Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly Rnor_5.0
   

Chromosome Start Position Stop Position
Region Size: 856,395 (bp)   Positions: 90
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
BDIX.Cg-Tal/NemOda (KyushuU) 
1.0
.0
.983
.017
1.0
1.0
.005
.206
.998
.0
.759
.166
.0
1.0
.847
.011
.763
.714
.94
.234
.985
.033
.997
.218
.888
.034
.016
1.0
.97
.983
.58
.102
.002
.995
.001
.007
.618
.001
.165
.95
.97
.77
.021
.0
.0
.0
.084
.948
.423
.985
.146
.991
.998
.958
.861
.981
.0
.967
.36
.63
.996
.977
.973
.958
.893
.91
.976
.997
.065
.986
.986
1.0
.633
.085
.843
.029
.997
.99
.006
1.0
.01
.995
.004
.03
.99
.992
.0
.0
.096
.767
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Adgrl3
Adgrl3
Adgrl3
Adgrl3
Adgrl3
Adgrl3
Adgrl3
Adgrl3
Adgrl3
T
T
A
T
G
C
G
G
A
T
T
T
T
T
A
T
T
C
G
G
A
T
G
G
T
A
G
G
A
A
A
G
T
T
C
G
T
C
T
T
A
C
A
T
C
C
G
G
A
G
T
T
A
G
A
T
G
C
A
T
G
A
C
T
A
A
G
C
G
T
C
T
A
T
C
A
A
G
T
A
T
T
A
T
A
T
6
T
C
A
  28,222,569
  28,307,665
  28,307,703
  28,334,101
  28,334,247
  28,334,524
  28,342,440
  28,342,449
  28,342,717
  28,342,816
  28,342,911
  28,343,210
  28,344,454
  28,344,493
  28,354,028
  28,360,333
  28,422,677
  28,422,734
  28,424,335
  28,431,514
  28,440,418
  28,440,493
  28,446,491
  28,446,498
  28,463,511
  28,469,538
  28,474,442
  28,480,049
  28,485,211
  28,490,977
  28,499,906
  28,550,069
  28,575,445
  28,575,486
  28,592,627
  28,592,728
  28,592,750
  28,613,689
  28,634,899
  28,652,285
  28,671,195
  28,671,362
  28,678,750
  28,681,087
  28,681,090
  28,681,096
  28,681,107
  28,681,281
  28,681,353
  28,683,512
  28,731,270
  28,732,125
  28,745,206
  28,762,242
  28,771,140
  28,775,843
  28,795,084
  28,805,037
  28,815,350
  28,826,439
  28,826,481
  28,826,516
  28,826,523
  28,826,531
  28,826,586
  28,828,407
  28,844,318
  28,844,402
  28,845,342
  28,852,707
  28,854,792
  28,854,836
  28,975,391
  28,984,523
  28,984,536
  28,988,197
  28,988,435
  28,988,578
  28,989,055
  28,993,546
  28,993,790
  28,998,862
  28,998,985
  29,001,029
  29,018,304
  29,019,111
  29,029,436
  29,033,359
  29,036,972
  29,037,104
T/C
T/C
A/C
T/C
G/A
C/T
G/A
G/A
A/G
T/C
T/C
T/C
T/A
T/C
A/G
T/2
T/A
C/T
G/2
G/A
A/C
T/G
G/A
G/A
T/G
A/C
G/T
G/-
A/G
A/C
A/G
G/C
T/C
T/C
C/T
G/A
T/5
C/T
T/C
T/A
A/G
C/3
A/G
T/C
C/T
C/T
G/A
G/C
A/G
G/A
T/A
T/A
A/5
G/A
A/T
T/4
G/A
C/T
A/G
T/C
G/A
A/G
C/T
T/A
A/G
A/C
G/A
C/G
G/A
T/C
C/T
T/2
A/G
T/C
C/T
A/T
A/G
G/A
T/-
A/T
T/C
T/A
A/G
T/C
A/G
T/C
6/-
T/C
C/T
A/G