branching involved in ureteric bud morphogenesis - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	branching involved in ureteric bud morphogenesis	go back to main search page
Accession:	GO:0001658	browse the term
Definition:	The process in which the branching structure of the ureteric bud is generated and organized. The ureteric bud is an epithelial tube that grows out from the metanephric duct. The bud elongates and branches to give rise to the ureter and kidney collecting tubules.
Synonyms:	exact_synonym:	ureteric bud branching

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branching involved in ureteric bud morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Agt	angiotensinogen (serpin peptidase inhibitor, clade A, member 8)		NOT	ISO	19	54,738,556	54,750,349	RGD:1624291	RGD
G	Agt	angiotensinogen (serpin peptidase inhibitor, clade A, member 8)			ISO	19	54,738,556	54,750,349	RGD:1624291	RGD
G	Agt	angiotensinogen (serpin peptidase inhibitor, clade A, member 8)			IEA	19	54,738,556	54,750,349	RGD:1600115	ENSEMBL
G	Bcl2	B-cell CLL/lymphoma 2			ISO	13	12,730,736	12,905,108	RGD:1624291	RGD
G	Bcl2	B-cell CLL/lymphoma 2			ISO	13	12,730,736	12,905,108	RGD:1624291	RGD
G	Bcl2	B-cell CLL/lymphoma 2			IEA	13	12,730,736	12,905,108	RGD:1600115	ENSEMBL
G	Bmp2	bone morphogenetic protein 2			ISO	3	121,372,692	121,381,236	RGD:1624291	RGD
G	Bmp2	bone morphogenetic protein 2			IEA	3	121,372,692	121,381,236	RGD:1600115	ENSEMBL
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISS	15	22,283,171	22,286,757	RGD:1600115	UniProtKB
G	Bmp4	bone morphogenetic protein 4			IEA	15	22,283,171	22,286,757	RGD:1600115	ENSEMBL
G	Cd44	Cd44 molecule			ISO	3	88,022,962	88,110,352	RGD:1624291	RGD
G	Cd44	Cd44 molecule			IEA	3	88,022,962	88,110,352	RGD:1600115	ENSEMBL
G	Cited1	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1		NOT	ISO	X	90,301,067	90,305,762	RGD:1624291	RGD
G	Cited1	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1			IMP	X	90,301,067	90,305,762		UniProtKB
G	Cited2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2		NOT	ISO	1	12,721,500	12,723,943	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1			ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1			IBA	8	125,978,161	125,987,670	RGD:1600115	RefGenome
G	Ctnnbip1	catenin, beta-interacting protein 1			ISO	5	166,601,155	166,650,163	RGD:1624291	RGD
G	Ctnnbip1	catenin, beta-interacting protein 1			IBA	5	166,601,155	166,650,163	RGD:1600115	RefGenome
G	Dlg1	discs, large homolog 1 (Drosophila)			ISO	11	70,735,283	70,930,374	RGD:1624291	RGD
G	Dlg1	discs, large homolog 1 (Drosophila)			ISO	11	70,735,283	70,930,374	RGD:1624291	RGD
G	Dlg1	discs, large homolog 1 (Drosophila)			ISO	11	70,735,283	70,930,374	RGD:1624291	RGD
G	Dlg1	discs, large homolog 1 (Drosophila)			IEA	11	70,735,283	70,930,374	RGD:1600115	ENSEMBL
G	Eya1	eyes absent homolog 1 (Drosophila)			ISO	5	4,132,825	4,276,837	RGD:1624291	RGD
G	Fgf2	fibroblast growth factor 2			ISO	2	123,893,314	123,947,136	RGD:1624291	RGD
G	Fgf2	fibroblast growth factor 2			ISS	2	123,893,314	123,947,136	RGD:1600115	UniProtKB
G	Fgf8	fibroblast growth factor 8			ISO	1	250,951,023	250,956,730	RGD:1624291	RGD
G	Fgf8	fibroblast growth factor 8			IEA	1	250,951,023	250,956,730	RGD:1600115	ENSEMBL
G	Foxd1	forkhead box D1			ISO	2	28,944,067	28,945,665	RGD:1624291	RGD
