Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 47,608 (bp)   Positions: 138
Conservation 
Genes ( + ) 
Genes ( - ) 
Genes ( - ) 
Rnor 5.0  
SBN/Ygl (KNAW) 
.007
.405
--
--
.037
.001
.003
.001
.0
.006
.019
.014
.006
--
.004
.041
--
.002
.0
.011
.001
.001
.001
.99
.961
.988
.994
--
--
.129
.202
.048
.027
.031
.001
.001
.01
.997
--
.02
.016
.017
.088
.001
.0
.002
.0
.105
.016
.011
.024
.001
.121
--
.004
.01
.011
.001
.0
.352
.0
.001
.0
.0
.011
.042
.001
.003
.001
.009
.001
.07
.0
.002
.006
.068
.001
.011
.002
.0
.0
.779
.003
.001
.001
.063
.001
.041
--
.011
.101
.001
.216
.001
--
.034
.016
.044
.104
.05
--
--
--
--
.029
.003
.0
.001
.305
.104
.065
.164
.03
.062
.023
.002
.002
.136
.012
.692
.102
.021
.077
.079
.012
.094
.025
.014
.067
.03
.079
.069
.05
.0
.003
.023
.015
.071
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
A
C
C
T
T
T
C
A
T
G
A
A
T
C
99
A
A
T
G
G
G
G
A
A
4
G
T
A
G
C
A
T
T
A
A
A
C
2
G
A
2
13
A
A
T
C
G
T
G
G
C
10
T
2
4
2
A
A
A
T
2
T
C
A
C
A
G
T
A
T
G
C
A
C
G
3
G
T
A
A
G
A
C
T
A
C
6
6
2
T
A
T
T
T
T
C
G
G
A
G
G
G
A
A
T
A
T
G
C
T
T
3
C
C
T
13
G
T
C
T
A
G
2
T
T
G
G
T
C
3
2
C
T
2
A
T
T
  106,973,808
  106,974,312
  106,974,786
  106,974,788
  106,975,098
  106,975,626
  106,975,785
  106,976,030
  106,976,031
  106,976,776
  106,976,972
  106,976,974
  106,976,976
  106,977,042
  106,977,094
  106,977,182
  106,977,737
  106,978,446
  106,978,619
  106,978,840
  106,978,849
  106,978,854
  106,978,859
  106,979,044
  106,979,131
  106,979,269
  106,979,282
  106,980,271
  106,980,844
  106,981,026
  106,981,057
  106,981,763
  106,982,168
  106,982,253
  106,982,554
  106,983,093
  106,983,437
  106,983,998
  106,984,726
  106,984,786
  106,985,083
  106,985,084
  106,987,002
  106,988,185
  106,988,301
  106,988,987
  106,989,303
  106,989,853
  106,989,955
  106,990,279
  106,990,868
  106,991,239
  106,991,488
  106,991,695
  106,992,714
  106,993,448
  106,993,450
  106,993,613
  106,994,174
  106,994,285
  106,995,044
  106,995,085
  106,995,136
  106,995,963
  106,996,133
  106,996,381
  106,996,391
  106,996,412
  106,996,541
  106,996,674
  106,996,842
  106,997,197
  106,997,223
  106,997,377
  106,997,745
  106,998,266
  106,998,379
  106,998,506
  106,999,479
  106,999,953
  107,000,329
  107,000,374
  107,000,605
  107,000,798
  107,001,457
  107,001,548
  107,001,793
  107,001,995
  107,002,263
  107,002,321
  107,002,383
  107,002,459
  107,003,066
  107,003,535
  107,003,830
  107,003,880
  107,004,008
  107,004,257
  107,004,645
  107,004,687
  107,004,847
  107,004,932
  107,004,966
  107,004,973
  107,005,150
  107,006,037
  107,008,306
  107,008,890
  107,009,177
  107,009,456
  107,009,519
  107,010,360
  107,010,587
  107,010,602
  107,010,866
  107,010,960
  107,011,083
  107,011,100
  107,011,249
  107,011,274
  107,011,347
  107,011,382
  107,011,400
  107,011,402
  107,011,641
  107,012,504
  107,012,824
  107,012,963
  107,013,212
  107,013,314
  107,014,077
  107,014,078
  107,015,319
  107,015,791
  107,016,014
  107,016,316
  107,016,644
  107,020,245
C
G
T
2
T/-
C
3
A
C
C
3
C
C
4
T
-
T
G
G
4
T
T
T
3/7
G
-
15
C
-
A
T
G
C
3
G
T
2
T
2/-
T
?
2/-
-
C
G
C
A
23
C
A
A
T
-
5
-
4/-
2/-
C
G
G
C
2/-
C
T
G
T
C
A
C
-
C
A
2
G
T
A
-
A
C
G
G
T
T
-
C
C
T
-
-
-
G
G
3
G
4/5
G
T
A
-
G
A
A
T
T
G
C
G
C
T
T
A
C
-
G
T
C
-
4
C
A
G
G
-
-
C
C
A
A
A
T
3/-
2/-
T
C
-
A/-
C
3/TA