Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 47,608 (bp)   Positions: 111
Conservation 
Genes ( + ) 
Genes ( - ) 
Genes ( - ) 
Rnor 5.0  
COP/CrCrl (MCW & UW) 
.007
.405
--
--
--
.001
.003
.0
.001
.002
.109
.006
--
--
.111
--
.002
.0
.011
.001
.99
.961
.997
--
--
.129
.048
.027
.031
.001
.004
.01
--
--
.02
.016
.002
.001
.0
.117
.0
--
.009
.01
.0
.0
.003
.0
.002
.001
.0
.024
.001
.021
.011
.014
--
.036
.003
--
.034
--
--
--
.085
.003
.003
.022
.0
.002
.305
.104
.065
.556
.39
.164
.03
.062
.216
.023
.002
.002
.136
.012
.692
.102
.021
.077
.079
.012
.022
.143
.025
.014
.067
.03
.106
.001
.094
.079
.069
.195
.47
.041
.0
.003
.015
.0
.103
.003
.071
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
Timp2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
T
A
C
C
C
T
T
A
T
A
C
T
T
T
A
G
A
T
G
G
A
A
6
T
A
G
A
T
T
A
T
A
3
G
G
A
G
A
A
T
G
T
G
4
A
T
G
C
T
G
T
A
T
G
G
A
6
G
C
T
T
G
G
A
C
C
T
G
A
T
G
C
T
T
G
T
3
C
C
C
T
10
G
T
C
T
A
G
2
T
11
G
G
G
T
C
G
A
2
3
2
G
C
18
T
T
T
T
12
C
T
  106,973,808
  106,974,312
  106,974,786
  106,974,788
  106,974,799
  106,975,626
  106,975,785
  106,976,031
  106,976,047
  106,976,119
  106,976,715
  106,976,776
  106,977,009
  106,977,018
  106,977,280
  106,977,590
  106,978,446
  106,978,619
  106,978,840
  106,978,849
  106,979,044
  106,979,131
  106,979,283
  106,980,271
  106,980,844
  106,981,026
  106,981,763
  106,982,168
  106,982,253
  106,982,554
  106,983,200
  106,983,437
  106,984,726
  106,984,762
  106,984,786
  106,985,083
  106,986,482
  106,988,185
  106,988,301
  106,989,834
  106,990,710
  106,991,695
  106,992,040
  106,993,448
  106,994,174
  106,995,136
  106,997,131
  106,997,223
  106,999,479
  107,000,634
  107,000,713
  107,001,035
  107,001,457
  107,001,659
  107,001,984
  107,001,994
  107,002,263
  107,002,917
  107,003,580
  107,003,830
  107,003,880
  107,004,932
  107,004,966
  107,004,973
  107,005,369
  107,005,787
  107,006,037
  107,007,488
  107,008,306
  107,008,833
  107,009,177
  107,009,456
  107,009,519
  107,010,151
  107,010,195
  107,010,360
  107,010,587
  107,010,602
  107,010,683
  107,010,866
  107,010,960
  107,011,083
  107,011,100
  107,011,249
  107,011,274
  107,011,347
  107,011,382
  107,011,400
  107,011,402
  107,011,641
  107,012,532
  107,012,635
  107,012,824
  107,012,963
  107,013,212
  107,013,314
  107,013,719
  107,013,789
  107,014,075
  107,014,077
  107,014,078
  107,014,212
  107,014,814
  107,015,253
  107,015,791
  107,016,570
  107,016,644
  107,018,449
  107,018,487
  107,019,643
  107,020,245
C
G
T
C/2
T
C
3
C
A
C
T
C
T/2
T/C
G
G/2
G
G
2
T
3
G
-
C
-
A
G
C
3
G
A
2
3/-
G/-
T
3
A
C
G
A
A
5
A
-
G
C
A
2
C
A
C
T
C
A
2
4
-
A
T
5/3
G
A
T
T
T
T
C
A
G
C
T
T
A
C
G/T
C
-
G
T
T
C
-
4
C
A
G
G
-
-
C
-
A
A
A
A
T
A
G
2/-
3/-
-
A
-
-
C
C
C
C
12/-
T
TA/3