G	Foxd3	forkhead box D3			IBA	5	120,334,468	120,335,794	RGD:1600115	RefGenome
G	Gdnf	glial cell derived neurotrophic factor			ISO	2	57,399,312	57,424,030	RGD:1624291	RGD
G	Gdnf	glial cell derived neurotrophic factor			ISO	2	57,399,312	57,424,030	RGD:1624291	RGD
G	Gdnf	glial cell derived neurotrophic factor			ISO	2	57,399,312	57,424,030	RGD:1624291	RGD
G	Gdnf	glial cell derived neurotrophic factor			IEA	2	57,399,312	57,424,030	RGD:1600115	ENSEMBL
G	Gli3	GLI family zinc finger 3			IGI	17	57,594,102	57,867,710	RGD:2290270	MGI
G	Gli3	GLI family zinc finger 3			ISO	17	57,594,102	57,867,710	RGD:1624291	RGD
G	Gpc3	glypican 3			ISO	X	139,192,115	139,560,649	RGD:1624291	RGD
G	Grem1	gremlin 1			ISO	3	99,597,201	99,608,935	RGD:1624291	RGD
G	Grem1	gremlin 1			IEA	3	99,597,201	99,608,935	RGD:1600115	ENSEMBL
G	Gzf1	GDNF-inducible zinc finger protein 1			ISO	3	137,415,095	137,427,203	RGD:1624291	RGD
G	Gzf1	GDNF-inducible zinc finger protein 1			IEA	3	137,415,095	137,427,203	RGD:1600115	ENSEMBL
G	Hoxa11	homeobox A11			ISO	4	80,542,417	80,546,079	RGD:1624291	RGD
G	Ilk	integrin-linked kinase			ISO	1	163,481,299	163,487,550	RGD:1624291	RGD
G	Ilk	integrin-linked kinase			IEA	1	163,481,299	163,487,550	RGD:1600115	ENSEMBL
G	Lama5	laminin, alpha 5			ISO	3	169,233,897	169,282,410	RGD:1624291	RGD
G	Lhx1	LIM homeobox 1			IEA	10	72,800,497	72,805,799	RGD:1600115	ENSEMBL
G	Myc	myelocytomatosis oncogene			ISO	7	98,953,142	98,958,060	RGD:1624291	RGD
G	Myc	myelocytomatosis oncogene			IEA	7	98,953,142	98,958,060	RGD:1600115	ENSEMBL
G	Myc	myelocytomatosis oncogene			ISS	7	98,953,142	98,958,060	RGD:1600115	UniProtKB
G	Pax2	paired box 2			ISO	1	249,804,055	249,895,306	RGD:1624291	RGD
G	Pax2	paired box 2			ISO	1	249,804,055	249,895,306	RGD:1624291	RGD
G	Pax2	paired box 2			ISS	1	249,804,055	249,895,306	RGD:1600115	UniProtKB
G	Pax8	paired box 8			ISO	3	2,671,478	2,726,801	RGD:1624291	RGD
G	Pbx1	pre-B-cell leukemia homeobox 1			ISO	13	83,839,256	84,115,516	RGD:1624291	RGD
G	Pbx1	pre-B-cell leukemia homeobox 1			IEA	13	83,839,256	84,115,516	RGD:1600115	ENSEMBL
G	Pgf	placental growth factor			ISO	6	109,215,540	109,226,122	RGD:1624291	RGD
G	Pgf	placental growth factor			IEA	6	109,215,540	109,226,122	RGD:1600115	ENSEMBL
G	Pkd2	polycystic kidney disease 2 (autosomal dominant)			ISO	14	6,349,519	6,392,988	RGD:1624291	RGD
G	Pkd2	polycystic kidney disease 2 (autosomal dominant)			IEA	14	6,349,519	6,392,988	RGD:1600115	ENSEMBL
G	Pspn	persephin			ISO				RGD:1624291	RGD
G	Pspn	persephin			IEA				RGD:1600115	ENSEMBL
G	Ptch1	patched 1			ISO	17	7,088,234	7,142,459	RGD:1624291	RGD
G	Ptch1	patched 1			IEA	17	7,088,234	7,142,459	RGD:1600115	ENSEMBL
G	Sall1	sal-like 1 (Drosophila)			ISO	19	19,277,337	19,293,298	RGD:1624291	RGD
G	Shh	sonic hedgehog			ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Shh	sonic hedgehog			IEA	4	2,200,504	2,209,657	RGD:1600115	ENSEMBL
G	Shh	sonic hedgehog			ISS	4	2,200,504	2,209,657	RGD:1600115	UniProtKB
G	Six1	SIX homeobox 1			ISO	6	95,470,153	95,475,389	RGD:1624291	RGD
G	Six1	SIX homeobox 1			IEA	6	95,470,153	95,475,389	RGD:1600115	ENSEMBL
G	Smad4	SMAD family member 4			ISO	18	70,432,705	70,461,541	RGD:1624291	RGD
G	Sox9	SRY (sex determining region Y)-box 9			IEA	10	102,392,187	102,394,256	RGD:1600115	ENSEMBL
