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Term:beta-carotene
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Accession:CHEBI:17579 term browser browse the term
Definition:A cyclic carotene obtained by dimerisation of all-trans-retinol. A strongly-coloured red-orange pigment abundant in plants and fruit and the most active and important provitamin A carotenoid.
Synonyms:related_synonym: 1,1'-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaene-1,18-diyl]bis(2,6,6-trimethylcyclohexene);   C40H56;   CC(\\C=C\\C=C(C)\\C=C\\C1=C(C)CCCC1(C)C)=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1=C(C)CCCC1(C)C;   InChI=1S/C40H56/c1-31(19-13-21-33(3)25-27-37-35(5)23-15-29-39(37,7)8)17-11-12-18-32(2)20-14-22-34(4)26-28-38-36(6)24-16-30-40(38,9)10/h11-14,17-22,25-28H,15-16,23-24,29-30H2,1-10H3/b12-11+,19-13+,20-14+,27-25+,28-26+,31-17+,32-18+,33-21+,34-22+;   InChIKey=OENHQHLEOONYIE-JLTXGRSLSA-N;   all-trans-beta-carotene;   beta-Karotin
 alt_id: CHEBI:10355;   CHEBI:12392;   CHEBI:22834;   CHEBI:40987
 xref_casrn: 7235-40-7
 xref: Beilstein:1917416 "Beilstein Registry Number";   COMe:MOL000093 "COMe";   ChEMBL:355373 "ChEMBL COMPOUND";   ChemIDplus:7235-40-7 "CAS Registry Number";   CiteXplore:11171227 "PubMed citation";   CiteXplore:11182771 "PubMed citation";   CiteXplore:11332447 "PubMed citation";   CiteXplore:11359610 "PubMed citation";   CiteXplore:11382814 "PubMed citation";   CiteXplore:11567548 "PubMed citation";   CiteXplore:11677037 "PubMed citation";   CiteXplore:11714348 "PubMed citation";   CiteXplore:11962062 "PubMed citation";   CiteXplore:12081834 "PubMed citation";   CiteXplore:12891827 "PubMed citation";   CiteXplore:14658721 "PubMed citation";   CiteXplore:14764912 "PubMed citation";   CiteXplore:14976384 "PubMed citation";   CiteXplore:14997360 "PubMed citation";   CiteXplore:15113067 "PubMed citation";   CiteXplore:15333155 "PubMed citation";   CiteXplore:15695449 "PubMed citation";   CiteXplore:15789045 "PubMed citation";   CiteXplore:15909543 "PubMed citation";   CiteXplore:15949680 "PubMed citation";   CiteXplore:15949683 "PubMed citation";   CiteXplore:16036331 "PubMed citation";   CiteXplore:16087476 "PubMed citation";   CiteXplore:16338959 "PubMed citation";   CiteXplore:16563447 "PubMed citation";   CiteXplore:17004738 "PubMed citation";   CiteXplore:17625873 "PubMed citation";   CiteXplore:17708644 "PubMed citation";   CiteXplore:17851775 "PubMed citation";   CiteXplore:18429004 "PubMed citation";   CiteXplore:18766464 "PubMed citation";   CiteXplore:18767554 "PubMed citation";   CiteXplore:18794175 "PubMed citation";   CiteXplore:19480350 "PubMed citation";   CiteXplore:19574250 "PubMed citation";   CiteXplore:19669835 "PubMed citation";   CiteXplore:19703237 "PubMed citation";   CiteXplore:19852884 "PubMed citation";   CiteXplore:19888275 "PubMed citation";   CiteXplore:19896667 "PubMed citation";   CiteXplore:19937581 "PubMed citation";   CiteXplore:20074992 "PubMed citation";   CiteXplore:20515074 "PubMed citation";   CiteXplore:22079732 "PubMed citation";   CiteXplore:22309480 "PubMed citation";   CiteXplore:22428124 "PubMed citation";   CiteXplore:22489215 "PubMed citation";   CiteXplore:22534340 "PubMed citation";   CiteXplore:22575730 "PubMed citation";   HMDB:HMDB00561 "HMDB";   KEGG COMPOUND:7235-40-7 "CAS Registry Number";   KEGG COMPOUND:C02094 "KEGG COMPOUND";   KEGG DRUG:D03101 "KEGG DRUG";   LIPID MAPS:LMPR01070000 "LIPID MAPS instance";   LIPID MAPS:LMPR01070001 "LIPID MAPS instance"
 xref_mesh: MESH:D019207
 xref: MetaCyc:CPD1F-129 "MetaCyc";   NIST Chemistry WebBook:7235-40-7 "CAS Registry Number";   PDBeChem:BCR "PDBeChem";   Reaxys:1917416 "Reaxys Registry Number";   Wikipedia:Beta_Carotene "Wikipedia"

