condensed nuclear chromosome - Ontology Report

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ONTOLOGY REPORT - ANNOTATIONS

Term:	condensed nuclear chromosome	go back to main search page
Accession:	GO:0000794	browse the term
Definition:	A highly compacted molecule of DNA and associated proteins resulting in a cytologically distinct structure that remains in the nucleus.
Comment:	Note that this term and its children can be used to annotate gene products that localize to a mitotic chromosome in an organism that undergoes a 'closed mitosis' in which the nuclear envelope does not break down during mitosis and for gene products that localize to a meiotic chromosome.
Synonyms:	related_synonym:	meiotic chromosome; nuclear mitotic chromosome

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condensed nuclear chromosome
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Add3	adducin 3 (gamma)		ISO	1	259,347,673	259,455,407	RGD:1624291	RGD
G	Add3	adducin 3 (gamma)		IEA	1	259,347,673	259,455,407	RGD:1600115	ENSEMBL
G	Brca1	breast cancer 1, early onset		ISO	10	90,513,630	90,572,676	RGD:1624291	RGD
G	Brca1	breast cancer 1, early onset		IEA	10	90,513,630	90,572,676	RGD:1600115	ENSEMBL
G	Brd4	bromodomain containing 4		ISO	7	12,772,428	12,853,406	RGD:1624291	RGD
G	Brd4	bromodomain containing 4		ISO	7	12,772,428	12,853,406	RGD:1624291	RGD
G	Brd4	bromodomain containing 4		ISO	7	12,772,428	12,853,406	RGD:1624291	RGD
G	Brd4	bromodomain containing 4		ISO	7	12,772,428	12,853,406	RGD:1624291	RGD
G	Brd4	bromodomain containing 4		IEA	7	12,772,428	12,853,406	RGD:1600115	ENSEMBL
G	Brd4	bromodomain containing 4		IEA	7	12,772,428	12,853,406	RGD:1600115	ENSEMBL
G	Cdx2	caudal type homeo box 2		ISO	12	8,296,103	8,303,643	RGD:1624291	RGD
G	Cdx2	caudal type homeo box 2		IEA	12	8,296,103	8,303,643	RGD:1600115	ENSEMBL
G	Chek1	checkpoint kinase 1		ISO	8	37,954,322	37,974,748	RGD:1624291	RGD
G	Chek1	checkpoint kinase 1		ISS	8	37,954,322	37,974,748	RGD:1600115	UniProtKB
G	Chmp1a	charged multivesicular body protein 1A		IEA	19	53,521,981	53,530,261	RGD:1600115	ENSEMBL
G	Chmp1a	charged multivesicular body protein 1A		ISO	19	53,521,981	53,530,261	RGD:1624291	RGD
G	Dmc1	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)		ISO	7	117,476,702	117,520,670	RGD:1624291	RGD
G	Dmc1	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)		ISO	7	117,476,702	117,520,670	RGD:1624291	RGD
G	Dmc1	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)		ISO	7	117,476,702	117,520,670	RGD:1624291	RGD
G	Dmc1	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination (yeast)		IEA	7	117,476,702	117,520,670	RGD:1600115	ENSEMBL
G	Dnmt3l	DNA (cytosine-5-)-methyltransferase 3-like		ISO	20	10,958,957	10,973,422	RGD:1624291	RGD
G	H2afx	H2A histone family, member X		ISO	8	47,312,609	47,313,938	RGD:1624291	RGD
G	H2afx	H2A histone family, member X		IEA	8	47,312,609	47,313,938	RGD:1600115	ENSEMBL
G	Hist1h1t	histone cluster 1, H1t		ISO	17	48,463,316	48,464,060	RGD:1624291	RGD
G	Kifap3	kinesin-associated protein 3		ISO	13	79,544,010	79,673,768	RGD:1624291	RGD
G	Lig3	ligase III, DNA, ATP-dependent		ISO	10	71,000,287	71,021,398	RGD:1624291	RGD
G	Lrpprc	leucine-rich pentatricopeptide repeat containing		ISO	6	8,086,606	8,168,261	RGD:1624291	RGD
G	Lrpprc	leucine-rich pentatricopeptide repeat containing		ISS	6	8,086,606	8,168,261	RGD:1600115	HGNC
G	Mki67ip	Mki67 (FHA domain) interacting nucleolar phosphoprotein		ISO	13	30,944,169	30,953,973	RGD:1624291	RGD
G	Mki67ip	Mki67 (FHA domain) interacting nucleolar phosphoprotein		IEA	13	30,944,169	30,953,973	RGD:1600115	ENSEMBL
