Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 157,503 (bp)   Positions: 87
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
GK/Ox (KNAW) 
.003
.021
.191
.03
.327
.004
.003
.004
.001
.024
.004
.001
.048
.184
.015
.051
.271
--
.003
.007
.001
.008
.02
.005
.01
.003
.002
--
.924
.001
.011
.002
.008
.041
.009
.014
.118
.845
.071
--
--
.523
.009
.008
.01
.008
--
.003
.0
.014
--
.0
.001
.005
.2
.277
.01
.543
.087
.995
.013
.0
--
.037
.001
.001
.001
.06
.861
.001
1.0
1.0
.071
.078
.001
.985
.001
.861
.341
.208
.01
.011
--
.089
.002
.001
.0
Syn2
Syn2
Syn2
Syn2
Syn2
Syn2
Syn2
Syn2
Syn2
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
Timp4
--
--
--
--
--
--
--
--
--
--
C
T
A
C
2
G
A
A
T
A
G
A
T
4
G
G
T
G
C
C
16
3
A
A
T
A
G
G
A
C
A
C
A
C
A
A
T
100
C
2
T
C
A
3
2
A
T
A
A
C
T
A
12
A
A
A
C
2
C
C
C
T
A
6
A
T
A
G
G
C
C
G
42
T
T
G
T
C
T
G
G
A
C
C
T
G
G
  210,327,618
  210,327,635
  210,328,254
  210,328,645
  210,328,946
  210,329,062
  210,329,841
  210,329,845
  210,330,382
  210,330,744
  210,330,816
  210,331,760
  210,332,198
  210,332,835
  210,334,291
  210,334,985
  210,335,654
  210,336,257
  210,337,272
  210,337,808
  210,338,507
  210,338,888
  210,338,891
  210,341,810
  210,342,804
  210,345,206
  210,348,378
  210,355,027
  210,357,671
  210,362,153
  210,365,001
  210,365,094
  210,366,134
  210,367,490
  210,367,834
  210,368,260
  210,368,882
  210,370,078
  210,374,797
  210,378,515
  210,378,974
  210,407,077
  210,412,961
  210,413,955
  210,413,956
  210,417,110
  210,418,581
  210,419,733
  210,419,947
  210,420,366
  210,421,103
  210,427,190
  210,428,044
  210,429,540
  210,429,761
  210,429,770
  210,430,151
  210,431,179
  210,433,949
  210,434,849
  210,435,806
  210,437,104
  210,438,357
  210,438,559
  210,438,635
  210,438,726
  210,438,933
  210,438,954
  210,442,275
  210,444,078
  210,446,380
  210,446,416
  210,446,948
  210,447,012
  210,447,680
  210,450,494
  210,452,183
  210,453,659
  210,458,434
  210,458,916
  210,464,256
  210,465,804
  210,468,343
  210,468,583
  210,468,594
  210,468,683
  210,479,233
T
C
G
T
-
T
2
G
3
T
A
G
C
-
6
A
2
A
C/2
T
-
-
G
G
T/5
G
A
A
G
A
2
A
G
T
G
G
G
-
T
-
C
T
T
3/-
-
5
-
C
G
T
3
C
-
T
2
C
T
-
T
C/13
T
T/-
C
-
G
C
G
-
A
T
T
A
-
-
23
A
A
T
G
19
A
G
T
T
C
A
3