quartz - Ontology Report - Rat Genome Database

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ONTOLOGY REPORT - ANNOTATIONS

Term:	quartz	go back to main search page
Accession:	CHEBI:46727	browse the term
Synonyms:	related_synonym:	O2Si; Quarz; Tiefquarz; alpha-quartz; silicon oxide
	xref_casrn:	14808-60-7
	xref:	ChemIDplus:14808-60-7 "CAS Registry Number"
	xref_mesh:	MESH:D011791
	xref:	NIST Chemistry WebBook:14808-60-7 "CAS Registry Number"

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quartz
	Symbol	Object Name	GBrowse	Qualifiers	Evidence	Chr	Start	Stop	Reference	Source
G	Anxa5	annexin A5		increases expression	ISO	2	122,949,210	122,979,757	RGD:6480464	CTD
G	Arg1	arginase, liver		increases expression	EXP	1	20,998,894	21,011,275	RGD:6480464	CTD
G	Atp1b1	ATPase, Na+/K+ transporting, beta 1 polypeptide		affects expression	EXP	13	80,214,056	80,234,576	RGD:6480464	CTD
G	Atp6v1b2	ATPase, H transporting, lysosomal V1 subunit B2		affects expression	EXP	16	22,320,425	22,344,445	RGD:6480464	CTD
G	C2cd4b	C2 calcium-dependent domain containing 4B		increases expression	EXP	8	72,110,481	72,111,976	RGD:6480464	CTD
G	C4bpa	complement component 4 binding protein, alpha		increases expression	EXP	13	43,552,947	43,588,565	RGD:6480464	CTD
G	Capg	capping protein (actin filament), gelsolin-like		affects expression	EXP	4	105,850,321	105,862,109	RGD:6480464	CTD
G	Cat	catalase		multiple interactions	ISO	3	88,654,077	88,686,212	RGD:6480464	CTD
G	Ccl17	chemokine (C-C motif) ligand 17		increases expression	EXP	19	10,641,376	10,642,827	RGD:6480464	CTD
G	Ccl2	chemokine (C-C motif) ligand 2		increases expression	EXP	10	70,256,263	70,258,061	RGD:6480464	CTD
G	Ccl3	chemokine (C-C motif) ligand 3		increases expression	EXP	10	71,744,559	71,746,109	RGD:6480464	CTD
G	Ccl7	chemokine (C-C motif) ligand 7		increases expression	EXP	10	70,267,281	70,269,131	RGD:6480464	CTD
G	Ccna2	cyclin A2		increases expression	EXP	2	123,062,752	123,069,085	RGD:6480464	CTD
G	Ceacam10	carcinoembryonic antigen-related cell adhesion molecule 10		increases expression	EXP	1	80,070,252	80,076,528	RGD:6480464	CTD
G	Cfi	complement factor I		increases expression	EXP	2	227,281,621	227,325,109	RGD:6480464	CTD
G	Ch25h	cholesterol 25-hydroxylase		increases expression	EXP	1	238,457,017	238,458,335	RGD:6480464	CTD
G	Chia	chitinase, acidic		increases expression	EXP	2	201,385,584	201,431,777	RGD:6480464	CTD
G	Cpb2	carboxypeptidase B2 (plasma)		increases expression	EXP	15	56,104,920	56,154,321	RGD:6480464	CTD
G	Ctsk	cathepsin K		increases expression	EXP	2	190,394,854	190,405,668	RGD:6480464	CTD
G	Cxcl1	chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)		increases expression	EXP	14	18,690,339	18,692,118	RGD:6480464	CTD
G	Cxcl2	chemokine (C-X-C motif) ligand 2		multiple interactions	EXP	14	18,677,129	18,679,175	RGD:6480464	CTD
G	Cxcl2	chemokine (C-X-C motif) ligand 2		increases expression	EXP	14	18,677,129	18,679,175	RGD:6480464	CTD
G	Cxcl5	chemokine (C-X-C motif) ligand 5		increases expression	EXP	14	18,825,357	18,826,269	RGD:6480464	CTD
G	Cyp2e1	cytochrome P450, family 2, subfamily e, polypeptide 1		decreases expression	EXP	1	200,918,521	200,928,919	RGD:6480464	CTD
G	Fabp4	fatty acid binding protein 4, adipocyte		increases expression	EXP	2	93,536,133	93,540,734	RGD:6480464	CTD
G	Fcgr2b	Fc fragment of IgG, low affinity IIb, receptor (CD32)		increases expression	EXP	13	86,809,011	86,823,599	RGD:6480464	CTD
G	Fgg	fibrinogen gamma chain		increases expression	EXP	2	174,727,312	174,734,594	RGD:6480464	CTD
G	G6pd	glucose-6-phosphate dehydrogenase		multiple interactions	ISO	X	160,186,450	160,192,316	RGD:6480464	CTD
G	G6pd	glucose-6-phosphate dehydrogenase		decreases activity	ISO	X	160,186,450	160,192,316	RGD:6480464	CTD
G	Hapln4	hyaluronan and proteoglycan link protein 4		affects expression	EXP	16	19,816,321	19,824,506	RGD:6480464	CTD
G	Hmox1	heme oxygenase (decycling) 1		multiple interactions	EXP	19	13,963,139	13,969,960	RGD:6480464	CTD
G	Hmox1	heme oxygenase (decycling) 1		increases expression	EXP	19	13,963,139	13,969,960	RGD:6480464	CTD
G	Hmox1	heme oxygenase (decycling) 1		increases expression	EXP	19	13,963,139	13,969,960	RGD:6480464	CTD
G	Hmox1	heme oxygenase (decycling) 1		increases expression	EXP	19	13,963,139	13,969,960	RGD:6480464	CTD
G	Hmox1	heme oxygenase (decycling) 1		increases expression	EXP	19	13,963,139	13,969,960	RGD:6480464	CTD
G	Hp	haptoglobin		increases expression	EXP	19	39,443,016	39,447,566	RGD:6480464	CTD
G	Ifng	interferon gamma		multiple interactions	ISO	7	57,621,756	57,625,792	RGD:6480464	CTD
G	Il1b	interleukin 1 beta		increases secretion	ISO	3	116,964,422	116,970,867	RGD:6480464	CTD
