:1600115 RefGenome
G Mre11a MRE11 meiotic recombination 11 homolog A (S. cerevisiae) GBrowse link TAS 8 11,588,409 11,632,483 RGD:68816 RGD
G Msh3 mutS homolog 3 (E. coli) GBrowse link IBA 2 22,462,934 22,606,874 RGD:1600115 RefGenome
G Msh4 mutS homolog 4 (E. coli) GBrowse link IBA 2 251,801,090 251,851,133 RGD:1600115 RefGenome
G Msh5 mutS homolog 5 (E. coli) GBrowse link IBA 20 3,845,731 3,862,011 RGD:1600115 RefGenome
G Nbn nibrin GBrowse link TAS 5 30,541,610 30,576,168 RGD:68816 RGD
G Pms1 postmeiotic segregation increased 1 (S. cerevisiae) GBrowse link IBA 9 45,203,344 45,292,624 RGD:1600115 RefGenome
G Pms2 postmeiotic segregation increased 2 (S. cerevisiae) GBrowse link IBA 12 11,004,507 11,028,754 RGD:1600115 RefGenome
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link TAS 10 39,112,733 39,164,694 RGD:68816 RGD
G Rad51c Rad51 homolog c (S. cerevisiae) GBrowse link ISO 10 75,692,205 75,718,369 RGD:1624291 RGD
G Rad51c Rad51 homolog c (S. cerevisiae) GBrowse link IEA 10 75,692,205 75,718,369 RGD:1600115 ENSEMBL
G RGD1563556 similar to mKIAA1377 protein GBrowse link IBA 8 4,901,073 4,949,640 RGD:1600115 RefGenome
G Spo11 SPO11 meiotic protein covalently bound to DSB homolog (S. cerevisiae) GBrowse link ISO 3 163,842,817 163,854,067 RGD:1624291 RGD
G Stra8 stimulated by retinoic acid 8 GBrowse link ISO 4 62,321,565 62,336,954 RGD:1624291 RGD
G Stra8 stimulated by retinoic acid 8 GBrowse link IEA 4 62,321,565 62,336,954 RGD:1600115 ENSEMBL
G Syce3 synaptonemal complex central element protein 3 GBrowse link ISO 7 127,684,549 127,710,970 RGD:1624291 RGD
G Syce3 synaptonemal complex central element protein 3 GBrowse link IEA 7 127,684,549 127,710,970 RGD:1600115 ENSEMBL
G Trip13 thyroid hormone receptor interactor 13 GBrowse link ISO 1 30,165,330 30,210,271 RGD:1624291 RGD
G Trip13 thyroid hormone receptor interactor 13 GBrowse link ISO 1 30,165,330 30,210,271 RGD:1624291 RGD
G Trip13 thyroid hormone receptor interactor 13 GBrowse link ISS 1 30,165,330 30,210,271 RGD:1600115 UniProtKB
recombinational repair term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G MGC94282 similar to 5930416I19Rik protein GBrowse link IEA 4 165,378,057 165,383,443 RGD:1600115 ENSEMBL
regulation of DNA recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` GBrowse link IEA 4 94,550,328 94,610,832 RGD:1600115 ENSEMBL
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1` GBrowse link ISO 4 94,550,328 94,610,832 RGD:1624291 RGD
regulation of double-strand break repair via homologous recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Chek1 checkpoint kinase 1 GBrowse link ISO 8 37,954,322 37,974,748 RGD:1624291 RGD
G Chek1 checkpoint kinase 1 GBrowse link ISS 8 37,954,322 37,974,748 RGD:1600115 UniProtKB
G Ppp4c protein phosphatase 4, catalytic subunit GBrowse link ISO 1 185,961,286 185,967,851 RGD:1624291 RGD
G Ppp4c protein phosphatase 4, catalytic subunit GBrowse link IEA 1 185,961,286 185,967,851 RGD:1600115 ENSEMBL
G Ppp4c protein phosphatase 4, catalytic subunit GBrowse link ISS 1 185,961,286 185,967,851 RGD:1600115 UniProtKB
G Ppp4r2 protein phosphatase 4, regulatory subunit 2 GBrowse link ISO 4 135,720,581 135,761,507 RGD:1624291 RGD
G Rpa2 replication protein A2 GBrowse link ISO 5 152,369,550 152,380,370 RGD:1624291 RGD
G Rpa2 replication protein A2 GBrowse link ISS 5 152,369,550 152,380,370 RGD:1600115 UniProtKB
G Rtel1 regulator of telomere elongation helicase 1 GBrowse link ISO 3 170,461,613 170,496,959 RGD:1624291 RGD
