Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 36,866 (bp)   Positions: 58
Conservation 
Genes ( + ) 
Genes ( - ) 
RGSC 3.4  
WAG/Rij (ICL) 
.0
.006
.004
.28
.273
.027
.181
.071
.001
.0
.635
.014
.001
.029
--
.001
.0
.0
.0
.0
.0
.0
.007
.254
.352
.009
.511
.005
.02
.001
.002
.082
--
.029
.011
.79
.0
.004
1.0
.005
.855
.004
.023
.119
.178
.017
.033
.006
.058
.003
.009
.073
.019
--
1.0
.998
.003
.999
Vps35
Vps35
Vps35
Vps35
Vps35
Vps35
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
A
C
G
A
A
A
C
G
T
C
G
C
A
G
A
G
T
T
T
T
T
C
G
C
T
A
A
C
T
C
T
A
A
A
G
T
A
A
G
A
G
T
T
G
C
C
T
C
G
T
T
A
T
T
A
T
A
  23,125,315
  23,126,003
  23,126,709
  23,127,227
  23,127,228
  23,127,351
  23,127,439
  23,127,753
  23,128,225
  23,128,889
  23,129,713
  23,130,328
  23,130,822
  23,131,264
  23,131,597
  23,132,088
  23,132,611
  23,132,612
  23,132,968
  23,132,969
  23,133,218
  23,133,219
  23,133,283
  23,134,273
  23,134,322
  23,135,056
  23,137,512
  23,137,839
  23,140,093
  23,140,215
  23,140,975
  23,141,507
  23,142,052
  23,143,193
  23,145,375
  23,146,446
  23,146,540
  23,146,991
  23,149,244
  23,149,798
  23,150,029
  23,151,695
  23,152,620
  23,152,645
  23,152,824
  23,153,899
  23,154,610
  23,154,901
  23,155,035
  23,155,308
  23,155,589
  23,155,869
  23,156,244
  23,156,888
  23,157,844
  23,158,735
  23,161,169
  23,161,359
C
G
T
A
G
G
T
A
A
C
T
A
T
G
A
G
C
C
C
C
A
A
T
A
T
C
G
T
A
C
T
C
G
G
G
A
C
G
T
T
G
A
G
C
A
T
T
C
T
A
C
C
T
C
C
G
C
G