Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 217,848 (bp)   Positions: 115
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
WN/N (KNAW) 
.0
.001
.022
.001
.001
.016
.029
.085
.017
.006
.002
.008
.369
.003
.188
--
.0
.001
.168
.028
.003
.424
.298
.003
.011
.044
.495
.05
.063
--
--
--
--
--
--
--
.0
.717
--
--
.261
.032
.077
.004
--
--
.567
.1
--
.235
.367
.25
.035
--
--
--
.55
.035
--
.001
--
.036
.062
.0
.045
.911
1.0
.001
.001
--
.017
.222
.006
.011
.002
.236
.006
.001
.015
.002
.002
.0
.651
.001
.285
.002
.567
--
--
--
--
--
--
.115
.001
.005
.011
.033
.001
--
.002
--
--
--
.457
.002
--
.086
.925
.232
.131
.222
.121
.056
.001
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
Prkdc
T
T
A
T
C
T
T
C
C
T
A
A
T
T
T
2
G
T
A
4
C
G
C
C
C
A
T
G
2
A
C
G
C
A
A
A
T
T
A
C
A
G
G
T
4
C
T
G
T
G
G
C
A
C
G
G
A
C
T
C
17
G
24
A
T
C
A
G
T
G
A
C
T
C
T
C
A
A
G
G
C
G
C
C
T
C
A
T
C
T
A
G
G
A
A
T
C
C
A
G
3
A
G
A
T
C
T
T
T
G
G
G
C
C
A
  92,349,572
  92,349,650
  92,349,923
  92,349,993
  92,350,046
  92,350,175
  92,350,222
  92,350,471
  92,351,043
  92,353,486
  92,353,947
  92,354,349
  92,355,709
  92,356,607
  92,357,312
  92,357,493
  92,358,146
  92,358,542
  92,358,823
  92,358,887
  92,359,458
  92,362,618
  92,363,100
  92,363,154
  92,363,171
  92,363,469
  92,364,835
  92,366,591
  92,370,360
  92,371,336
  92,371,827
  92,371,992
  92,372,179
  92,372,433
  92,373,801
  92,378,654
  92,383,086
  92,385,693
  92,387,491
  92,390,499
  92,391,031
  92,391,954
  92,392,446
  92,396,811
  92,397,472
  92,397,479
  92,397,749
  92,409,421
  92,413,313
  92,413,936
  92,413,968
  92,413,969
  92,414,313
  92,419,518
  92,419,832
  92,420,033
  92,422,720
  92,425,691
  92,429,738
  92,433,618
  92,434,054
  92,434,370
  92,442,174
  92,447,084
  92,449,248
  92,449,831
  92,449,901
  92,450,441
  92,451,088
  92,451,612
  92,451,759
  92,452,113
  92,459,465
  92,459,937
  92,460,087
  92,463,562
  92,464,526
  92,464,851
  92,466,024
  92,466,270
  92,466,625
  92,466,757
  92,467,176
  92,469,247
  92,476,552
  92,476,997
  92,477,753
  92,478,228
  92,479,532
  92,479,575
  92,479,648
  92,487,245
  92,487,297
  92,487,898
  92,488,445
  92,490,985
  92,491,435
  92,492,625
  92,492,949
  92,493,251
  92,501,495
  92,504,530
  92,505,810
  92,507,544
  92,512,736
  92,513,994
  92,524,014
  92,539,282
  92,539,723
  92,540,588
  92,541,988
  92,544,575
  92,545,130
  92,556,353
  92,559,732
G
C
3
A
T
G
T/C
T
A
C
2
G
C
C
C
-
T
C
T
-
T
A
G
A
A
C
G
A
-
G
T
A
C/T
G
G
-
C
C
G
-
C
A
2
T/C
-
C/G
5
-
A
A
5
7
-
G
A
G/A
-
G
C
T
17/-
A
-
G
A
T
G
T
T/3
2
G
T
T/C
G
G
A
G
C
A
A
T
T
T
T
G
T
G
A
T
G
G
A
A
G
A/G
C
A
T
T
A
3/-
A/G
A
G
C
C/T
2
A
C
C
G/T
A
C/-
C/G
-