G	Tcf21	transcription factor 21			ISO	1	23,211,054	23,213,913	RGD:1624291	RGD
G	Tcf21	transcription factor 21			ISO	1	23,211,054	23,213,913	RGD:1624291	RGD
G	Tcf21	transcription factor 21			ISS	1	23,211,054	23,213,913	RGD:1600115	UniProtKB
G	Timeless	timeless circadian clock			IMP	7	1,516,568	1,540,512	RGD:2308864	RGD
G	Wnt1	wingless-type MMTV integration site family, member 1			IEA	7	137,557,836	137,561,883	RGD:1600115	ENSEMBL
G	Wnt1	wingless-type MMTV integration site family, member 1			ISO	7	137,557,836	137,561,883	RGD:1624291	RGD
G	Wnt4	wingless-type MMTV integration site family, member 4			ISO	5	156,064,371	156,083,198	RGD:1624291	RGD
G	Wnt4	wingless-type MMTV integration site family, member 4			IEA	5	156,064,371	156,083,198	RGD:1600115	ENSEMBL
G	Wnt6	wingless-type MMTV integration site family, member 6			ISO	9	74,104,364	74,117,995	RGD:1624291	RGD
G	Wnt6	wingless-type MMTV integration site family, member 6			IEA	9	74,104,364	74,117,995	RGD:1600115	ENSEMBL
G	Wnt9b	wingless-type MMTV integration site family, member 9B			IEA	10	92,880,020	92,901,641	RGD:1600115	ENSEMBL
G	Wnt9b	wingless-type MMTV integration site family, member 9B			ISO	10	92,880,020	92,901,641	RGD:1624291	RGD
G	Wt1	Wilms tumor 1			ISO	3	90,529,704	90,577,280	RGD:1624291	RGD
G	Wt1	Wilms tumor 1			ISO	3	90,529,704	90,577,280	RGD:1624291	RGD
G	Wt1	Wilms tumor 1			ISS	3	90,529,704	90,577,280	RGD:1600115	UniProtKB
G	Wt1	Wilms tumor 1			ISS	3	90,529,704	90,577,280	RGD:1600115	UniProtKB
branch elongation involved in ureteric bud branching
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Fgf1	fibroblast growth factor 1 (acidic)			ISO	18	31,785,480	31,806,452	RGD:1624291	RGD
G	Fgf1	fibroblast growth factor 1 (acidic)			ISS	18	31,785,480	31,806,452	RGD:1600115	UniProtKB
dichotomous subdivision of terminal units involved in ureteric bud branching
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Foxd1	forkhead box D1			ISO	2	28,944,067	28,945,665	RGD:1624291	RGD
G	Foxd1	forkhead box D1			ISS	2	28,944,067	28,945,665	RGD:1600115	UniProtKB
G	Foxd1	forkhead box D1			IBA	2	28,944,067	28,945,665	RGD:1600115	RefGenome
G	Foxd2	forkhead box D2			IBA	5	135,269,120	135,270,809	RGD:1600115	RefGenome
G	Foxd4	forkhead box D4			IBA	1	228,348,202	228,349,654	RGD:1600115	RefGenome
negative regulation of branch elongation involved in ureteric bud branching by BMP signaling pathway
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISS	15	22,283,171	22,286,757	RGD:1600115	UniProtKB
G	Bmp4	bone morphogenetic protein 4			IEA	15	22,283,171	22,286,757	RGD:1600115	ENSEMBL
negative regulation of branching involved in ureteric bud morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISO	15	22,283,171	22,286,757	RGD:1624291	RGD
G	Bmp4	bone morphogenetic protein 4			ISS	15	22,283,171	22,286,757	RGD:1600115	UniProtKB
G	Bmp4	bone morphogenetic protein 4			IEA	15	22,283,171	22,286,757	RGD:1600115	ENSEMBL
G	Grem1	gremlin 1			ISO	3	99,597,201	99,608,935	RGD:1624291	RGD
G	Grem1	gremlin 1			IEA	3	99,597,201	99,608,935	RGD:1600115	ENSEMBL
G	Six1	SIX homeobox 1			ISO	6	95,470,153	95,475,389	RGD:1624291	RGD
G	Six1	SIX homeobox 1			IEA	6	95,470,153	95,475,389	RGD:1600115	ENSEMBL
G	Tacstd2	tumor-associated calcium signal transducer 2			ISO	4	97,803,151	97,804,851	RGD:1624291	RGD
G	Tacstd2	tumor-associated calcium signal transducer 2			ISS	4	97,803,151	97,804,851	RGD:1600115	UniProtKB
