vasculogenesis - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:	vasculogenesis	go back to main search page
Accession:	GO:0001570	browse the term
Definition:	The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes.
Synonyms:	exact_synonym:	vascular morphogenesis
	xref_analog:	Wikipedia:Vasculogenesis

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vasculogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adm	adrenomedullin		ISO	1	168,380,255	168,382,426	RGD:1624291	RGD
G	Adm	adrenomedullin		IEA	1	168,380,255	168,382,426	RGD:1600115	ENSEMBL
G	Amot	angiomotin		ISO	X	33,018,434	33,062,515	RGD:1624291	RGD
G	Amot	angiomotin		IEA	X	33,018,434	33,062,515	RGD:1600115	ENSEMBL
G	Cav1	caveolin 1, caveolae protein		ISO	4	42,956,102	42,989,057	RGD:1624291	RGD
G	Cav1	caveolin 1, caveolae protein		IEA	4	42,956,102	42,989,057	RGD:1600115	ENSEMBL
G	Ccm2	cerebral cavernous malformation 2		ISO	14	87,307,223	87,353,553	RGD:1624291	RGD
G	Ccm2	cerebral cavernous malformation 2		IEA	14	87,307,223	87,353,553	RGD:1600115	ENSEMBL
G	Ccm2	cerebral cavernous malformation 2		IEA	14	87,307,223	87,353,553	RGD:1600115	ENSEMBL
G	Ccm2	cerebral cavernous malformation 2		ISO	14	87,307,223	87,353,553	RGD:1624291	RGD
G	Cited1	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1		ISO	X	90,301,067	90,305,762	RGD:1624291	RGD
G	Cited1	Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1		IEA	X	90,301,067	90,305,762	RGD:1600115	ENSEMBL
G	Cited2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2		ISO	1	12,721,500	12,723,943	RGD:1624291	RGD
G	Cited2	Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2		IEA	1	12,721,500	12,723,943	RGD:1600115	ENSEMBL
G	Ctnnb1	catenin (cadherin associated protein), beta 1		ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Cul7	cullin 7		ISO	9	10,020,543	10,034,167	RGD:1624291	RGD
G	Cul7	cullin 7		IEA	9	10,020,543	10,034,167	RGD:1600115	ENSEMBL
G	Cxcr7	chemokine (C-X-C motif) receptor 7		IEA	9	89,343,528	89,355,053	RGD:1600115	InterPro
G	Egfl7	EGF-like-domain, multiple 7		ISS	3	4,760,574	4,769,909	RGD:1600115	UniProtKB
G	Eng	endoglin		ISO				RGD:1624291	RGD
G	Eng	endoglin		ISO				RGD:1624291	RGD
G	Eng	endoglin		ISO				RGD:1624291	RGD
G	Epha2	Eph receptor A2		ISO	5	160,185,143	160,214,727	RGD:1624291	RGD
G	Fbxw7	F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase		ISO	2	176,675,226	176,750,737	RGD:1624291	RGD
G	Foxc2	forkhead box C2		IBA				RGD:1600115	RefGenome
G	Foxm1	forkhead box M1		ISO	4	165,383,666	165,394,688	RGD:1624291	RGD
G	Foxm1	forkhead box M1		IEA	4	165,383,666	165,394,688	RGD:1600115	ENSEMBL
G	Foxm1	forkhead box M1		IBA	4	165,383,666	165,394,688	RGD:1600115	RefGenome
G	Foxs1	forkhead box S1		IBA	3	143,272,507	143,273,776	RGD:1600115	RefGenome
G	Fzd4	frizzled family receptor 4		ISO	1	145,953,743	145,957,666	RGD:1624291	RGD
G	Fzd4	frizzled family receptor 4		IBA	1	145,953,743	145,957,666	RGD:1600115	RefGenome
G	Gdf2	growth differentiation factor 2		ISO				RGD:1624291	RGD
G	Gjc1	gap junction protein, gamma 1		ISO				RGD:1624291	RGD
G	Gjc1	gap junction protein, gamma 1		IEA				RGD:1600115	ENSEMBL
G	Glmn	glomulin, FKBP associated protein		IEA	14	2,744,359	2,789,190	RGD:1600115	ENSEMBL
G	Glmn	glomulin, FKBP associated protein		ISO	14	2,744,359	2,789,190	RGD:1624291	RGD
G	Hdac7	histone deacetylase 7		ISO	7	136,501,738	136,523,073	RGD:1624291	RGD
G	Heg1	heart development protein with EGF-like domains 1		ISO	11 11	68,828,748 68,828,748	68,889,177 68,912,073	RGD:1624291	RGD