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beta-carotene term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide GBrowse link increases expression ISO 2 235,979,108 235,991,515 RGD:6480464 CTD
G Adipoq adiponectin, C1Q and collagen domain containing GBrowse link decreases expression ISO 11 79,908,291 79,911,065 RGD:6480464 CTD
G Aldh3b1 aldehyde dehydrogenase 3 family, member B1 GBrowse link decreases expression ISO 1 206,438,325 206,455,477 RGD:6480464 CTD
G Aldh4a1 aldehyde dehydrogenase 4 family, member A1 GBrowse link decreases expression ISO 5 158,437,691 158,453,827 RGD:6480464 CTD
G Ank2 ankyrin 2, neuronal GBrowse link increases expression ISO 2 224,182,431 224,501,751 RGD:6480464 CTD
G Ank3 ankyrin 3, node of Ranvier (ankyrin G) GBrowse link increases expression ISO 20 19,328,684 19,828,196 RGD:6480464 CTD
G Asah1 N-acylsphingosine amidohydrolase (acid ceramidase) 1 GBrowse link increases expression ISO 16 54,279,253 54,311,084 RGD:6480464 CTD
G Asb1 ankyrin repeat and SOCS box-containing 1 GBrowse link increases expression ISO 9 90,758,693 90,774,541 RGD:6480464 CTD
G Asb9 ankyrin repeat and SOCS box-containing 9 GBrowse link increases expression ISO X 50,712,265 50,748,863 RGD:6480464 CTD
G Bag3 Bcl2-associated athanogene 3 GBrowse link decreases expression ISO 1 187,781,147 187,804,835 RGD:6480464 CTD
G Bag4 BCL2-associated athanogene 4 GBrowse link decreases expression ISO 16 70,663,821 70,680,671 RGD:6480464 CTD
G Bag5 BCL2-associated athanogene 5 GBrowse link decreases expression ISO 6 136,491,438 136,495,093 RGD:6480464 CTD
G Bax Bcl2-associated X protein GBrowse link decreases expression ISO 1 95,933,023 95,938,176 RGD:6480464 CTD
G Bax Bcl2-associated X protein GBrowse link increases expression ISO 1 95,933,023 95,938,176 RGD:6480464 CTD
G Bcmo1 beta-carotene 15,15'-monooxygenase 1 GBrowse link multiple interactions ISO 19 47,202,955 47,239,225 RGD:6480464 CTD
G Bcmo1 beta-carotene 15,15'-monooxygenase 1 GBrowse link multiple interactions EXP 19 47,202,955 47,239,225 RGD:6480464 CTD
G Bcmo1 beta-carotene 15,15'-monooxygenase 1 GBrowse link increases expression ISO 19 47,202,955 47,239,225 RGD:6480464 CTD
G Bcmo1 beta-carotene 15,15'-monooxygenase 1 GBrowse link increases oxidation EXP 19 47,202,955 47,239,225 RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link multiple interactions ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link increases metabolic processing ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Casp3 caspase 3 GBrowse link multiple interactions ISO 16 48,944,226 48,962,420 RGD:6480464 CTD
G Casp3 caspase 3 GBrowse link increases activity ISO 16 48,944,226 48,962,420 RGD:6480464 CTD
G Cat catalase GBrowse link multiple interactions EXP 3 88,654,077 88,686,212 RGD:6480464 CTD
G Cat catalase GBrowse link multiple interactions EXP 3 88,654,077 88,686,212 RGD:6480464 CTD
G Cdh1 cadherin 1 GBrowse link increases expression ISO 19 36,442,693 36,512,091 RGD:6480464 CTD
G Cebpa CCAAT/enhancer binding protein (C/EBP), alpha GBrowse link decreases expression ISO 1 87,626,111 87,627,499 RGD:6480464 CTD
G Cflar CASP8 and FADD-like apoptosis regulator GBrowse link increases expression ISO 9 57,309,836 57,356,635 RGD:6480464 CTD
G Cldn10 claudin 10 GBrowse link increases expression ISO 15 103,699,243 103,793,405 RGD:6480464 CTD
G Cldn18 claudin 18 GBrowse link increases expression ISO 8 104,560,892 104,578,313 RGD:6480464 CTD
G Col1a1 collagen, type I, alpha 1 GBrowse link decreases expression ISO 10 83,622,438 83,639,368 RGD:6480464 CTD
G Col4a1 collagen, type IV, alpha 1 GBrowse link decreases expression ISO 16 83,045,183 83,157,835 RGD:6480464 CTD
G Col4a2 collagen, type IV, alpha 2 GBrowse link decreases expression ISO 16 82,899,206 83,045,102 RGD:6480464 CTD
G Cpt1b carnitine palmitoyltransferase 1b, muscle GBrowse link decreases expression ISO 7 127,737,129 127,746,179 RGD:6480464 CTD