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mre11a	MRE11 meiotic recombination 11 homolog A (S. cerevisiae)		IDA	8	11,588,409	11,632,483	RGD:2300257	RGD
G	Msh4	mutS homolog 4 (E. coli)		ISO	2	251,801,090	251,851,133	RGD:1624291	RGD
G	Nek2l1	NIMA (never in mitosis gene a)-related kinase 2-like 1		ISO	8	14,245,342	14,246,673	RGD:1624291	RGD
G	Nek2l1	NIMA (never in mitosis gene a)-related kinase 2-like 1		IEA	8	14,245,342	14,246,673	RGD:1600115	ENSEMBL
G	Nol6	nucleolar protein 6 (RNA-associated)		ISO	5	58,523,391	58,533,113	RGD:1624291	RGD
G	Rad50	RAD50 homolog (S. cerevisiae)		IDA	10	39,112,733	39,164,694	RGD:2300257	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)		ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)		ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)		ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rcc1	regulator of chromosome condensation 1		ISO				RGD:1624291	RGD
G	Rcc1	regulator of chromosome condensation 1		IEA				RGD:1600115	ENSEMBL
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Rpa1	replication protein A1		ISO	10	62,613,169	62,656,565	RGD:1624291	RGD
G	Rpa1	replication protein A1		ISO	10	62,613,169	62,656,565	RGD:1624291	RGD
G	Rpa1	replication protein A1		ISO	10	62,613,169	62,656,565	RGD:1624291	RGD
G	Rrs1	RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)		ISO	5	9,304,448	9,306,081	RGD:1624291	RGD
G	Sun2	Sad1 and UNC84 domain containing 2		ISO	7	117,962,517	117,978,876	RGD:1624291	RGD
G	Sun2	Sad1 and UNC84 domain containing 2		IEA	7	117,962,517	117,978,876	RGD:1600115	ENSEMBL
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Tex11	testis expressed 11		ISO	X	88,852,071	89,124,940	RGD:1624291	RGD
G	Topbp1	topoisomerase (DNA) II binding protein 1		ISO	8	108,316,569	108,360,753	RGD:1624291	RGD
G	Ttn	titin		ISO	3	59,404,023	59,665,308	RGD:1624291	RGD
G	Tubg1	tubulin, gamma 1		ISO	10	90,137,813	90,144,403	RGD:1624291	RGD
G	Tubg1	tubulin, gamma 1		IEA	10	90,137,813	90,144,403	RGD:1600115	ENSEMBL
central element
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Incenp	inner centromere protein		ISO	1	212,326,516	212,352,859	RGD:1624291	RGD
G	Incenp	inner centromere protein		IEA	1	212,326,516	212,352,859	RGD:1600115	ENSEMBL
G	Syce1	synaptonemal complex central element protein 1		ISO	1	200,930,362	200,941,365	RGD:1624291	RGD
G	Syce1	synaptonemal complex central element protein 1		IEA	1	200,930,362	200,941,365	RGD:1600115	ENSEMBL
G	Syce2	synaptonemal complex central element protein 2		ISO	19	24,925,123	24,943,271	RGD:1624291	RGD
G	Syce3	synaptonemal complex central element protein 3		ISO	7	127,684,549	127,710,970	RGD:1624291	RGD
G	Syce3	synaptonemal complex central element protein 3		IEA	7	127,684,549	127,710,970	RGD:1600115	ENSEMBL
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		IEA	2	197,989,614	198,164,611	RGD:1600115	ENSEMBL
G	Tex11	testis expressed 11		ISO	X	88,852,071	89,124,940	RGD:1624291	RGD
checkpoint clamp complex
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hus1	HUS1 checkpoint homolog (S. pombe)		IEA	14	89,527,997	89,542,730	RGD:1600115	InterPro
G	Hus1b	HUS1 checkpoint homolog b (S. pombe)		IEA	17	39,978,923	39,979,753	RGD:1600115	InterPro
G	Rad9a	RAD9 homolog A (S. pombe)		IEA	1	206,778,534	206,785,230	RGD:1600115	InterPro
G	Rad9b	RAD9 homolog B (S. pombe)		IEA	12	35,412,463	35,443,713	RGD:1600115	InterPro
chiasma
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		IEA	8	115,616,396	115,653,471	RGD:1600115	ENSEMBL
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		IBA	8	115,616,396	115,653,471	RGD:1600115	RefGenome
