Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 1,191,090 (bp)   Positions: 124
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
ZFDM (KyushuU) 
.454
.978
1.0
1.0
.37
.327
.204
.196
.036
.563
1.0
.993
.979
.596
.18
.456
.906
1.0
1.0
.544
.318
.586
.708
.98
1.0
.958
.79
.002
.0
.641
.612
.949
.974
.254
.118
.998
.998
.702
.496
.006
.01
.365
.245
.666
.44
.952
.0
.021
.007
.049
1.0
.775
.069
.037
.284
.744
.189
.0
.005
.557
.636
.963
.897
.847
.003
.033
.871
.44
.584
.114
.993
1.0
.996
1.0
.979
.994
.998
1.0
1.0
.977
.978
.0
.002
.002
.94
1.0
.0
.991
.281
.007
.992
.547
.982
.988
.204
.767
.0
.579
.38
.481
1.0
.006
.663
.995
.997
.987
.376
.406
.547
.325
.971
.76
.128
.053
.912
.0
.012
.998
.001
.922
.996
.0
.0
.284
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
Prkn
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
A
G
T
T
C
C
G
T
T
C
G
C
A
C
C
C
C
C
A
A
A
G
C
C
A
A
C
A
C
A
G
A
G
C
T
G
G
T
G
G
T
A
T
G
C
T
A
A
T
C
T
G
G
G
A
A
G
G
T
T
T
T
A
T
A
T
A
T
A
T
C
G
C
A
T
G
C
A
C
A
A
G
G
C
T
T
C
G
T
T
G
C
G
A
C
A
C
G
2
C
G
T
T
T
C
C
A
G
T
G
T
G
T
T
T
A
T
T
C
C
T
A
C
  49,694,956
  49,694,987
  49,697,552
  49,697,713
  49,702,442
  49,702,443
  49,702,444
  49,702,860
  49,707,918
  49,708,063
  49,719,047
  49,719,173
  49,720,565
  49,730,434
  49,741,623
  49,741,629
  49,741,720
  49,741,872
  49,742,005
  49,742,087
  49,746,499
  49,746,653
  49,756,332
  49,775,428
  49,775,458
  49,779,764
  49,843,965
  49,886,853
  49,910,694
  49,910,826
  49,910,828
  49,929,464
  49,961,254
  49,967,303
  49,967,305
  49,977,024
  49,977,026
  49,980,461
  49,987,226
  50,011,929
  50,070,255
  50,070,347
  50,109,461
  50,109,538
  50,109,564
  50,131,721
  50,133,588
  50,133,595
  50,142,849
  50,142,858
  50,143,238
  50,143,249
  50,145,534
  50,145,538
  50,216,011
  50,231,647
  50,242,214
  50,266,733
  50,285,319
  50,285,472
  50,285,534
  50,285,645
  50,290,781
  50,290,804
  50,290,948
  50,294,241
  50,353,847
  50,367,926
  50,368,059
  50,371,312
  50,371,340
  50,371,381
  50,371,447
  50,371,544
  50,371,648
  50,371,655
  50,371,657
  50,371,692
  50,371,697
  50,371,762
  50,371,763
  50,431,884
  50,433,705
  50,438,424
  50,438,567
  50,438,577
  50,472,782
  50,476,522
  50,489,687
  50,497,980
  50,530,037
  50,544,826
  50,558,199
  50,558,337
  50,560,632
  50,591,155
  50,595,959
  50,595,996
  50,598,075
  50,603,994
  50,612,055
  50,674,168
  50,695,206
  50,703,441
  50,703,505
  50,703,512
  50,703,537
  50,703,538
  50,703,541
  50,713,174
  50,713,197
  50,713,217
  50,713,278
  50,713,287
  50,718,810
  50,729,070
  50,730,728
  50,746,469
  50,746,529
  50,788,179
  50,809,746
  50,840,905
  50,862,425
  50,862,457
G/A
A/G
G/-
T/C
T/13
C/G
C/A
G/A
T/2
T/-
C/2
G/A
C/2
A/C
C/T
C/A
C/T
C/T
C/T
A/T
A/T
A/C
G/A
C/T
C/T
A/G
A/G
C/T
A/G
C/-
A/G
G/A
A/T
G/T
C/T
T/A
G/T
G/A
T/-
G/A
G/A
T/C
A/-
T/C
G/A
C/A
T/C
A/C
A/G
T/C
C/T
T/C
G/4
G/A
G/3
A/2
A/C
G/A
G/A
T/C
T/C
T/G
T/C
A/2
TC/C
A/T
T/G
A/G
T/C
A/T
T/C
C/T
G/C
C/T
A/G
T/C
G/T
C/T
A/G
C/T
A/G
A/G
G/A
G/A
C/T
T/C
T/C
C/T
G/A
T/C
T/C
G/2
C/G
G/T
A/G
C/T
A/G
C/T
G/A
2/-
C/T
G/A
T/C
T/C
T/A
C/T
C/T
A/G
G/A
T/A
G/A
T/A
G/C
T/C
T/C
T/C
A/-
T/C
T/C
C/T
C/T
T/C
A/C
C/T