G Cradd CASP2 and RIPK1 domain containing adaptor with death domain GBrowse link increases expression ISO 7 32,504,279 32,517,581 RGD:6480464 CTD
G Ctsb cathepsin B GBrowse link decreases expression ISO 15 42,402,829 42,423,701 RGD:6480464 CTD
G Cxcl12 chemokine (C-X-C motif) ligand 12 GBrowse link increases expression ISO 4 153,503,576 153,516,423 RGD:6480464 CTD
G Cxcl9 chemokine (C-X-C motif) ligand 9 GBrowse link increases expression ISO 14 17,284,085 17,288,996 RGD:6480464 CTD
G Cxcr4 chemokine (C-X-C motif) receptor 4 GBrowse link increases expression ISO 13 41,308,286 41,312,190 RGD:6480464 CTD
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 GBrowse link increases expression ISO 1 241,945,472 241,949,220 RGD:6480464 CTD
G Cyp26a1 cytochrome P450, family 26, subfamily a, polypeptide 1 GBrowse link increases expression ISO 1 241,945,472 241,949,220 RGD:6480464 CTD
G Cyp2c11 cytochrome P450, subfamily 2, polypeptide 11 GBrowse link increases expression ISO 1 243,281,320 243,320,945 RGD:6480464 CTD
G Cyp3a2 cytochrome P450, family 3, subfamily a, polypeptide 2 GBrowse link multiple interactions ISO 12 9,517,016 9,541,000 RGD:6480464 CTD
G Dlx2 distal-less homeobox 2 GBrowse link increases expression ISO 3 53,852,209 53,854,092 RGD:6480464 CTD
G Dlx4 distal-less homeobox 4 GBrowse link increases expression ISO 10 83,822,815 83,828,210 RGD:6480464 CTD
G Ercc2 excision repair cross-complementing rodent repair deficiency, complementation group 2 decreases expression ISO RGD:6480464 CTD
G Esr1 estrogen receptor 1 GBrowse link multiple interactions ISO 1 35,523,680 35,759,891 RGD:6480464 CTD
G Esr1 estrogen receptor 1 GBrowse link multiple interactions ISO 1 35,523,680 35,759,891 RGD:6480464 CTD
G Esr2 estrogen receptor 2 (ER beta) GBrowse link multiple interactions ISO 6 98,691,167 98,775,299 RGD:6480464 CTD
G Fabp4 fatty acid binding protein 4, adipocyte GBrowse link decreases expression ISO 2 93,536,133 93,540,734 RGD:6480464 CTD
G Faim2 Fas apoptotic inhibitory molecule 2 GBrowse link increases expression ISO 7 138,246,372 138,272,190 RGD:6480464 CTD
G Fas Fas (TNF receptor superfamily, member 6) GBrowse link increases expression ISO 1 238,259,443 238,274,745 RGD:6480464 CTD
G Fosl1 fos-like antigen 1 GBrowse link increases expression ISO 1 208,090,612 208,099,118 RGD:6480464 CTD
G Foxa1 forkhead box A1 GBrowse link increases expression ISO 6 77,976,384 78,009,176 RGD:6480464 CTD
G Gata6 GATA binding protein 6 GBrowse link increases expression ISO 18 2,504,264 2,534,648 RGD:6480464 CTD
G Gbp1 guanylate binding protein 1, interferon-inducible GBrowse link increases expression ISO 2 240,715,506 240,739,741 RGD:6480464 CTD
G Gja1 gap junction protein, alpha 1 GBrowse link multiple interactions ISO 20 35,409,815 35,422,262 RGD:6480464 CTD
G Gja1 gap junction protein, alpha 1 GBrowse link increases expression ISO 20 35,409,815 35,422,262 RGD:6480464 CTD
G Gstk1 glutathione S-transferase kappa 1 GBrowse link decreases expression ISO 4 69,999,767 70,004,086 RGD:6480464 CTD
G Gstm2 glutathione S-transferase mu 2 GBrowse link increases expression ISO 2 203,549,022 203,553,380 RGD:6480464 CTD
G Gstm4 glutathione S-transferase mu 4 GBrowse link decreases expression ISO 2 203,605,593 203,610,817 RGD:6480464 CTD
G Gstz1 glutathione S-transferase zeta 1 decreases expression ISO RGD:6480464 CTD
G Hoxa7 homeobox A7 GBrowse link increases expression ISO 4 80,515,622 80,517,521 RGD:6480464 CTD
G Hoxb6 homeo box B6 GBrowse link increases expression ISO 10 85,030,558 85,033,604 RGD:6480464 CTD
G Hoxc10 homeo box C10 GBrowse link increases expression ISO 7 141,717,910 141,734,613 RGD:6480464 CTD
G Hprt1 hypoxanthine phosphoribosyltransferase 1 GBrowse link multiple interactions EXP X 139,929,647 139,961,616 RGD:6480464 CTD