G	Hey1	hairy/enhancer-of-split related with YRPW motif 1		ISO	2	95,174,030	95,176,430	RGD:1624291	RGD
G	Hey1	hairy/enhancer-of-split related with YRPW motif 1		IEA	2	95,174,030	95,176,430	RGD:1600115	ENSEMBL
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		ISO	1	27,505,117	27,515,204	RGD:1624291	RGD
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		IEA	1	27,505,117	27,515,204	RGD:1600115	ENSEMBL
G	Hhex	hematopoietically expressed homeobox		ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox		ISO	1	241,736,542	241,742,129	RGD:1624291	RGD
G	Hhex	hematopoietically expressed homeobox		IEA	1	241,736,542	241,742,129	RGD:1600115	ENSEMBL
G	Hoxa13	homeo box A13		ISO	4	80,558,841	80,561,053	RGD:1624291	RGD
G	Itgav	integrin, alpha V		IEP	3	66,953,403	67,029,774	RGD:1582460	RGD
G	Junb	jun B proto-oncogene		ISO	19	24,831,536	24,833,320	RGD:1624291	RGD
G	Junb	jun B proto-oncogene		IEA	19	24,831,536	24,833,320	RGD:1600115	ENSEMBL
G	Kdr	kinase insert domain receptor		ISO				RGD:1624291	RGD
G	Kdr	kinase insert domain receptor		ISS				RGD:1600115	UniProtKB
G	Kdr	kinase insert domain receptor		ISO				RGD:1624291	RGD
G	Myo18b	myosin XVIIIb		ISO				RGD:1624291	RGD
G	Myo1e	myosin IE		ISO	8	74,680,727	74,884,376	RGD:1624291	RGD
G	Myocd	myocardin		ISO	10	51,496,223	51,588,226	RGD:1624291	RGD
G	Myocd	myocardin		IEA	10	51,496,223	51,588,226	RGD:1600115	ENSEMBL
G	Nkx2-5	NK2 homeobox 5		ISO	10	16,606,183	16,608,952	RGD:1624291	RGD
G	Nkx2-5	NK2 homeobox 5		IEA	10	16,606,183	16,608,952	RGD:1600115	ENSEMBL
G	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2		ISO	17	11,494,463	11,811,654	RGD:1624291	RGD
G	Ntrk2	neurotrophic tyrosine kinase, receptor, type 2		IEA	17	11,494,463	11,811,654	RGD:1600115	ENSEMBL
G	Paxip1	PAX interacting (with transcription-activation domain) protein 1		ISO	4	2,790,532	2,839,246	RGD:1624291	RGD
G	Paxip1	PAX interacting (with transcription-activation domain) protein 1		IEA	4	2,790,532	2,839,246	RGD:1600115	ENSEMBL
G	Pitx2	paired-like homeodomain 2		ISO	2	226,581,170	226,601,319	RGD:1624291	RGD
G	Ptk2	protein tyrosine kinase 2		ISO	7	110,933,298	111,084,554	RGD:1624291	RGD
G	Ptk2	protein tyrosine kinase 2		IEA	7	110,933,298	111,084,554	RGD:1600115	ENSEMBL
G	Ptprj	protein tyrosine phosphatase, receptor type, J		ISO	3	74,796,764	74,935,540	RGD:1624291	RGD
G	Qk	quaking		ISO	1	44,922,562	45,025,572	RGD:1624291	RGD
G	Ramp2	receptor (G protein-coupled) activity modifying protein 2		ISO	10	90,275,463	90,277,242	RGD:1624291	RGD
G	Ramp2	receptor (G protein-coupled) activity modifying protein 2		ISS	10	90,275,463	90,277,242	RGD:1600115	UniProtKB
G	Rasa1	RAS p21 protein activator (GTPase activating protein) 1		ISS	2	14,203,815	14,287,824	RGD:1600115	UniProtKB
G	Rasip1	Ras interacting protein 1		IEA	1	96,097,668	96,108,543	RGD:1600115	ENSEMBL
G	Setd2	SET domain containing 2		ISO	8	114,913,851	114,999,955	RGD:1624291	RGD
G	Sgpl1	sphingosine-1-phosphate lyase 1		ISO	20	28,459,734	28,505,017	RGD:1624291	RGD
G	Sgpl1	sphingosine-1-phosphate lyase 1		IEA	20	28,459,734	28,505,017	RGD:1600115	ENSEMBL
G	Shh	sonic hedgehog		ISO	4	2,200,504	2,209,657	RGD:1624291	RGD
G	Shh	sonic hedgehog		IEA	4	2,200,504	2,209,657	RGD:1600115	ENSEMBL
G	Shh	sonic hedgehog		ISS	4	2,200,504	2,209,657	RGD:1600115	UniProtKB
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		ISO	8	20,720,915	20,812,157	RGD:1624291	RGD
G	Smarca4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4		IEA	8	20,720,915	20,812,157	RGD:1600115	ENSEMBL