G Rtel1 regulator of telomere elongation helicase 1 GBrowse link ISS 3 170,461,613 170,496,959 RGD:1600115 UniProtKB
G Sirt6 sirtuin 6 GBrowse link ISO 7 9,555,269 9,560,695 RGD:1624291 RGD
G Sirt6 sirtuin 6 GBrowse link IEA 7 9,555,269 9,560,695 RGD:1600115 ENSEMBL
G Terf2ip telomeric repeat binding factor 2, interacting protein GBrowse link ISO 19 41,946,621 41,954,910 RGD:1624291 RGD
G Terf2ip telomeric repeat binding factor 2, interacting protein GBrowse link ISS 19 41,946,621 41,954,910 RGD:1600115 UniProtKB
G Tex15 testis expressed 15 GBrowse link ISO 16 62,371,381 62,385,448 RGD:1624291 RGD
G Tex15 testis expressed 15 GBrowse link IEA 16 62,371,381 62,385,448 RGD:1600115 ENSEMBL
regulation of isotype switching to IgG isotypes term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Foxp3 forkhead box P3 GBrowse link ISO X 26,950,006 26,965,329 RGD:1624291 RGD
G Foxp3 forkhead box P3 GBrowse link IBA X 26,950,006 26,965,329 RGD:1600115 RefGenome
G Il27ra interleukin 27 receptor, alpha GBrowse link ISO 19 25,795,355 25,807,317 RGD:1624291 RGD
G Il27ra interleukin 27 receptor, alpha GBrowse link IEA 19 25,795,355 25,807,317 RGD:1600115 ENSEMBL
G Ndfip1 Nedd4 family interacting protein 1 GBrowse link ISO 18 31,351,538 31,401,736 RGD:1624291 RGD
G Ndfip1 Nedd4 family interacting protein 1 GBrowse link IEA 18 31,351,538 31,401,736 RGD:1600115 ENSEMBL
regulation of mitotic recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link ISO 10 39,112,733 39,164,694 RGD:1624291 RGD
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link IEA 10 39,112,733 39,164,694 RGD:1600115 ENSEMBL
G Rad50 RAD50 homolog (S. cerevisiae) GBrowse link ISS 10 39,112,733 39,164,694 RGD:1600115 UniProtKB
resolution of meiotic recombination intermediates term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Ercc4 excision repair cross-complementing rodent repair deficiency, complementation group 4 GBrowse link IBA 10 2,144,262 2,177,554 RGD:1600115 RefGenome
G LOC688631 similar to DNA repair endonuclease XPF (DNA excision repair protein ERCC-4) GBrowse link IBA 10 890,868 1,227,048 RGD:1600115 RefGenome
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link IEA 8 115,616,396 115,653,471 RGD:1600115 ENSEMBL
G Tex11 testis expressed 11 GBrowse link ISO X 88,852,071 89,124,940 RGD:1624291 RGD
G Top2a topoisomerase (DNA) II alpha GBrowse link IBA 10 87,771,337 87,800,960 RGD:1600115 RefGenome
somatic cell DNA recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Swap70 SWAP switching B-cell complex 70 GBrowse link ISO 1 167,888,783 167,949,621 RGD:1624291 RGD
somatic recombination of immunoglobulin gene segments term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
G Msh3 mutS homolog 3 (E. coli) GBrowse link ISO 2 22,462,934 22,606,874 RGD:1624291 RGD
G Msh3 mutS homolog 3 (E. coli) GBrowse link IBA 2 22,462,934 22,606,874 RGD:1600115 RefGenome
G Msh6 mutS homolog 6 (E. coli) GBrowse link ISO 6 11,525,292 11,542,592 RGD:1624291 RGD
G Pms2 postmeiotic segregation increased 2 (S. cerevisiae) GBrowse link IEA 12 11,004,507 11,028,754 RGD:1600115 ENSEMBL
G Pms2 postmeiotic segregation increased 2 (S. cerevisiae) GBrowse link ISO 12 11,004,507 11,028,754 RGD:1624291 RGD
G Ung uracil-DNA glycosylase GBrowse link ISO 12 43,520,629 43,528,873 RGD:1624291 RGD
somatic recombination of immunoglobulin genes involved in immune response term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Mlh1 mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) GBrowse link ISO 8 115,616,396 115,653,471 RGD:1624291 RGD
