Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 31,502 (bp)   Positions: 152
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SBH/Ygl (KNAW) 
.016
.15
.011
.996
.934
--
.123
.812
.024
.733
.0
.001
.0
.0
.024
.0
.003
.003
.001
.0
--
.023
.08
.04
.089
.066
.002
.148
.004
.0
.001
.002
.005
.0
.0
.0
.001
.011
.002
.152
.02
.92
1.0
.0
.0
.012
.0
.375
.003
.0
.064
.001
.031
.305
.099
.927
.016
.152
.149
.0
.987
.05
.003
.065
.103
.156
.174
.195
.2
.0
.0
.0
.0
.0
.0
.001
.65
.034
.011
.008
.002
.0
--
--
--
.017
.767
.077
.004
.027
.015
.058
.042
.004
.037
.324
.12
.043
.491
.005
.004
.165
.024
.004
.0
.158
.017
.008
.039
.049
.5
.806
.022
.005
.523
.006
.194
.047
.125
.067
.516
.001
.014
.0
.007
.219
.0
.037
.202
.197
.003
.016
.0
.001
.008
.794
.022
.0
.001
.0
.001
.0
.0
.001
.0
.0
.0
.092
.0
.09
.001
.005
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
Tgm6
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
C
A
A
A
G
G
T
T
C
C
G
A
C
G
A
T
A
C
G
A
2
2
C
G
G
A
A
G
T
T
T
T
G
G
G
G
G
C
G
G
C
G
A
A
G
2
T
C
A
G
A
T
T
A
G
A
T
T
G
G
G
10
2
2
2
2
2
20
A
T
G
G
C
C
G
C
C
T
G
C
C
T
C
T
C
C
52
44
4
A
T
G
C
G
C
G
G
A
C
2
T
T
G
A
G
A
C
G
C
A
G
T
G
A
G
C
G
G
C
A
C
C
A
T
A
C
C
G
G
T
C
T
G
C
C
G
T
T
C
C
A
A
T
C
A
G
T
G
G
T
C
  129,150,443
  129,153,448
  129,159,962
  129,160,513
  129,160,549
  129,160,854
  129,161,641
  129,162,057
  129,162,649
  129,163,767
  129,163,988
  129,164,708
  129,165,696
  129,165,784
  129,165,999
  129,166,025
  129,166,361
  129,166,375
  129,166,409
  129,166,455
  129,166,924
  129,167,110
  129,167,162
  129,167,284
  129,167,315
  129,167,327
  129,167,495
  129,167,526
  129,167,551
  129,167,589
  129,167,638
  129,167,685
  129,167,693
  129,167,709
  129,167,710
  129,167,767
  129,167,792
  129,167,864
  129,167,894
  129,167,988
  129,168,041
  129,168,297
  129,168,334
  129,168,480
  129,168,656
  129,168,761
  129,168,768
  129,168,868
  129,169,299
  129,169,336
  129,169,638
  129,169,766
  129,169,993
  129,170,034
  129,170,055
  129,170,153
  129,170,183
  129,170,381
  129,170,382
  129,170,460
  129,170,508
  129,171,382
  129,171,726
  129,171,754
  129,171,760
  129,171,772
  129,171,778
  129,171,790
  129,171,796
  129,172,028
  129,172,060
  129,172,079
  129,172,146
  129,172,292
  129,172,538
  129,172,598
  129,172,676
  129,172,974
  129,172,998
  129,173,039
  129,173,078
  129,173,124
  129,173,389
  129,173,391
  129,173,509
  129,173,554
  129,174,487
  129,174,535
  129,174,665
  129,174,875
  129,174,921
  129,174,942
  129,174,953
  129,174,966
  129,175,011
  129,175,108
  129,175,147
  129,175,372
  129,175,482
  129,175,734
  129,175,747
  129,175,798
  129,176,001
  129,176,041
  129,176,079
  129,176,211
  129,176,305
  129,176,395
  129,176,506
  129,176,599
  129,176,714
  129,176,749
  129,176,872
  129,176,878
  129,176,904
  129,176,994
  129,177,107
  129,177,149
  129,177,210
  129,177,308
  129,177,351
  129,177,378
  129,177,509
  129,177,991
  129,178,422
  129,178,682
  129,178,819
  129,179,008
  129,179,027
  129,179,046
  129,179,147
  129,179,237
  129,179,252
  129,179,253
  129,179,667
  129,179,933
  129,180,051
  129,180,288
  129,180,298
  129,180,303
  129,180,308
  129,180,360
  129,180,425
  129,180,437
  129,180,455
  129,180,593
  129,180,646
  129,180,682
  129,180,723
  129,180,739
  129,180,767
  129,180,789
3
A
C
G
T
A
A
C
81
T
2
41
G
G
T
G
G
G
T
A
G
-
-
T
A
A
G
C
A
C
C
C
G
C
A
A
A
A
3
A
A
T
A
15
G
A
-
C
T
G
A
T
A
C
C
A
G
C
C
C
A
A
-
2/-
2/-
-
-
-
-
G
C
A
T
A
G
A
T
A
G
A
A
T
C
A
C
T
T
52/-
-
-
5
29
5
T
T
T
A
A
-
2
-
C
G
2
G
A
G
A
A
T
2
A
C
A
G
A
T
59
A
T
2
T
G
G
C
G
T
T
A
A
C
T
C
A
T
T
A
C
C
T
T
C
G
A
T
G
A
A
A
A
C
T