Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
  Home     Edit Strains     Edit Gene List     Sequence Annotation
 Assembly RGSC_v3.4
   

Chromosome Start Position Stop Position
Region Size: 34,013 (bp)   Positions: 93
Conservation 
Genes ( + ) 
Genes ( - ) 
Rnor 5.0  
SHRSP/Gcrc (KNAW) 
.001
.015
.235
.437
.005
.011
.012
.02
.0
.0
.003
.213
--
--
.001
.008
.012
.0
.02
.014
.003
.033
--
.036
--
--
--
--
1.0
.241
.264
.006
--
--
.747
.755
.004
.008
.022
--
--
--
--
--
--
--
--
--
--
.003
.007
.056
.076
.001
.001
.122
.03
--
.003
.003
.005
.035
--
--
--
--
--
--
.381
.106
--
--
.006
.92
.822
.004
--
--
.003
.252
.315
.002
.205
.998
.039
.242
--
--
.019
.028
--
.623
.039
Scpep1
Scpep1
Scpep1
Scpep1
Scpep1
Scpep1
Scpep1
Scpep1
Scpep1
Scpep1
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
--
G
G
2
A
C
8
T
C
G
A
9
T
T
T
T
T
A
C
A
T
A
T
G
C
T
6
6
17
C
G
A
A
G
G
C
2
C
G
C
T
G
T
T
G
6
T
G
C
8
G
G
2
2
29
27
T
T
C
C
21
C
C
T
G
A
T
A
A
A
T
G
T
G
C
T
C
G
C
G
C
T
2
A
C
T
C
G
G
C
C
C
G
T
  73,846,548
  73,847,731
  73,848,035
  73,848,355
  73,848,820
  73,849,723
  73,849,807
  73,849,808
  73,850,107
  73,851,128
  73,851,301
  73,851,931
  73,852,817
  73,852,837
  73,853,391
  73,853,402
  73,854,020
  73,854,270
  73,854,618
  73,854,621
  73,855,234
  73,855,332
  73,855,396
  73,855,474
  73,855,713
  73,855,734
  73,855,754
  73,855,761
  73,856,161
  73,856,648
  73,856,943
  73,857,202
  73,857,322
  73,857,345
  73,857,533
  73,857,534
  73,857,842
  73,858,033
  73,858,048
  73,858,206
  73,858,262
  73,858,273
  73,858,279
  73,858,281
  73,859,671
  73,859,729
  73,859,733
  73,859,737
  73,859,756
  73,860,055
  73,860,068
  73,860,548
  73,860,689
  73,860,754
  73,860,756
  73,860,785
  73,861,371
  73,861,434
  73,861,758
  73,861,957
  73,862,144
  73,862,367
  73,862,431
  73,862,535
  73,862,799
  73,862,840
  73,863,045
  73,863,047
  73,863,417
  73,863,446
  73,864,688
  73,864,700
  73,867,123
  73,867,601
  73,867,620
  73,868,303
  73,869,523
  73,869,578
  73,869,920
  73,870,284
  73,871,568
  73,871,698
  73,871,894
  73,872,191
  73,872,576
  73,872,660
  73,872,879
  73,872,880
  73,877,318
  73,877,819
  73,878,144
  73,878,756
  73,879,778
A
A
2/-
2
T
-
2
A
A
G
-
C
C
5
-
G
C
T
G
C
G
2
T
15
2
-
-
-
T
A
G
G
T
2
C/7
2/-
T
T
T
C
-
-
-
A
-
G
T
G
-
A
A
-
-
29/-
27/-
T/C
C
A
T
-
T
T
T/C
A
G
T/-
G
T
G
C
T
2
C
T
C
T
13
2
A
C/2
C
-
A/2
T
A
2
T
T
T
9
T
A
10