G	Il1r2	interleukin 1 receptor, type II		increases expression	EXP	9	39,279,397	39,319,672	RGD:6480464	CTD
G	Itgam	integrin, alpha M		increases expression	EXP	1	187,334,413	187,385,583	RGD:6480464	CTD
G	Lcn2	lipocalin 2		increases expression	EXP	3	11,511,402	11,514,747	RGD:6480464	CTD
G	Mal2	mal, T-cell differentiation protein 2		affects expression	EXP	7	90,945,459	90,978,439	RGD:6480464	CTD
G	Mir17-1	microRNA mir-17-1		increases expression	EXP				RGD:6480464	CTD
G	Mir26a	microRNA mir-26a		decreases expression	EXP				RGD:6480464	CTD
G	Mmp12	matrix metallopeptidase 12		increases expression	EXP	8	4,249,938	4,259,675	RGD:6480464	CTD
G	Msr1	macrophage scavenger receptor 1		increases expression	EXP	16	56,278,223	56,345,472	RGD:6480464	CTD
G	Noxo1	NADPH oxidase organizer 1		increases expression	EXP	10	13,949,293	13,953,880	RGD:6480464	CTD
G	Plaur	plasminogen activator, urokinase receptor		affects expression	EXP	1	79,708,646	79,712,881	RGD:6480464	CTD
G	Prdx5	peroxiredoxin 5		affects expression	EXP	1	209,583,414	209,586,399	RGD:6480464	CTD
G	Ptgs2	prostaglandin-endoperoxide synthase 2		multiple interactions	EXP	13	64,427,288	64,432,978	RGD:6480464	CTD
G	Ptgs2	prostaglandin-endoperoxide synthase 2		increases expression	EXP	13	64,427,288	64,432,978	RGD:6480464	CTD
G	Ptgs2	prostaglandin-endoperoxide synthase 2		multiple interactions	ISO	13	64,427,288	64,432,978	RGD:6480464	CTD
G	Ptgs2	prostaglandin-endoperoxide synthase 2		increases expression	ISO	13	64,427,288	64,432,978	RGD:6480464	CTD
G	Ptgs2	prostaglandin-endoperoxide synthase 2		multiple interactions	EXP	13	64,427,288	64,432,978	RGD:6480464	CTD
G	Ptgs2	prostaglandin-endoperoxide synthase 2		increases expression	EXP	13	64,427,288	64,432,978	RGD:6480464	CTD
G	Retnla	resistin like alpha		affects expression	EXP	11	53,205,246	53,206,745	RGD:6480464	CTD
G	S100a9	S100 calcium binding protein A9		increases expression	EXP	2	182,985,466	182,988,147	RGD:6480464	CTD
G	Sdf2l1	stromal cell-derived factor 2-like 1		affects expression	EXP	11	85,878,093	85,880,335	RGD:6480464	CTD
G	Serpina10	serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10		increases expression	EXP	6	127,887,684	127,896,122	RGD:6480464	CTD
G	Slc26a4	solute carrier family 26, member 4		increases expression	EXP	6	49,389,212	49,427,000	RGD:6480464	CTD
G	Sod2	superoxide dismutase 2, mitochondrial		increases expression	EXP	1	41,862,997	41,870,327	RGD:6480464	CTD
G	Spp1	secreted phosphoprotein 1		increases expression	EXP				RGD:6480464	CTD
G	Tfrc	transferrin receptor		increases expression	EXP	11	69,976,258	69,998,098	RGD:6480464	CTD
G	Tiam1	T-cell lymphoma invasion and metastasis 1		increases expression	EXP	11	30,123,752	30,252,936	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		multiple interactions	ISO	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases expression	ISO	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases secretion	ISO	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		multiple interactions	EXP	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases activity	EXP	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases expression	EXP	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases secretion	EXP	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases expression	EXP	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases secretion	ISO	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases secretion	ISO	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases secretion	ISO	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tnf	tumor necrosis factor		increases expression	EXP	20	3,661,000	3,663,618	RGD:6480464	CTD
G	Tp53	tumor protein p53		increases expression	EXP	10	56,399,721	56,411,150	RGD:6480464	CTD
G	Tp53	tumor protein p53		increases mutagenesis	EXP	10	56,399,721	56,411,150	RGD:6480464	CTD
G	Trem2	triggering receptor expressed on myeloid cells 2		increases expression	EXP	9	8,059,023	8,065,585	RGD:6480464	CTD

Term paths to the root

Path 1
Term	Annotations
CHEBI ontology	492574
chemical entity	492574
molecular entity	475835
inorganic molecular entity	327419
inorganic oxide	5957
oxide mineral	79
quartz	79
Path 2
Term	Annotations
CHEBI ontology	492574
subatomic particle	491537
composite particle	491537
hadron	491537
baryon	491537
nucleon	491537
atomic nucleus	491537
atom	491537
main group element atom	461203
main group molecular entity	456122
p-block molecular entity	455185
chalcogen molecular entity	313637
oxygen molecular entity	300604
oxide	9228
inorganic oxide	5957
silicon oxide	911
silicon dioxide	911
quartz	79