Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 129,083 (bp)   Positions: 94
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SS/JrHsdMcwi (MCW) 
.006
.006
.008
.002
.034
.014
.016
.064
.001
.297
.0
.303
.797
.004
.969
.001
.005
.398
.024
.037
.004
.016
.027
.868
--
--
.962
.086
.01
.043
--
.054
.037
.017
.523
.035
.063
.091
.1
.033
.144
.154
.015
.507
.063
.009
--
.046
.073
.048
.0
.026
--
--
--
--
--
--
--
--
.001
.0
.0
.002
.126
.1
.008
.165
.018
.048
.025
.231
.183
.002
.002
.013
.013
.045
.002
.183
.013
.009
.044
.003
.002
.006
.003
.041
.135
.003
.121
.155
.159
.113
Gng12
Gng12
Gng12
Gng12
Gng12
Gng12
Gng12
Gng12
Gng12
Gng12
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
A
C
T
2
8
A
T
G
C
T
T
A
C
A
G
G
T
A
T
A
T
G
C
A
14
2
C
A
T
T
G
A
G
2
G
T
A
G
T
2
A
C
G
G
C
G
G
T
T
C
C
G
C
C
G
2
T
C
G
T
C
C
A
G
A
T
G
A
A
G
G
A
A
A
G
A
G
G
C
G
T
T
A
G
A
C
A
3
A
T
A
G
A
T
  162,434,638
  162,436,660
  162,436,661
  162,436,664
  162,448,009
  162,453,950
  162,454,110
  162,454,207
  162,454,414
  162,456,646
  162,457,743
  162,457,957
  162,458,060
  162,458,948
  162,459,324
  162,461,092
  162,461,228
  162,464,170
  162,464,470
  162,464,875
  162,465,224
  162,466,620
  162,467,553
  162,468,299
  162,469,554
  162,469,566
  162,472,118
  162,473,225
  162,473,260
  162,473,432
  162,474,496
  162,475,056
  162,476,432
  162,476,456
  162,477,635
  162,478,424
  162,479,242
  162,479,862
  162,482,553
  162,483,108
  162,483,639
  162,483,652
  162,483,893
  162,484,383
  162,487,092
  162,487,398
  162,487,727
  162,488,092
  162,488,569
  162,489,630
  162,492,875
  162,492,969
  162,493,135
  162,493,139
  162,493,150
  162,493,176
  162,493,266
  162,493,596
  162,493,655
  162,493,660
  162,494,118
  162,494,603
  162,495,919
  162,496,755
  162,497,888
  162,497,890
  162,498,972
  162,499,916
  162,500,358
  162,501,758
  162,504,185
  162,504,522
  162,504,763
  162,507,031
  162,508,747
  162,509,270
  162,509,946
  162,534,241
  162,534,589
  162,534,912
  162,535,006
  162,535,221
  162,535,716
  162,536,037
  162,536,907
  162,539,838
  162,544,391
  162,544,835
  162,546,429
  162,548,497
  162,548,516
  162,548,530
  162,548,540
  162,548,561
3
3
T/-
2/-
8/-
G
C
C
T
C
C
G
T
G
A
A
-
G
G
T
C
T
T
3
-
-
T
G
C
4
T
G
A
-
A
A
G
A
C
-
G
T
A
A
3
A
2
G
C
G
G
4
C/3
C/2
G/A
2/-
T/G
C/T
G/A
T/G
2
T
G
A
24
T/C
A
2
G
A
A
G
-
C
A
G
A
T
T
A
G
C
16
A
T
T
G
-
2
3
5/3
G/A
A/G
C