G	Smo	smoothened, frizzled family receptor		ISO	4	56,623,494	56,645,571	RGD:1624291	RGD
G	Smo	smoothened, frizzled family receptor		ISO	4	56,623,494	56,645,571	RGD:1624291	RGD
G	Smo	smoothened, frizzled family receptor		IEA	4	56,623,494	56,645,571	RGD:1600115	ENSEMBL
G	Smo	smoothened, frizzled family receptor		IBA	4	56,623,494	56,645,571	RGD:1600115	RefGenome
G	Sox17	SRY (sex determining region Y)-box 17		ISO	5	15,241,405	15,246,904	RGD:1624291	RGD
G	Sox17	SRY (sex determining region Y)-box 17		IEA	5	15,241,405	15,246,904	RGD:1600115	ENSEMBL
G	Sox18	SRY (sex determining region Y)-box 18		ISO	3	170,820,460	170,822,262	RGD:1624291	RGD
G	Sox18	SRY (sex determining region Y)-box 18		IEA	3	170,820,460	170,822,262	RGD:1600115	ENSEMBL
G	T	brachyury		ISO	1	46,937,223	46,944,988	RGD:1624291	RGD
G	T	brachyury		IEA	1	46,937,223	46,944,988	RGD:1600115	ENSEMBL
G	Tdgf1	teratocarcinoma-derived growth factor 1		ISO	8	115,341,587	115,346,871	RGD:1624291	RGD
G	Tead2	TEA domain family member 2		ISO	1	95,694,077	95,709,961	RGD:1624291	RGD
G	Tead2	TEA domain family member 2		IEA	1	95,694,077	95,709,961	RGD:1600115	ENSEMBL
G	Tek	TEK tyrosine kinase, endothelial		TAS	5	115,047,195	115,196,172	RGD:724763	RGD
G	Tek	TEK tyrosine kinase, endothelial		ISO	5	115,047,195	115,196,172	RGD:1624291	RGD
G	Tgfbr2	transforming growth factor, beta receptor II		IEP	8	120,593,595	120,680,453	RGD:1601618	RGD
G	Tgfbr2	transforming growth factor, beta receptor II		ISO	8	120,593,595	120,680,453	RGD:1624291	RGD
G	Tie1	tyrosine kinase with immunoglobulin-like and EGF-like domains 1		IDA	5	138,945,238	138,964,631	RGD:724771	RGD
G	Tiparp	TCDD-inducible poly(ADP-ribose) polymerase		IEA	2	155,312,341	155,339,357	RGD:1600115	ENSEMBL
G	Tmem100	transmembrane protein 100		ISO	10	78,446,217	78,452,072	RGD:1624291	RGD
G	Tmem100	transmembrane protein 100		IEA	10	78,446,217	78,452,072	RGD:1600115	ENSEMBL
G	Tnni3	troponin I type 3 (cardiac)		ISO	1	68,028,198	68,031,882	RGD:1624291	RGD
G	Tnni3	troponin I type 3 (cardiac)		IEA	1	68,028,198	68,031,882	RGD:1600115	ENSEMBL
G	Wars2	tryptophanyl tRNA synthetase 2 (mitochondrial)		ISO	2	193,819,862	193,902,421	RGD:1624291	RGD
G	Wars2	tryptophanyl tRNA synthetase 2 (mitochondrial)		IEA	2	193,819,862	193,902,421	RGD:1600115	ENSEMBL
G	Wt1	Wilms tumor 1		ISO	3	90,529,704	90,577,280	RGD:1624291	RGD
G	Wt1	Wilms tumor 1		ISS	3	90,529,704	90,577,280	RGD:1600115	UniProtKB
G	Zfp36l1	zinc finger protein 36, C3H type-like 1		ISO	6	103,119,555	103,124,576	RGD:1624291	RGD
G	Zfp36l1	zinc finger protein 36, C3H type-like 1		IEA	6	103,119,555	103,124,576	RGD:1600115	ENSEMBL
G	Zfpm2	zinc finger protein, multitype 2		ISO	7	76,210,472	76,654,443	RGD:1624291	RGD
G	Zfpm2	zinc finger protein, multitype 2		ISO	7	76,210,472	76,654,443	RGD:1624291	RGD
G	Zfpm2	zinc finger protein, multitype 2		IEA	7	76,210,472	76,654,443	RGD:1600115	ENSEMBL
G	Zmiz1	zinc finger, MIZ-type containing 1		ISO	16	1,037,882	1,245,259	RGD:1624291	RGD
G	Zmiz1	zinc finger, MIZ-type containing 1		IEA	16	1,037,882	1,245,259	RGD:1600115	ENSEMBL
cell migration involved in vasculogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Pdgfrb	platelet derived growth factor receptor, beta polypeptide		ISO	18	57,014,475	57,053,581	RGD:1624291	RGD
G	Pdgfrb	platelet derived growth factor receptor, beta polypeptide		ISS	18	57,014,475	57,053,581	RGD:1600115	UniProtKB