positive regulation of branching involved in ureteric bud morphogenesis
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Agt	angiotensinogen (serpin peptidase inhibitor, clade A, member 8)			ISO	19	54,738,556	54,750,349	RGD:1624291	RGD
G	Agt	angiotensinogen (serpin peptidase inhibitor, clade A, member 8)			IEA	19	54,738,556	54,750,349	RGD:1600115	ENSEMBL
G	Agtr1a	angiotensin II receptor, type 1a			IMP	17	40,629,318	40,684,982	RGD:1643596	UniProtKB
G	Agtr1b	angiotensin II receptor, type 1b			IMP	2	105,503,269	105,602,591	RGD:1643596	UniProtKB
G	Agtr1b	angiotensin II receptor, type 1b			ISO	2	105,503,269	105,602,591	RGD:2290270	RGD
G	Agtr2	angiotensin II receptor, type 2			ISO				RGD:1624291	RGD
G	Agtr2	angiotensin II receptor, type 2			IMP				RGD:1643596	UniProtKB
G	Bmp4	bone morphogenetic protein 4			IMP	15	22,283,171	22,286,757	RGD:1643596	UniProtKB
G	Gdnf	glial cell derived neurotrophic factor			ISO	2	57,399,312	57,424,030	RGD:1624291	RGD
G	Gdnf	glial cell derived neurotrophic factor			ISO	2	57,399,312	57,424,030	RGD:1624291	RGD
G	Gdnf	glial cell derived neurotrophic factor			ISO	2	57,399,312	57,424,030	RGD:1624291	RGD
G	Gdnf	glial cell derived neurotrophic factor			IEA	2	57,399,312	57,424,030	RGD:1600115	ENSEMBL
G	Grem1	gremlin 1			ISO	3	99,597,201	99,608,935	RGD:1624291	RGD
G	Grem1	gremlin 1			IEA	3	99,597,201	99,608,935	RGD:1600115	ENSEMBL
G	Hoxb7	homeo box B7			ISO	10	85,017,440	85,020,858	RGD:1624291	RGD
G	Hoxb7	homeo box B7			IEA	10	85,017,440	85,020,858	RGD:1600115	ENSEMBL
G	Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4			ISO	3	95,370,049	95,471,040	RGD:1624291	RGD
G	Lgr4	leucine-rich repeat-containing G protein-coupled receptor 4			IEA	3	95,370,049	95,471,040	RGD:1600115	ENSEMBL
G	Lhx1	LIM homeobox 1			ISO	10	72,800,497	72,805,799	RGD:1624291	RGD
G	Lhx1	LIM homeobox 1			ISS	10	72,800,497	72,805,799	RGD:1600115	UniProtKB
G	Maged1	melanoma antigen, family D, 1			ISO	X	82,054,042	82,060,563	RGD:1624291	RGD
G	Maged1	melanoma antigen, family D, 1			IEA	X	82,054,042	82,060,563	RGD:1600115	ENSEMBL
G	Nog	noggin			ISO	10	77,689,244	77,690,871	RGD:1624291	RGD
G	Nog	noggin			ISO	10	77,689,244	77,690,871	RGD:1624291	RGD
G	Nog	noggin			IEA	10	77,689,244	77,690,871	RGD:1600115	ENSEMBL
G	Nog	noggin			ISS	10	77,689,244	77,690,871	RGD:1600115	UniProtKB
G	Pax2	paired box 2			ISO	1	249,804,055	249,895,306	RGD:1624291	RGD
G	Pax2	paired box 2			ISO	1	249,804,055	249,895,306	RGD:1624291	RGD
G	Pax2	paired box 2			ISO	1	249,804,055	249,895,306	RGD:1624291	RGD
G	Pax2	paired box 2			ISS	1	249,804,055	249,895,306	RGD:1600115	UniProtKB
G	Pax8	paired box 8			ISO	3	2,671,478	2,726,801	RGD:1624291	RGD
G	Pax8	paired box 8			ISS	3	2,671,478	2,726,801	RGD:1600115	UniProtKB
G	Six1	SIX homeobox 1			ISO	6	95,470,153	95,475,389	RGD:1624291	RGD
G	Six1	SIX homeobox 1			IEA	6	95,470,153	95,475,389	RGD:1600115	ENSEMBL
G	Six4	SIX homeobox 4			IEA	6	95,526,293	95,539,953	RGD:1600115	ENSEMBL
G	Six4	SIX homeobox 4			ISO	6	95,526,293	95,539,953	RGD:1624291	RGD
G	Smo	smoothened, frizzled family receptor			ISO	4	56,623,494	56,645,571	RGD:1624291	RGD
G	Smo	smoothened, frizzled family receptor			IEA	4	56,623,494	56,645,571	RGD:1600115	ENSEMBL
G	Smo	smoothened, frizzled family receptor			ISS	4	56,623,494	56,645,571	RGD:1600115	UniProtKB