G Ifna16l1 interferon, alpha 16-like 1 GBrowse link increases expression ISO 5 108,070,121 108,070,696 RGD:6480464 CTD
G Il1b interleukin 1 beta GBrowse link multiple interactions ISO 3 116,964,422 116,970,867 RGD:6480464 CTD
G Irf8 interferon regulatory factor 8 GBrowse link increases expression ISO 19 51,100,088 51,116,730 RGD:6480464 CTD
G Irx4 iroquois homeobox 4 GBrowse link decreases expression ISO 17 106,225 116,183 RGD:6480464 CTD
G Itgb1 integrin, beta 1 GBrowse link decreases expression ISO 19 58,600,095 58,647,531 RGD:6480464 CTD
G Itgb4 integrin, beta 4 GBrowse link decreases expression ISO 10 106,080,452 106,116,632 RGD:6480464 CTD
G Ivl involucrin GBrowse link increases expression ISO 2 185,556,271 185,558,310 RGD:6480464 CTD
G Jun jun proto-oncogene GBrowse link increases expression ISO 5 115,358,166 115,361,259 RGD:6480464 CTD
G Krt18 keratin 18 increases expression ISO RGD:6480464 CTD
G Krt19 keratin 19 GBrowse link increases expression ISO 10 89,080,953 89,085,670 RGD:6480464 CTD
G Krt2 keratin 2 GBrowse link increases expression ISO 7 140,500,902 140,507,590 RGD:6480464 CTD
G Krt7 keratin 7 GBrowse link affects expression ISO 7 140,160,829 140,226,474 RGD:6480464 CTD
G Krt8 keratin 8 GBrowse link decreases expression ISO 7 140,713,902 140,721,199 RGD:6480464 CTD
G Lhx3 LIM homeobox 3 GBrowse link increases expression ISO 3 4,381,890 4,389,132 RGD:6480464 CTD
G Lpl lipoprotein lipase GBrowse link decreases expression ISO 16 22,533,105 22,556,905 RGD:6480464 CTD
G Mapk1 mitogen activated protein kinase 1 GBrowse link increases phosphorylation ISO 11 85,968,732 86,030,387 RGD:6480464 CTD
G Mapk3 mitogen activated protein kinase 3 GBrowse link increases phosphorylation ISO 1 185,935,044 185,941,245 RGD:6480464 CTD
G Mbl2 mannose-binding lectin (protein C) 2 GBrowse link multiple interactions ISO 1 233,978,931 233,983,824 RGD:6480464 CTD
G Mcl1 myeloid cell leukemia sequence 1 affects expression ISO RGD:6480464 CTD
G Meis2 Meis homeobox 2 GBrowse link increases expression ISO 3 101,915,966 102,117,215 RGD:6480464 CTD
G Meox1 mesenchyme homeobox 1 GBrowse link increases expression ISO 10 90,921,589 90,942,298 RGD:6480464 CTD
G Mgmt O-6-methylguanine-DNA methyltransferase GBrowse link affects response to substance ISO 1 196,629,366 196,866,937 RGD:6480464 CTD
G Msh5 mutS homolog 5 (E. coli) GBrowse link increases expression ISO 20 3,845,731 3,862,011 RGD:6480464 CTD
G Muc5ac mucin 5AC, oligomeric mucus/gel-forming increases expression ISO RGD:6480464 CTD
G Nos1 nitric oxide synthase 1, neuronal GBrowse link increases expression ISO 12 39,812,500 39,869,484 RGD:6480464 CTD
G Nos2 nitric oxide synthase 2, inducible GBrowse link multiple interactions EXP 10 65,036,884 65,072,453 RGD:6480464 CTD
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 GBrowse link multiple interactions ISO 11 64,239,918 64,276,702 RGD:6480464 CTD
G Nr1i2 nuclear receptor subfamily 1, group I, member 2 GBrowse link increases activity ISO 11 64,239,918 64,276,702 RGD:6480464 CTD
G Olr1 oxidized low density lipoprotein (lectin-like) receptor 1 GBrowse link increases expression ISO 4 166,747,228 166,769,340 RGD:6480464 CTD
G Pcdhgc3 protocadherin gamma subfamily C, 3 GBrowse link increases expression ISO 18 30,714,544 30,754,205 RGD:6480464 CTD
G Pik3r5 phosphoinositide-3-kinase, regulatory subunit 5 GBrowse link increases expression ISO 10 55,227,872 55,248,301 RGD:6480464 CTD
G Plscr1 phospholipid scramblase 1 GBrowse link increases expression ISO 8 97,206,388 97,226,725 RGD:6480464 CTD
G Plscr3 phospholipid scramblase 3 GBrowse link increases expression ISO 10 56,687,086 56,691,601 RGD:6480464 CTD
G Plscr4 phospholipid scramblase 4 GBrowse link increases expression ISO 8 97,428,403 97,466,096 RGD:6480464 CTD