G	Mlh3	mutL homolog 3 (E. coli)		ISO	6	109,280,910	109,318,893	RGD:1624291	RGD
G	Mlh3	mutL homolog 3 (E. coli)		ISO	6	109,280,910	109,318,893	RGD:1624291	RGD
G	Mlh3	mutL homolog 3 (E. coli)		IBA	6	109,280,910	109,318,893	RGD:1600115	RefGenome
condensed nuclear chromosome kinetochore
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Bub1b	BUB1 mitotic checkpoint serine/threonine kinase B		IDA	3	105,063,018	105,116,145	RGD:2290270	MGI
G	Bub1b	BUB1 mitotic checkpoint serine/threonine kinase B		ISO	3	105,063,018	105,116,145	RGD:1624291	RGD
G	Cenpa	centromere protein A		ISO	6	25,686,603	25,693,840	RGD:1624291	RGD
G	Cenpa	centromere protein A		IEA	6	25,686,603	25,693,840	RGD:1600115	ENSEMBL
G	Cenpe	centromere protein E		ISO	2	232,699,627	232,758,329	RGD:1624291	RGD
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Rec8	REC8 homolog (yeast)		IEA	15	33,753,772	33,761,237	RGD:1600115	ENSEMBL
condensed nuclear chromosome outer kinetochore
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ccnb1	cyclin B1		ISO	2	31,574,600	31,581,784	RGD:1624291	RGD
G	Ccnb1	cyclin B1		IEA	2	31,574,600	31,581,784	RGD:1600115	ENSEMBL
G	Ndc80	NDC80 kinetochore complex component		ISO	9	110,702,935	110,718,894	RGD:1624291	RGD
G	Plk1	polo-like kinase 1		ISO	1	181,002,811	181,012,741	RGD:1624291	RGD
condensed nuclear chromosome, centromeric region
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Aurkb	aurora kinase B		ISO	10	55,798,710	55,804,367	RGD:1624291	RGD
G	Aurkb	aurora kinase B		IEA	10	55,798,710	55,804,367	RGD:1600115	ENSEMBL
G	Bub1	BUB1 mitotic checkpoint serine/threonine kinase		ISO	3	115,323,510	115,354,906	RGD:1624291	RGD
G	Bub1	BUB1 mitotic checkpoint serine/threonine kinase		IEA	3	115,323,510	115,354,906	RGD:1600115	ENSEMBL
G	Bub1	BUB1 mitotic checkpoint serine/threonine kinase		ISO	3	115,323,510	115,354,906	RGD:1624291	RGD
G	Cenpa	centromere protein A		ISO	6	25,686,603	25,693,840	RGD:1624291	RGD
G	Cenpc1	centromere protein C 1		ISO	14	23,771,576	23,829,980	RGD:1624291	RGD
G	Cenpc1	centromere protein C 1		IEA	14	23,771,576	23,829,980	RGD:1600115	ENSEMBL
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Sgol1	shugoshin-like 1 (S. pombe)		ISO	9	863,665	876,405	RGD:1624291	RGD
G	Sgol1	shugoshin-like 1 (S. pombe)		IEA	9	863,665	876,405	RGD:1600115	ENSEMBL
G	Ss18l1	synovial sarcoma translocation gene on chromosome 18-like 1		ISO	3	169,107,519	169,125,910	RGD:1624291	RGD
G	Ss18l1	synovial sarcoma translocation gene on chromosome 18-like 1		ISO	3	169,107,519	169,125,910	RGD:1624291	RGD
G	Ss18l1	synovial sarcoma translocation gene on chromosome 18-like 1		IEA	3	169,107,519	169,125,910	RGD:1600115	ENSEMBL
G	Suv420h1	suppressor of variegation 4-20 homolog 1 (Drosophila)		ISO	1	206,285,303	206,341,955	RGD:1624291	RGD
G	Suv420h1	suppressor of variegation 4-20 homolog 1 (Drosophila)		IEA	1	206,285,303	206,341,955	RGD:1600115	ENSEMBL
G	Suv420h2	suppressor of variegation 4-20 homolog 2 (Drosophila)		ISO	1	67,815,981	67,823,611	RGD:1624291	RGD
G	Suv420h2	suppressor of variegation 4-20 homolog 2 (Drosophila)		IEA	1	67,815,981	67,823,611	RGD:1600115	ENSEMBL
lateral element
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Blm	Bloom syndrome, RecQ helicase-like		ISO	1	136,271,573	136,358,077	RGD:1624291	RGD
G	Blm	Bloom syndrome, RecQ helicase-like		IEA	1	136,271,573	136,358,077	RGD:1600115	ENSEMBL
G	Incenp	inner centromere protein		IEA	1	212,326,516	212,352,859	RGD:1600115	ENSEMBL
G	Incenp	inner centromere protein		ISO	1	212,326,516	212,352,859	RGD:1624291	RGD