G	Setd2	SET domain containing 2		ISO	8	114,913,851	114,999,955	RGD:1624291	RGD
central nervous system vasculogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ctnnb1	catenin (cadherin associated protein), beta 1		ISO	8	125,978,161	125,987,670	RGD:1624291	RGD
G	Ctnnb1	catenin (cadherin associated protein), beta 1		IBA	8	125,978,161	125,987,670	RGD:1600115	RefGenome
G	Eng	endoglin		ISO				RGD:1624291	RGD
G	Wnt7a	wingless-type MMTV integration site family, member 7A		ISO	4	125,541,281	125,586,167	RGD:1624291	RGD
G	Wnt7b	wingless-type MMTV integration site family, member 7B		ISO	7	123,533,713	123,554,333	RGD:1624291	RGD
G	Wnt7b	wingless-type MMTV integration site family, member 7B		IEA	7	123,533,713	123,554,333	RGD:1600115	ENSEMBL
negative regulation of vasculogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Xdh	xanthine dehydrogenase		ISO	6	21,417,685	21,590,015	RGD:1624291	RGD
G	Xdh	xanthine dehydrogenase		IEA	6	21,417,685	21,590,015	RGD:1600115	ENSEMBL
positive regulation of vasculogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Adm	adrenomedullin		ISO	1	168,380,255	168,382,426	RGD:1624291	RGD
G	Adm	adrenomedullin		IEA	1	168,380,255	168,382,426	RGD:1600115	ENSEMBL
G	Asb4	ankyrin repeat and SOCS box-containing 4		ISO	4	30,150,502	30,188,132	RGD:1624291	RGD
G	Asb4	ankyrin repeat and SOCS box-containing 4		IEA	4	30,150,502	30,188,132	RGD:1600115	ENSEMBL
G	Cd34	CD34 molecule		ISO	13	110,877,594	110,896,722	RGD:1624291	RGD
G	Cd34	CD34 molecule		ISS	13	110,877,594	110,896,722	RGD:1600115	UniProtKB
G	Ramp2	receptor (G protein-coupled) activity modifying protein 2		ISO	10	90,275,463	90,277,242	RGD:1624291	RGD
G	Ramp2	receptor (G protein-coupled) activity modifying protein 2		IEA	10	90,275,463	90,277,242	RGD:1600115	ENSEMBL
regulation of vasculogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hey1	hairy/enhancer-of-split related with YRPW motif 1		ISO	2	95,174,030	95,176,430	RGD:1624291	RGD
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		IEA	1	27,505,117	27,515,204	RGD:1600115	ENSEMBL
G	Hey2	hairy/enhancer-of-split related with YRPW motif 2		ISO	1	27,505,117	27,515,204	RGD:1624291	RGD
vasculogenesis involved in coronary vascular morphogenesis
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Notch1	notch 1		IEA	3	4,631,797	4,677,640	RGD:1600115	ENSEMBL
G	Notch1	notch 1		ISO	3	4,631,797	4,677,640	RGD:1624291	RGD

Term paths to the root

Path 1
Term	Annotations
biological_process	135981
developmental process	29436
anatomical structure formation involved in morphogenesis	2562
vasculogenesis	137
cell migration involved in vasculogenesis +	3
central nervous system vasculogenesis	6
negative regulation of vasculogenesis	2
positive regulation of vasculogenesis	8
regulation of vasculogenesis +	13
vasculogenesis involved in coronary vascular morphogenesis +	2
Path 2
Term	Annotations
biological_process	135981
multicellular organismal process	37010
single-multicellular organism process	35814
multicellular organismal development	24574
system development	21122
circulatory system development	3310
cardiovascular system development	3309
vasculature development	1485
blood vessel development	1329
blood vessel morphogenesis	1074
vasculogenesis	137
cell migration involved in vasculogenesis +	3
central nervous system vasculogenesis	6
negative regulation of vasculogenesis	2
positive regulation of vasculogenesis	8
regulation of vasculogenesis +	13
vasculogenesis involved in coronary vascular morphogenesis +	2