G Ppara peroxisome proliferator activated receptor alpha GBrowse link decreases expression ISO 7 123,729,774 123,807,090 RGD:6480464 CTD
G Pparg peroxisome proliferator-activated receptor gamma GBrowse link decreases expression ISO 4 151,492,220 151,617,331 RGD:6480464 CTD
G Rad51ap1 RAD51 associated protein 1 GBrowse link decreases expression ISO 4 163,308,788 163,321,854 RGD:6480464 CTD
G Rad51d RAD51 homolog D (S. cerevisiae) GBrowse link increases expression ISO 10 71,092,798 71,107,418 RGD:6480464 CTD
G Rara retinoic acid receptor, alpha GBrowse link decreases expression ISO 10 87,740,479 87,753,265 RGD:6480464 CTD
G Rarb retinoic acid receptor, beta increases expression ISO RGD:6480464 CTD
G Rarres1 retinoic acid receptor responder (tazarotene induced) 1 GBrowse link increases expression ISO 2 157,332,213 157,367,137 RGD:6480464 CTD
G Rbp4 retinol binding protein 4, plasma GBrowse link multiple interactions ISO 1 242,443,795 242,450,997 RGD:6480464 CTD
G Rbp4 retinol binding protein 4, plasma GBrowse link multiple interactions ISO 1 242,443,795 242,450,997 RGD:6480464 CTD
G Rxra retinoid X receptor alpha GBrowse link multiple interactions ISO 3 6,605,782 6,689,224 RGD:6480464 CTD
G Scarb1 scavenger receptor class B, member 1 GBrowse link increases transport ISO 12 32,390,183 32,457,661 RGD:6480464 CTD
G Six6 SIX homeobox 6 GBrowse link increases expression ISO 6 95,358,546 95,363,526 RGD:6480464 CTD
G Slc2a4 solute carrier family 2 (facilitated glucose transporter), member 4 GBrowse link decreases expression ISO 10 56,786,705 56,792,209 RGD:6480464 CTD
G Sod1 superoxide dismutase 1, soluble GBrowse link decreases expression ISO 11 29,810,766 29,816,342 RGD:6480464 CTD
G Sod2 superoxide dismutase 2, mitochondrial GBrowse link multiple interactions EXP 1 41,862,997 41,870,327 RGD:6480464 CTD
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 GBrowse link affects expression ISO 6 111,546,037 111,622,959 RGD:6480464 CTD
G Srebf1 sterol regulatory element binding transcription factor 1 GBrowse link increases expression ISO 10 46,461,684 46,483,646 RGD:6480464 CTD
G Tgm2 transglutaminase 2, C polypeptide GBrowse link increases expression ISO 3 148,832,866 148,862,385 RGD:6480464 CTD
G Tgm4 transglutaminase 4 (prostate) GBrowse link increases expression ISO 8 127,782,460 127,819,491 RGD:6480464 CTD
G Tnf tumor necrosis factor GBrowse link multiple interactions ISO 20 3,661,000 3,663,618 RGD:6480464 CTD
G Tnf tumor necrosis factor GBrowse link multiple interactions ISO 20 3,661,000 3,663,618 RGD:6480464 CTD
G Tnf tumor necrosis factor GBrowse link multiple interactions ISO 20 3,661,000 3,663,618 RGD:6480464 CTD
G Tnfrsf9 tumor necrosis factor receptor superfamily, member 9 GBrowse link increases expression ISO 5 168,071,159 168,099,501 RGD:6480464 CTD
G Tnfsf10 tumor necrosis factor (ligand) superfamily, member 10 GBrowse link increases expression ISO 2 113,204,303 113,221,550 RGD:6480464 CTD
G Txndc9 thioredoxin domain containing 9 GBrowse link increases expression ISO 9 36,926,559 36,936,470 RGD:6480464 CTD
G Xrcc3 X-ray repair complementing defective repair in Chinese hamster cells 3 GBrowse link increases expression ISO 6 136,594,276 136,602,069 RGD:6480464 CTD
astaxanthin term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Aifm1 apoptosis-inducing factor, mitochondrion-associated 1 GBrowse link multiple interactions ISO X 134,868,878 134,908,166 RGD:6480464 CTD
G App amyloid beta (A4) precursor protein GBrowse link multiple interactions ISO 11 24,457,855 24,693,851 RGD:6480464 CTD
G C1qa complement component 1, q subcomponent, A chain GBrowse link decreases expression ISO 5 155,662,333 155,665,180 RGD:6480464 CTD
G Cat catalase GBrowse link multiple interactions ISO 3 88,654,077 88,686,212 RGD:6480464 CTD