G	LOC100911267	DNA repair protein RAD51 homolog 1-like		IEA				RGD:1600115	ENSEMBL
G	Mei4	meiosis-specific, MEI4 homolog (S. cerevisiae)		ISO	8	86,961,505	87,136,942	RGD:1624291	RGD
G	Mei4	meiosis-specific, MEI4 homolog (S. cerevisiae)		IEA	8	86,961,505	87,136,942	RGD:1600115	ENSEMBL
G	Rad21l1	RAD21-like 1 (S. pombe)		ISO				RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)		ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rad51	RAD51 homolog (S. cerevisiae)		ISO	3	105,625,265	105,650,392	RGD:1624291	RGD
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Rec8	REC8 homolog (yeast)		IEA	15	33,753,772	33,761,237	RGD:1600115	ENSEMBL
G	Rpa1	replication protein A1		ISO	10	62,613,169	62,656,565	RGD:1624291	RGD
G	Rpa1	replication protein A1		IEA	10	62,613,169	62,656,565	RGD:1600115	ENSEMBL
G	Smc1b	structural maintenance of chromosomes 1B		ISO	7	123,078,896	123,140,078	RGD:1624291	RGD
G	Smc1b	structural maintenance of chromosomes 1B		IEA	7	123,078,896	123,140,078	RGD:1600115	ENSEMBL
G	Smc3	structural maintenance of chromosomes 3		ISO	1	259,822,480	259,865,602	RGD:1624291	RGD
G	Smc3	structural maintenance of chromosomes 3		IEA	1	259,822,480	259,865,602	RGD:1600115	ENSEMBL
G	Sycp2	synaptonemal complex protein 2		ISO	3	167,437,522	167,502,083	RGD:1624291	RGD
G	Sycp2	synaptonemal complex protein 2		ISO	3	167,437,522	167,502,083	RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		IEA				RGD:1600115	ENSEMBL
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
nuclear condensin complex
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Ncapd3	non-SMC condensin II complex, subunit D3		ISO	8	26,631,707	26,695,041	RGD:1624291	RGD
G	Ncapd3	non-SMC condensin II complex, subunit D3		IEA	8	26,631,707	26,695,041	RGD:1600115	ENSEMBL
nuclear meiotic cohesin complex
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Rad21	RAD21 homolog (S. pombe)		ISO	7	88,267,648	88,294,703	RGD:1624291	RGD
G	Rad21	RAD21 homolog (S. pombe)		IEA	7	88,267,648	88,294,703	RGD:1600115	ENSEMBL
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Rec8	REC8 homolog (yeast)		IEA	15	33,753,772	33,761,237	RGD:1600115	ENSEMBL
G	Smc1b	structural maintenance of chromosomes 1B		IEA	7	123,078,896	123,140,078	RGD:1600115	ENSEMBL
G	Smc1b	structural maintenance of chromosomes 1B		ISO	7	123,078,896	123,140,078	RGD:1624291	RGD
G	Smc3	structural maintenance of chromosomes 3		ISO	1	259,822,480	259,865,602	RGD:1624291	RGD
G	Smc3	structural maintenance of chromosomes 3		IEA	1	259,822,480	259,865,602	RGD:1600115	ENSEMBL
synaptonemal complex
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Hspa2	heat shock protein 2		ISO	6	99,000,541	99,003,041	RGD:1624291	RGD
G	Hspa2	heat shock protein 2		IEA	6	99,000,541	99,003,041	RGD:1600115	ENSEMBL
G	Incenp	inner centromere protein		ISO	1	212,326,516	212,352,859	RGD:1624291	RGD
G	Leprel4	leprecan-like 4		IDA	10	89,347,282	89,353,191	RGD:633987	RGD
G	Lig3	ligase III, DNA, ATP-dependent		ISO	10	71,000,287	71,021,398	RGD:1624291	RGD
G	Lig3	ligase III, DNA, ATP-dependent		IEA	10	71,000,287	71,021,398	RGD:1600115	ENSEMBL
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		ISO	8	115,616,396	115,653,471	RGD:1624291	RGD
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		IEA	8	115,616,396	115,653,471	RGD:1600115	ENSEMBL
G	Mlh1	mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)		IDA	8	115,616,396	115,653,471		MGI
G	Mlh3	mutL homolog 3 (E. coli)		ISO	6	109,280,910	109,318,893	RGD:1624291	RGD
G	Mlh3	mutL homolog 3 (E. coli)		ISO	6	109,280,910	109,318,893	RGD:1624291	RGD
G	Mlh3	mutL homolog 3 (E. coli)		IBA	6	109,280,910	109,318,893	RGD:1600115	RefGenome