G Msh2 mutS homolog 2 (E. coli) GBrowse link ISO 6 11,199,906 11,258,350 RGD:1624291 RGD
T cell receptor V(D)J recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bcl11b B-cell CLL/lymphoma 11B (zinc finger protein) GBrowse link ISO 6 132,292,671 132,384,572 RGD:1624291 RGD
G Bcl11b B-cell CLL/lymphoma 11B (zinc finger protein) GBrowse link IEA 6 132,292,671 132,384,572 RGD:1600115 ENSEMBL
G Lef1 lymphoid enhancer binding factor 1 GBrowse link ISO 2 228,550,263 228,673,131 RGD:1624291 RGD
G Lef1 lymphoid enhancer binding factor 1 GBrowse link IEA 2 228,550,263 228,673,131 RGD:1600115 ENSEMBL
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link IEA 16 84,881,880 84,888,448 RGD:1600115 ENSEMBL
G Prkdc protein kinase, DNA activated, catalytic polypeptide GBrowse link ISO 11 86,951,420 87,169,229 RGD:1624291 RGD
G Tcf7 transcription factor 7 (T-cell specific, HMG-box) GBrowse link ISO 10 37,686,862 37,716,831 RGD:1624291 RGD
G Tcf7 transcription factor 7 (T-cell specific, HMG-box) GBrowse link IEA 10 37,686,862 37,716,831 RGD:1600115 ENSEMBL
telomere maintenance via recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Nsmce2 non-SMC element 2, MMS21 homolog (S. cerevisiae) GBrowse link ISO 7 96,167,635 96,393,594 RGD:1624291 RGD
G Nsmce2 non-SMC element 2, MMS21 homolog (S. cerevisiae) GBrowse link ISS 7 96,167,635 96,393,594 RGD:1600115 UniProtKB
G Smc5 structural maintenance of chromosomes 5 GBrowse link IEA 1 226,494,137 226,566,143 RGD:1600115 ENSEMBL
G Smc5 structural maintenance of chromosomes 5 GBrowse link ISO 1 226,494,137 226,566,143 RGD:1624291 RGD
G Smc6 structural maintenance of chromosomes 6 GBrowse link IEA 6 34,710,177 34,763,158 RGD:1600115 ENSEMBL
G Smc6 structural maintenance of chromosomes 6 GBrowse link ISO 6 34,710,177 34,763,158 RGD:1624291 RGD
G Tep1 telomerase associated protein 1 GBrowse link ISO 15 26,802,624 26,852,308 RGD:1624291 RGD
V(D)J recombination term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Hmgb1 high mobility group box 1 ISO RGD:1624291 RGD
G Lig1 ligase I, DNA, ATP-dependent GBrowse link NOT ISO 1 73,728,892 73,767,429 RGD:1624291 RGD
G Lig3 ligase III, DNA, ATP-dependent GBrowse link NOT ISO 10 71,000,287 71,021,398 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link ISO 16 84,881,880 84,888,448 RGD:1624291 RGD
G Lig4 ligase IV, DNA, ATP-dependent GBrowse link IBA 16 84,881,880 84,888,448 RGD:1600115 RefGenome
G Rag1 recombination activating gene 1 GBrowse link IGI 3 86,780,782 86,791,878 RGD:2290270 MGI
G Rag1 recombination activating gene 1 GBrowse link ISO 3 86,780,782 86,791,878 RGD:1624291 RGD
G Rag1 recombination activating gene 1 GBrowse link IMP 3 86,780,782 86,791,878 RGD:2290270 UniProtKB
G Rag1 recombination activating gene 1 GBrowse link ISO 3 86,780,782 86,791,878 RGD:1624291 RGD
G Rag1 recombination activating gene 1 GBrowse link IMP 3 86,780,782 86,791,878 RGD:2290270 UniProtKB
G Rag1 recombination activating gene 1 GBrowse link ISO 3 86,780,782 86,791,878 RGD:1624291 RGD
G Rag1 recombination activating gene 1 GBrowse link IMP 3 86,780,782 86,791,878 RGD:2290270 UniProtKB
G Rag1 recombination activating gene 1 GBrowse link ISO 3 86,780,782 86,791,878 RGD:1624291 RGD
G Rag1 recombination activating gene 1 GBrowse link IMP 3 86,780,782 86,791,878 RGD:2290270 UniProtKB
G Rag1 recombination activating gene 1 GBrowse link ISO 3 86,780,782 86,791,878 RGD:1624291 RGD
G Rag1 recombination activating gene 1 GBrowse link IEA 3 86,780,782 86,791,878 RGD:1600115 ENSEMBL