G	Sox8	SRY (sex determining region Y)-box 8			ISO	10	14,818,955	14,823,943	RGD:1624291	RGD
G	Sox8	SRY (sex determining region Y)-box 8			ISS	10	14,818,955	14,823,943	RGD:1600115	UniProtKB
G	Sox9	SRY (sex determining region Y)-box 9			IMP	10	102,392,187	102,394,256	RGD:2290270	UniProtKB
G	Sox9	SRY (sex determining region Y)-box 9			ISS	10	102,392,187	102,394,256	RGD:1600115	UniProtKB
G	Sox9	SRY (sex determining region Y)-box 9			ISO	10	102,392,187	102,394,256	RGD:1624291	RGD
G	Tgfb1	transforming growth factor, beta 1			IMP	1	80,894,705	80,911,020	RGD:1643596	UniProtKB
G	Vegfa	vascular endothelial growth factor A			ISO	9	10,520,730	10,536,071	RGD:1624291	RGD
G	Vegfa	vascular endothelial growth factor A			IEA	9	10,520,730	10,536,071	RGD:1600115	ENSEMBL
G	Wnt2b	wingless-type MMTV integration site family, member 2B			ISO	2	200,218,630	200,233,002	RGD:1624291	RGD
G	Wnt2b	wingless-type MMTV integration site family, member 2B			IEA	2	200,218,630	200,233,002	RGD:1600115	ENSEMBL
regulation of branch elongation involved in ureteric bud branching
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Hnf1b	HNF1 homeobox B			ISO	10	72,081,091	72,187,014	RGD:1624291	RGD
G	Six1	SIX homeobox 1			ISO	6	95,470,153	95,475,389	RGD:1624291	RGD
G	Six1	SIX homeobox 1			IEA	6	95,470,153	95,475,389	RGD:1600115	ENSEMBL
G	Six4	SIX homeobox 4			IEA	6	95,526,293	95,539,953	RGD:1600115	ENSEMBL
G	Six4	SIX homeobox 4			ISO	6	95,526,293	95,539,953	RGD:1624291	RGD

Term paths to the root

Path 1
Term	Annotations
biological_process	136531
developmental process	29548
anatomical structure morphogenesis	9373
morphogenesis of a branching structure	642
morphogenesis of a branching epithelium	611
branching morphogenesis of an epithelial tube	449
branching involved in ureteric bud morphogenesis	165
branch elongation involved in ureteric bud branching +	11
canonical Wnt receptor signaling pathway involved in ureteric bud branching	0
dichotomous subdivision of terminal units involved in ureteric bud branching	5
lateral sprouting involved in ureteric bud morphogenesis	0
negative regulation of branching involved in ureteric bud morphogenesis	11
positive regulation of branching involved in ureteric bud morphogenesis	49
regulation of branching involved in ureteric bud morphogenesis +	69
trifid subdivision of terminal units involved in ureteric bud branching	0
Path 2
Term	Annotations
biological_process	136531
single-organism process	88879
single-multicellular organism process	36188
multicellular organismal development	24679
system development	21210
urogenital system development	1436
renal system development	1207
ureteric bud development	273
ureteric bud morphogenesis	196
branching involved in ureteric bud morphogenesis	165
branch elongation involved in ureteric bud branching +	11
canonical Wnt receptor signaling pathway involved in ureteric bud branching	0
dichotomous subdivision of terminal units involved in ureteric bud branching	5
lateral sprouting involved in ureteric bud morphogenesis	0
negative regulation of branching involved in ureteric bud morphogenesis	11
positive regulation of branching involved in ureteric bud morphogenesis	49
regulation of branching involved in ureteric bud morphogenesis +	69
trifid subdivision of terminal units involved in ureteric bud branching	0