G Cntd1 cyclin N-terminal domain containing 1 GBrowse link multiple interactions ISO 10 90,308,109 90,316,974 RGD:6480464 CTD
G Cox15 cytochrome c oxidase assembly homolog 15 (yeast) GBrowse link multiple interactions ISO 1 247,077,102 247,093,757 RGD:6480464 CTD
G Cox5a cytochrome c oxidase, subunit Va GBrowse link multiple interactions ISO 8 61,264,971 61,276,380 RGD:6480464 CTD
G Cox5b cytochrome c oxidase subunit Vb GBrowse link multiple interactions ISO 9 35,625,478 35,627,304 RGD:6480464 CTD
G Cox6b1 cytochrome c oxidase subunit VIb polypeptide 1 GBrowse link multiple interactions ISO 1 85,669,891 85,677,195 RGD:6480464 CTD
G Cox6c cytochrome c oxidase, subunit VIc GBrowse link multiple interactions ISO 7 71,465,790 71,478,524 RGD:6480464 CTD
G Ctss cathepsin S GBrowse link decreases expression ISO 2 190,425,290 190,466,877 RGD:6480464 CTD
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 GBrowse link multiple interactions EXP 8 61,462,207 61,468,237 RGD:6480464 CTD
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 GBrowse link increases expression EXP 8 61,462,207 61,468,237 RGD:6480464 CTD
G Gfap glial fibrillary acidic protein GBrowse link decreases expression ISO 10 92,059,881 92,068,555 RGD:6480464 CTD
G Gja1 gap junction protein, alpha 1 GBrowse link increases expression ISO 20 35,409,815 35,422,262 RGD:6480464 CTD
G Gja1 gap junction protein, alpha 1 GBrowse link multiple interactions ISO 20 35,409,815 35,422,262 RGD:6480464 CTD
G Gna13 guanine nucleotide binding protein (G protein), alpha 13 GBrowse link multiple interactions ISO 10 98,933,205 98,965,819 RGD:6480464 CTD
G Gpx3 glutathione peroxidase 3 GBrowse link multiple interactions ISO 10 40,311,094 40,319,382 RGD:6480464 CTD
G Grn granulin GBrowse link multiple interactions ISO 10 91,536,135 91,542,239 RGD:6480464 CTD
G Hmgb1 high mobility group box 1 multiple interactions ISO RGD:6480464 CTD
G Hmox1 heme oxygenase (decycling) 1 GBrowse link multiple interactions EXP 19 13,963,139 13,969,960 RGD:6480464 CTD
G Hmox1 heme oxygenase (decycling) 1 GBrowse link increases expression EXP 19 13,963,139 13,969,960 RGD:6480464 CTD
G Hoxa7 homeobox A7 GBrowse link multiple interactions ISO 4 80,515,622 80,517,521 RGD:6480464 CTD
G Hoxa9 homeobox A9 GBrowse link multiple interactions ISO 4 80,524,246 80,526,491 RGD:6480464 CTD
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble GBrowse link multiple interactions ISO 9 63,769,401 63,790,622 RGD:6480464 CTD
G Il1b interleukin 1 beta GBrowse link decreases expression ISO 3 116,964,422 116,970,867 RGD:6480464 CTD
G Il6 interleukin 6 GBrowse link decreases expression ISO 4 456,799 461,376 RGD:6480464 CTD
G Lepr leptin receptor GBrowse link multiple interactions ISO 5 122,320,075 122,503,449 RGD:6480464 CTD
G Mt-nd6 mitochondrially encoded NADH dehydrogenase 6 GBrowse link multiple interactions ISO MT 13,543 14,061 RGD:6480464 CTD
G Ndufa1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 1 GBrowse link multiple interactions ISO X 7,726,163 7,730,110 RGD:6480464 CTD
G Ndufa5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 5 GBrowse link multiple interactions ISO 4 50,649,500 50,657,858 RGD:6480464 CTD
G Ndufc2 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 2 GBrowse link multiple interactions ISO 1 154,635,889 154,642,112 RGD:6480464 CTD
G Ndufv2 NADH dehydrogenase (ubiquinone) flavoprotein 2 GBrowse link multiple interactions ISO 9 104,852,714 104,873,325 RGD:6480464 CTD
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 GBrowse link multiple interactions EXP 3 58,366,693 58,394,116 RGD:6480464 CTD
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 GBrowse link increases expression EXP 3 58,366,693 58,394,116 RGD:6480464 CTD
G Nme2 NME/NM23 nucleoside diphosphate kinase 2 GBrowse link multiple interactions ISO 10 82,582,766 82,588,269 RGD:6480464 CTD
