Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 2,224,084 (bp)   Positions: 158
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
GK/Ox (KNAW) 
.003
.036
.004
.235
.321
.412
.373
.357
.283
.005
.001
.059
.061
.103
--
--
--
--
--
.998
.947
.095
.162
.078
.682
.011
.0
--
.01
--
--
--
.843
.135
--
--
.127
.133
.431
.005
.009
.002
.998
.999
.004
--
--
--
--
--
.004
.001
.028
--
.0
.135
.0
--
.002
--
.0
--
--
--
.002
--
.006
.236
.236
--
--
--
--
--
.94
.636
.031
--
--
--
--
--
--
.032
.978
--
.001
--
--
--
--
.099
.023
.027
--
.005
--
--
--
--
--
.588
--
--
.009
.125
--
.289
.052
--
.006
--
.001
.001
.084
.09
.008
.789
.013
.32
--
--
--
.028
--
--
.092
--
--
.143
.001
.004
.003
.008
.002
--
.01
.001
.003
--
.528
.017
.001
.005
.072
.115
.0
.006
.116
.192
--
--
.029
.021
.001
.002
.001
.001
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
Dmd
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
6
2
T
A
T
A
T
A
T
C
G
4
A
T
C
T
C
34
C
2
2
2
C
2
4
C
T
A
A
2
2
G
2
A
A
4
2
T
2
T
T
C
2
C
T
C
4
G
G
2
C
A
A
T
2
4
C
C
C
C
T
2
3
A
T
T
G
2
A
C
A
6
C
2
G
G
3
6
T
10
4
G
2
2
2
G
C
G
T
C
A
G
T
C
T
A
8
T
G
G
2
C
A
C
2
G
T
G
T
C
C
C
T
G
G
2
2
A
T
A
C
A
2
6
3
T
C
2
2
A
G
T
3
T
A
T
A
A
C
2
2
C
3
C
2
T
T
C
A
G
G
T
2
C
2
4
2
  51,499,990
  51,504,550
  51,504,559
  51,504,567
  51,504,570
  51,504,575
  51,504,577
  51,504,578
  51,504,582
  51,514,626
  51,525,175
  51,526,617
  51,550,814
  51,551,328
  51,553,552
  51,559,696
  51,566,024
  51,596,330
  51,602,746
  51,626,595
  51,626,632
  51,628,456
  51,656,274
  51,675,677
  51,701,601
  51,709,020
  51,748,910
  51,751,103
  51,775,279
  51,780,594
  51,780,595
  51,781,003
  51,819,570
  51,849,873
  51,866,049
  51,866,050
  51,881,783
  52,013,283
  52,025,298
  52,030,298
  52,045,122
  52,061,496
  52,064,698
  52,064,699
  52,065,060
  52,076,139
  52,109,332
  52,139,692
  52,139,885
  52,141,798
  52,144,066
  52,154,422
  52,154,690
  52,165,020
  52,167,744
  52,193,569
  52,199,884
  52,254,546
  52,330,166
  52,338,342
  52,340,732
  52,373,129
  52,406,424
  52,423,508
  52,430,777
  52,468,272
  52,473,620
  52,482,415
  52,482,416
  52,491,720
  52,491,753
  52,500,330
  52,500,332
  52,503,697
  52,528,464
  52,528,532
  52,565,334
  52,565,379
  52,565,385
  52,565,392
  52,565,396
  52,565,407
  52,584,756
  52,587,705
  52,587,854
  52,639,594
  52,659,110
  52,669,858
  52,784,921
  52,828,124
  52,840,474
  52,866,603
  52,877,723
  52,877,725
  52,924,953
  52,941,898
  52,944,402
  52,949,275
  52,955,146
  52,955,149
  52,955,972
  52,995,079
  53,026,144
  53,030,330
  53,037,325
  53,047,449
  53,101,172
  53,148,368
  53,148,371
  53,167,719
  53,207,000
  53,209,174
  53,222,433
  53,231,002
  53,231,019
  53,231,020
  53,232,887
  53,237,590
  53,244,420
  53,248,564
  53,253,786
  53,253,846
  53,273,808
  53,288,172
  53,297,407
  53,297,410
  53,318,858
  53,326,372
  53,326,374
  53,328,409
  53,335,513
  53,339,128
  53,369,481
  53,370,073
  53,370,075
  53,420,047
  53,461,778
  53,494,780
  53,495,194
  53,511,412
  53,512,250
  53,532,585
  53,558,953
  53,560,178
  53,560,228
  53,579,117
  53,606,438
  53,608,558
  53,627,568
  53,628,205
  53,630,246
  53,630,266
  53,642,083
  53,647,278
  53,683,315
  53,683,316
  53,684,410
  53,684,412
G/2
6/-
2/-
T/2
A/-
T/2
A/3
T/2
A/3
T/-
C/-
G/2
-
A/G
T/-
T
T/-
C/-
-
C/5
2/-
2/-
-
C/3
2/-
4/-
C/-
C
C
A/7
2/-
2/-
15/3
2/-
G
C
4/-
2/-
A
-
21
T/3
C/9
2/-
2
T/C
C/2
4/-
G/-
G/2
2/-
C/7
A/-
A/2
G
2/-
4/-
C/-
C/2
C/6
C/2
T/2
2/-
-
A/3
26
T/-
G/3
2/-
A/C
C/G
-
-
2
2/-
5
T
3/-
6/-
C
-
-
-
2/-
2/-
-
G/A
-
G/2
T/-
5
T
7
-
C/2
4
A/-
8/-
T/-
G/5
2
2/-
2
-
C/5
2/-
A
A
A
T/-
C/2
C/2
C/2
3
4
2
-
2/-
A/2
5
A/2
C/6
2
2/-
6/-
3/-
5
3
-
2/-
A/3
G/3
T/-
3/-
T/-
A/-
T/13
C
6
-
2/-
2/-
2
-
2
-
11
-
C/3
A/-
T
T
2
2/-
C/2
2/-
4/-
2/-