Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 82,235 (bp)   Positions: 130
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SR/JrHsd (MCW) 
.007
.002
.003
.042
.005
.021
.006
.628
.702
.076
.04
.187
.859
.009
.097
.258
.066
--
--
--
.895
.872
.011
.0
.0
.0
.001
.0
.063
.84
.065
.001
.0
.003
--
.001
.005
.0
.0
.026
.037
.002
.108
.02
.039
.275
--
--
.994
.757
.781
.062
--
.009
.006
.001
.018
.014
.364
.016
.016
.002
.0
.132
.0
.074
.967
.001
.001
.265
.018
.08
--
--
--
.013
.023
.164
.124
.072
.008
.003
.0
.002
.034
--
.0
.003
.002
.0
.007
.0
.001
.046
.145
.035
.019
.008
.001
.015
--
.004
.0
.0
.986
.012
.005
.005
.002
.001
.001
.902
.0
.0
.003
.0
.0
.151
.057
.009
.021
.018
.01
.002
.174
.102
.0
.0
.063
.008
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
Slco2a1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
G
A
A
C
A
4
G
4
G
2
G
G
2
G
G
G
C
8
3
T
G
A
G
T
A
A
T
A
T
A
C
T
A
T
G
T
A
T
C
G
G
T
T
C
G
C
T
C
2
G
2
C
C
C
A
G
A
C
C
C
G
A
C
T
T
A
T
4
T
T
G
C
A
T
T
4
2
T
C
A
A
G
C
G
G
C
T
T
G
C
G
T
C
C
T
C
C
A
2
G
A
C
A
G
C
T
G
A
A
A
C
T
A
G
T
T
A
A
G
A
T
3
6
15
T
T
C
T
  110,892,453
  110,893,223
  110,893,688
  110,893,734
  110,894,066
  110,894,613
  110,895,037
  110,895,318
  110,895,323
  110,895,481
  110,899,492
  110,899,624
  110,900,798
  110,903,125
  110,907,110
  110,907,146
  110,909,281
  110,911,194
  110,911,535
  110,911,564
  110,914,157
  110,914,161
  110,915,351
  110,915,480
  110,915,642
  110,915,688
  110,917,628
  110,918,424
  110,918,567
  110,919,563
  110,919,602
  110,919,853
  110,920,887
  110,921,009
  110,921,682
  110,922,476
  110,923,316
  110,923,837
  110,925,014
  110,925,210
  110,925,562
  110,926,126
  110,926,283
  110,926,704
  110,926,810
  110,927,450
  110,928,376
  110,928,529
  110,929,053
  110,929,846
  110,929,847
  110,930,858
  110,932,182
  110,932,353
  110,933,130
  110,933,213
  110,934,174
  110,934,184
  110,934,860
  110,936,476
  110,936,591
  110,937,397
  110,937,821
  110,941,516
  110,942,047
  110,942,063
  110,942,487
  110,942,697
  110,943,141
  110,943,417
  110,943,542
  110,943,598
  110,944,487
  110,944,508
  110,944,526
  110,944,702
  110,944,879
  110,945,758
  110,945,760
  110,945,762
  110,946,217
  110,946,656
  110,946,960
  110,947,268
  110,947,505
  110,947,616
  110,948,004
  110,948,111
  110,948,830
  110,949,568
  110,949,709
  110,950,438
  110,950,566
  110,950,624
  110,950,656
  110,950,820
  110,950,863
  110,951,043
  110,951,313
  110,951,525
  110,953,053
  110,953,123
  110,953,714
  110,953,760
  110,955,173
  110,955,616
  110,955,875
  110,956,223
  110,956,632
  110,957,040
  110,957,763
  110,957,977
  110,958,811
  110,958,853
  110,959,262
  110,959,568
  110,960,332
  110,960,986
  110,961,033
  110,961,362
  110,961,484
  110,961,539
  110,963,099
  110,966,789
  110,966,815
  110,966,828
  110,967,039
  110,967,559
  110,968,345
  110,968,486
G/3
C
A
G
2
T
A/G
-
G/C
-
A
-
2
G/A
-
5
A
A
4
-
3/-
T/-
2
G
A
2
A/3
G
5
G
T/C
3
T
C
-
2
A
C
G
T/-
C/A
A
A
A
C
A
G/A
C/T
C
C/7
-
A
-
T
T
T
G
A
G
A
A
T
A
G
T
A
C
G
C
-
C
C
A
C/T
A/-
C
C
4/-
2/-
C
T
G
A/C
A
T
A
A
T
-
G
A
T
A
-
7
T
C
2
T
G
-
T
G
T
G
C
T
C
C
2
2
G
T
C
G
A
C
G
A/G
G
A
G
C
-
-
15/-
C
C
T
T/G