Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 37,361 (bp)   Positions: 161
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
FHH/EurMcwi (MCW) 
1.0
.0
.001
.19
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
.001
.063
.013
.048
.059
.084
.054
.061
.013
.534
.025
.329
.649
.696
.018
.027
.326
.398
.586
.463
.361
.341
.19
.007
.628
.006
.002
.014
.027
.074
.061
--
--
--
--
--
--
--
.514
.819
.011
.001
.0
.009
.013
.001
.001
.004
.001
.0
.003
.005
.002
.007
.022
.007
.253
.027
.068
.007
.014
.114
.137
.002
.001
.006
.819
.028
.059
.057
.052
.022
.005
.005
.046
.001
.0
.001
.006
.044
.004
.0
--
--
.002
.005
.001
.0
.003
1.0
1.0
.0
.206
.0
.223
.055
.002
.299
.0
.014
.014
.005
.046
.974
.08
.012
.001
.005
.924
.007
.226
.234
.295
.018
--
--
.203
.084
.079
--
.032
.481
.009
.074
.377
.529
.02
.012
.003
.04
.127
.267
.404
.016
.0
.002
--
--
.181
.082
.002
.015
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
Kcnmb2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
C
T
G
2
C
C
G
G
A
G
A
2
4
A
C
2
G
C
G
G
A
A
T
C
C
3
3
T
A
C
G
G
T
C
G
3
T
C
2
T
T
C
G
G
A
C
C
A
C
G
G
A
C
5
C
G
G
T
T
A
A
T
C
A
C
T
C
C
G
C
C
G
2
A
A
T
T
A
C
C
T
C
C
C
G
A
C
T
6
3
3
2
T
T
A
G
T
G
G
G
T
2
T
2
A
T
2
2
G
A
T
A
G
T
C
G
G
C
C
A
G
G
A
G
G
A
A
C
G
G
A
C
T
A
T
G
A
T
T
T
T
T
C
C
G
A
A
A
G
G
G
C
G
T
G
G
A
A
G
G
G
  138,219,060
  138,219,756
  138,220,071
  138,220,148
  138,220,268
  138,220,294
  138,220,316
  138,220,352
  138,220,356
  138,220,362
  138,220,383
  138,220,396
  138,220,430
  138,220,519
  138,220,616
  138,220,674
  138,220,717
  138,220,755
  138,220,759
  138,222,494
  138,222,542
  138,222,829
  138,222,903
  138,223,114
  138,223,138
  138,223,154
  138,223,159
  138,223,244
  138,224,028
  138,224,239
  138,224,285
  138,224,403
  138,224,422
  138,224,470
  138,224,505
  138,224,592
  138,224,598
  138,224,625
  138,224,631
  138,224,634
  138,224,636
  138,224,648
  138,224,721
  138,225,026
  138,225,503
  138,225,510
  138,225,538
  138,225,627
  138,225,881
  138,226,773
  138,227,057
  138,227,088
  138,227,201
  138,227,203
  138,227,409
  138,227,543
  138,227,627
  138,227,726
  138,227,843
  138,227,939
  138,227,961
  138,228,163
  138,228,177
  138,228,178
  138,228,198
  138,228,203
  138,228,293
  138,228,300
  138,228,349
  138,228,556
  138,228,614
  138,228,785
  138,229,076
  138,229,120
  138,229,232
  138,229,688
  138,230,288
  138,230,313
  138,230,562
  138,230,674
  138,231,058
  138,231,062
  138,231,237
  138,231,501
  138,231,559
  138,231,734
  138,231,851
  138,232,138
  138,232,143
  138,232,146
  138,232,162
  138,232,176
  138,232,177
  138,232,188
  138,232,442
  138,232,503
  138,232,605
  138,233,109
  138,233,292
  138,233,509
  138,233,514
  138,233,911
  138,233,944
  138,233,956
  138,233,957
  138,233,976
  138,233,990
  138,234,002
  138,234,297
  138,234,343
  138,234,429
  138,234,704
  138,235,513
  138,235,690
  138,235,730
  138,235,926
  138,236,022
  138,236,556
  138,236,614
  138,236,679
  138,236,713
  138,236,765
  138,237,107
  138,237,306
  138,237,376
  138,237,392
  138,237,397
  138,237,642
  138,237,752
  138,237,801
  138,237,840
  138,238,033
  138,238,938
  138,239,160
  138,239,698
  138,240,374
  138,241,401
  138,241,832
  138,242,120
  138,242,513
  138,242,531
  138,242,838
  138,243,005
  138,243,223
  138,243,307
  138,244,045
  138,245,175
  138,245,264
  138,245,312
  138,245,327
  138,245,431
  138,246,881
  138,246,932
  138,247,045
  138,247,482
  138,247,582
  138,248,130
  138,250,000
  138,250,039
  138,254,256
  138,254,580
T
C
A
-
3
3
C
G/C
C
-
C
2/-
-
G
T
2/-
3/3
C/G
G/C
C
G
G
C
T
A
3/-
3/-
C
G
T
A
A
C
T
A
-
5/-
C/-
2/-
T/-
T/C
5
A
A
G
T
T
G
T
A
A
G
-
-
T
A
-
A
5/-
G
G
A
T
G
T
C
A
T
A
T
T
4
-
A/T
G
C
A
G
T
A
C
T
T
T
A
G
A
C
-
-
-
2/-
2
A
T
C
C
A
T
C
C
2/-
T/3
2/-
A/3
T/C
2/-
2/-
A
G
-
T
A
C
T
T
A
T
T
G
A
A
G
A
A
C
G
9
A
G/3
G
T
C
G
C
A
G
C
T/-
C
C
C
T
2
A
G
G
G
G/-
-
A
A
A
T/G
A
A
-
2
A
T
G/A