G Nqo1 NAD(P)H dehydrogenase, quinone 1 GBrowse link multiple interactions EXP 19 37,251,147 37,266,040 RGD:6480464 CTD
G Nqo1 NAD(P)H dehydrogenase, quinone 1 GBrowse link increases expression EXP 19 37,251,147 37,266,040 RGD:6480464 CTD
G Pah phenylalanine hydroxylase GBrowse link decreases expression ISO 7 24,175,898 24,243,592 RGD:6480464 CTD
G Por P450 (cytochrome) oxidoreductase GBrowse link increases expression EXP 12 22,078,629 22,097,301 RGD:6480464 CTD
G Por P450 (cytochrome) oxidoreductase GBrowse link decreases activity EXP 12 22,078,629 22,097,301 RGD:6480464 CTD
G Ppp1cb protein phosphatase 1, catalytic subunit, beta isozyme GBrowse link multiple interactions ISO 6 24,067,544 24,099,280 RGD:6480464 CTD
G Prdx1 peroxiredoxin 1 GBrowse link multiple interactions ISO 5 136,975,780 136,991,630 RGD:6480464 CTD
G Prdx1 peroxiredoxin 1 GBrowse link multiple interactions ISO 5 136,975,780 136,991,630 RGD:6480464 CTD
G Prdx1l1 peroxiredoxin 1-like 1 GBrowse link multiple interactions ISO 2 201,373,420 201,374,019 RGD:6480464 CTD
G Ptgs2 prostaglandin-endoperoxide synthase 2 GBrowse link decreases expression ISO 13 64,427,288 64,432,978 RGD:6480464 CTD
G Rps2 ribosomal protein S2 GBrowse link multiple interactions ISO 10 13,975,350 13,977,199 RGD:6480464 CTD
G Skap2 src kinase associated phosphoprotein 2 GBrowse link decreases expression ISO 4 80,149,846 80,300,111 RGD:6480464 CTD
G Sod1 superoxide dismutase 1, soluble GBrowse link multiple interactions ISO 11 29,810,766 29,816,342 RGD:6480464 CTD
G Spp1 secreted phosphoprotein 1 multiple interactions ISO RGD:6480464 CTD
G Tgm2 transglutaminase 2, C polypeptide GBrowse link multiple interactions ISO 3 148,832,866 148,862,385 RGD:6480464 CTD
G Tkt transketolase GBrowse link multiple interactions ISO 16 5,908,759 5,933,695 RGD:6480464 CTD
G Tnf tumor necrosis factor GBrowse link decreases expression ISO 20 3,661,000 3,663,618 RGD:6480464 CTD
G Tp53 tumor protein p53 GBrowse link multiple interactions EXP 10 56,399,721 56,411,150 RGD:6480464 CTD
G Ubb ubiquitin B GBrowse link multiple interactions ISO 10 139,578,694 139,579,068 RGD:6480464 CTD
G Uqcrb ubiquinol-cytochrome c reductase binding protein GBrowse link multiple interactions ISO 7 67,958,363 67,963,730 RGD:6480464 CTD
G Uqcrb-ps1 ubiquinol-cytochrome c reductase binding protein, pseudogene 1 GBrowse link multiple interactions ISO 1 90,807,565 90,807,900 RGD:6480464 CTD
G Uqcrc2 ubiquinol cytochrome c reductase core protein 2 GBrowse link multiple interactions ISO 1 179,459,817 179,490,381 RGD:6480464 CTD
beta-cryptoxanthin term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Acp5 acid phosphatase 5, tartrate resistant multiple interactions ISO RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link multiple interactions ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link increases metabolic processing ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Casp3 caspase 3 GBrowse link multiple interactions ISO 16 48,944,226 48,962,420 RGD:6480464 CTD
G Casp3 caspase 3 GBrowse link increases expression ISO 16 48,944,226 48,962,420 RGD:6480464 CTD
G Col1a1 collagen, type I, alpha 1 GBrowse link multiple interactions ISO 10 83,622,438 83,639,368 RGD:6480464 CTD
G Col1a1 collagen, type I, alpha 1 GBrowse link increases expression ISO 10 83,622,438 83,639,368 RGD:6480464 CTD
G Csf1 colony stimulating factor 1 (macrophage) GBrowse link multiple interactions ISO 2 203,292,765 203,307,968 RGD:6480464 CTD
G Ctsk cathepsin K GBrowse link multiple interactions ISO 2 190,394,854 190,405,668 RGD:6480464 CTD
G Nfatc1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 GBrowse link multiple interactions ISO 18 77,498,654 77,581,231 RGD:6480464 CTD