G	Msh4	mutS homolog 4 (E. coli)		ISO	2	251,801,090	251,851,133	RGD:1624291	RGD
G	Msh4	mutS homolog 4 (E. coli)		ISO	2	251,801,090	251,851,133	RGD:1624291	RGD
G	Msh4	mutS homolog 4 (E. coli)		IBA	2	251,801,090	251,851,133	RGD:1600115	RefGenome
G	Msh5	mutS homolog 5 (E. coli)		ISO	20	3,845,731	3,862,011	RGD:1624291	RGD
G	Msh5	mutS homolog 5 (E. coli)		IBA	20	3,845,731	3,862,011	RGD:1600115	RefGenome
G	Rec8	REC8 homolog (yeast)		ISO	15	33,753,772	33,761,237	RGD:1624291	RGD
G	Smc1b	structural maintenance of chromosomes 1B		ISO	7	123,078,896	123,140,078	RGD:1624291	RGD
G	Smc1b	structural maintenance of chromosomes 1B		ISO	7	123,078,896	123,140,078	RGD:1624291	RGD
G	Stag3	stromal antigen 3		TAS	12	17,865,273	17,896,993	RGD:727325	RGD
G	Stag3	stromal antigen 3		ISO	12	17,865,273	17,896,993	RGD:1624291	RGD
G	Syce1	synaptonemal complex central element protein 1		IDA	1	200,930,362	200,941,365		MGI
G	Syce1l	synaptonemal complex central element protein 1-like		IEA	19	43,637,872	43,648,192	RGD:1600115	InterPro
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		IEA	2	197,989,614	198,164,611	RGD:1600115	InterPro
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp2	synaptonemal complex protein 2		IDA	3	167,437,522	167,502,083	RGD:69387	RGD
G	Sycp2	synaptonemal complex protein 2		ISO	3	167,437,522	167,502,083	RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Syn1	synapsin I		ISO	X	12,512,241	12,556,160	RGD:1624291	RGD
G	Syn1	synapsin I		IEA	X	12,512,241	12,556,160	RGD:1600115	ENSEMBL
G	Tex12	testis expressed 12		ISO	8	53,919,759	53,921,789	RGD:1624291	RGD
G	Tex12	testis expressed 12		IEA	8	53,919,759	53,921,789	RGD:1600115	ENSEMBL
G	Top2a	topoisomerase (DNA) II alpha		IBA	10	87,771,337	87,800,960	RGD:1600115	RefGenome
G	Wapal	wings apart-like homolog (Drosophila)		ISO	16	10,337,231	10,408,154	RGD:1624291	RGD
G	Wapal	wings apart-like homolog (Drosophila)		IEA	16	10,337,231	10,408,154	RGD:1600115	ENSEMBL
transverse filament
	Symbol	Object Name	GBrowse	Evidence	Chr	Start	Stop	Reference	Source
G	Stag3	stromal antigen 3		ISO	12	17,865,273	17,896,993	RGD:1624291	RGD
G	Stag3	stromal antigen 3		IEA	12	17,865,273	17,896,993	RGD:1600115	ENSEMBL
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		ISO	2	197,989,614	198,164,611	RGD:1624291	RGD
G	Sycp1	synaptonemal complex protein 1		IEA	2	197,989,614	198,164,611	RGD:1600115	ENSEMBL
G	Sycp3	synaptonemal complex protein 3		ISO				RGD:1624291	RGD
G	Sycp3	synaptonemal complex protein 3		IEA				RGD:1600115	ENSEMBL

Term paths to the root

Path 1
Term	Annotations
cellular_component	76599
organelle part	15018
intracellular organelle part	14509
nuclear part	6383
nuclear chromosome	676
condensed nuclear chromosome	203
checkpoint clamp complex	4
chiasma	8
condensed nuclear chromosome, centromeric region +	30
linear element	0
meiotic recombination initiation complex	0
nuclear cohesin complex +	8
nuclear condensin complex	2
pairing center	0
recombination nodule +	0
synaptonemal complex +	95
Path 2
Term	Annotations
cellular_component	76599
cell	60574
cell part	60566
intracellular	47239
intracellular part	46471
intracellular organelle	34832
intracellular membrane-bounded organelle	28638
nucleus	15149
nuclear part	6383
nuclear lumen	4823
nuclear chromosome	676
condensed nuclear chromosome	203
checkpoint clamp complex	4
chiasma	8
condensed nuclear chromosome, centromeric region +	30
linear element	0
meiotic recombination initiation complex	0
nuclear cohesin complex +	8
nuclear condensin complex	2
pairing center	0
recombination nodule +	0
synaptonemal complex +	95