G Rag1 recombination activating gene 1 GBrowse link ISO 3 86,780,782 86,791,878 RGD:2290270 RGD
G Rag2 recombination activating gene 2 GBrowse link ISO 3 86,764,810 86,773,438 RGD:1624291 RGD
G Rag2 recombination activating gene 2 GBrowse link ISO 3 86,764,810 86,773,438 RGD:1624291 RGD
G Rag2 recombination activating gene 2 GBrowse link ISO 3 86,764,810 86,773,438 RGD:1624291 RGD
G Rag2 recombination activating gene 2 GBrowse link IEA 3 86,764,810 86,773,438 RGD:1600115 ENSEMBL
G Xrcc4 X-ray repair complementing defective repair in Chinese hamster cells 4 GBrowse link ISO 2 19,904,490 20,158,358 RGD:1624291 RGD
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 GBrowse link ISO 7 120,401,944 120,422,923 RGD:1624291 RGD
G Xrcc6 X-ray repair complementing defective repair in Chinese hamster cells 6 GBrowse link IEA 7 120,401,944 120,422,923 RGD:1600115 ENSEMBL
Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 135967
    cellular process 85138
      cellular metabolic process 30423
        cellular macromolecule metabolic process 21835
          DNA metabolic process 2273
            DNA recombination 365
              DNA ligation involved in DNA recombination 2
              RNA-mediated DNA recombination 0
              gene conversion + 3
              intrachromosomal DNA recombination 0
              intron homing + 0
              meiotic heteroduplex formation 0
              mitotic recombination + 20
              negative regulation of DNA recombination + 34
              plasmid recombination 0
              positive regulation of DNA recombination + 35
              reciprocal DNA recombination + 39
              recombination within rDNA repeats + 0
              recombinational repair + 98
              regulation of DNA recombination + 96
              resolution of recombination intermediates + 0
              somatic cell DNA recombination + 135
              strand displacement + 0
              strand invasion + 0
              transposition, DNA-mediated + 0
Path 2
Term Annotations click to browse term
  biological_process 135967
    metabolic process 36390
      cellular metabolic process 30423
        cellular nitrogen compound metabolic process 15301
          nucleobase-containing compound metabolic process 14436
            nucleic acid metabolic process 12471
              DNA metabolic process 2273
                DNA recombination 365
                  DNA ligation involved in DNA recombination 2
                  RNA-mediated DNA recombination 0
                  gene conversion + 3
                  intrachromosomal DNA recombination 0
                  intron homing + 0
                  meiotic heteroduplex formation 0
                  mitotic recombination + 20
                  negative regulation of DNA recombination + 34
                  plasmid recombination 0
                  positive regulation of DNA recombination + 35
                  reciprocal DNA recombination + 39
                  recombination within rDNA repeats + 0
                  recombinational repair + 98
                  regulation of DNA recombination + 96
                  resolution of recombination intermediates + 0
                  somatic cell DNA recombination + 135
                  strand displacement + 0
                  strand invasion + 0
                  transposition, DNA-mediated + 0
paths to the root

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