G Runx2 runt-related transcription factor 2 GBrowse link multiple interactions ISO 9 11,869,234 12,025,219 RGD:6480464 CTD
G Runx2 runt-related transcription factor 2 GBrowse link increases expression ISO 9 11,869,234 12,025,219 RGD:6480464 CTD
G Tnfsf11 tumor necrosis factor (ligand) superfamily, member 11 GBrowse link multiple interactions ISO 15 59,397,837 59,428,014 RGD:6480464 CTD
canthaxanthin term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 GBrowse link increases expression ISO 8 61,462,207 61,468,237 RGD:6480464 CTD
G Cyp1a1 cytochrome P450, family 1, subfamily a, polypeptide 1 GBrowse link increases expression EXP 8 61,462,207 61,468,237 RGD:6480464 CTD
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 GBrowse link increases expression EXP 8 61,439,062 61,447,861 RGD:6480464 CTD
G Cyp1a2 cytochrome P450, family 1, subfamily a, polypeptide 2 GBrowse link increases expression ISO 8 61,439,062 61,447,861 RGD:6480464 CTD
zeaxanthin term browser
Symbol Object Name GBrowse Qualifiers Evidence Chr Start Stop Reference Source
G Bco2 beta-carotene oxygenase 2 GBrowse link multiple interactions ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link affects metabolic processing ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link increases metabolic processing ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Bco2 beta-carotene oxygenase 2 GBrowse link increases expression ISO 8 53,892,017 53,917,522 RGD:6480464 CTD
G Gstp1 glutathione S-transferase pi 1 GBrowse link affects binding ISO 1 206,627,398 206,629,866 RGD:6480464 CTD
G Gstp1 glutathione S-transferase pi 1 GBrowse link affects binding ISO 1 206,627,398 206,629,866 RGD:6480464 CTD
G Hif1a hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) GBrowse link multiple interactions ISO 6 96,419,024 96,463,891 RGD:6480464 CTD
G Mapk1 mitogen activated protein kinase 1 GBrowse link multiple interactions ISO 11 85,968,732 86,030,387 RGD:6480464 CTD
G Mapk3 mitogen activated protein kinase 3 GBrowse link multiple interactions ISO 1 185,935,044 185,941,245 RGD:6480464 CTD
Term paths to the root
Path 1
Term Annotations click to browse term
  CHEBI ontology 492574
    role 482262
      chemical role 208077
        antioxidant 26099
          beta-carotene 209
            astacene 0
            astaxanthin 58
            beta-cryptoxanthin 13
            canthaxanthin 4
            echinenone 0
            zeaxanthin + 9
Path 2
Term Annotations click to browse term
  CHEBI ontology 492574
    subatomic particle 491537
      composite particle 491537
        hadron 491537
          baryon 491537
            nucleon 491537
              atomic nucleus 491537
                atom 491537
                  main group element atom 461203
                    main group molecular entity 456122
                      s-block molecular entity 310368
                        hydrogen molecular entity 307614
                          hydrides 192538
                            organic hydride 118097
                              organic fundamental parent 118097
                                hydrocarbon 70705
                                  terpene 15662
                                    tetraterpene 479
                                      carotene 479
                                        cyclic carotene 225
                                          beta-carotene 209
                                            astacene 0
                                            astaxanthin 58
                                            beta-cryptoxanthin 13
                                            canthaxanthin 4
                                            echinenone 0
                                            zeaxanthin + 9
paths to the root

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